RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 NEXNQ0ZGT2 675 aa16.94■□□□□ 0.3
LINC00399-201ENST00000439008 UBE3BQ7Z3V4 1068 aa16.94■□□□□ 0.3
LINC00399-201ENST00000439008 LINS1Q8NG48 757 aa16.94■□□□□ 0.3
LINC00399-201ENST00000439008 ATP6V0A2Q9Y487 856 aa16.94■□□□□ 0.3
LINC00399-201ENST00000439008 PDE8AO60658 829 aa16.93■□□□□ 0.3
LINC00399-201ENST00000439008 GRAPQ13588 217 aa16.93■□□□□ 0.3
LINC00399-201ENST00000439008 SOGA3Q5TF21 947 aa16.93■□□□□ 0.3
LINC00399-201ENST00000439008 DDX46Q7L014 1031 aaKnown RBP16.93■□□□□ 0.3
LINC00399-201ENST00000439008 GRAPLQ8TC17 118 aaPredicted RBP16.93■□□□□ 0.3
LINC00399-201ENST00000439008 CCDC85AQ96PX6 553 aaPredicted RBP16.93■□□□□ 0.3
LINC00399-201ENST00000439008 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
LINC00399-201ENST00000439008 RTKN2Q8IZC4 609 aa16.92■□□□□ 0.3
LINC00399-201ENST00000439008 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
LINC00399-201ENST00000439008 KIF3CO14782 793 aa16.91■□□□□ 0.3
LINC00399-201ENST00000439008 BBOX1O75936 387 aa16.91■□□□□ 0.3
LINC00399-201ENST00000439008 TTLL11Q8NHH1 800 aa16.91■□□□□ 0.3
LINC00399-201ENST00000439008 PSMD1Q99460 953 aa16.91■□□□□ 0.3
LINC00399-201ENST00000439008 GPBP1L1Q9HC44 474 aaPredicted RBP16.91■□□□□ 0.3
LINC00399-201ENST00000439008 LTBP1Q14766 1721 aa16.9■□□□□ 0.3
LINC00399-201ENST00000439008 RARSP54136 660 aaKnown RBP16.9■□□□□ 0.3
LINC00399-201ENST00000439008 CTSWP56202 376 aa16.9■□□□□ 0.3
LINC00399-201ENST00000439008 ALDH1L2Q3SY69 923 aa16.9■□□□□ 0.3
LINC00399-201ENST00000439008 SP8Q8IXZ3 490 aa16.9■□□□□ 0.3
LINC00399-201ENST00000439008 SPEF2Q9C093 1822 aa16.89■□□□□ 0.29
LINC00399-201ENST00000439008 EPHA10Q5JZY3 1008 aa16.89■□□□□ 0.29
LINC00399-201ENST00000439008 CC2D2BQ6DHV5 1058 aa16.89■□□□□ 0.29
LINC00399-201ENST00000439008 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
LINC00399-201ENST00000439008 GREM2Q9H772 168 aa16.89■□□□□ 0.29
LINC00399-201ENST00000439008 SMC4Q9NTJ3 1288 aa16.89■□□□□ 0.29
LINC00399-201ENST00000439008 POTECB2RU33 542 aa16.88■□□□□ 0.29
LINC00399-201ENST00000439008 IARSP41252 1262 aaKnown RBP16.88■□□□□ 0.29
LINC00399-201ENST00000439008 RPS8P62241 208 aaKnown RBP16.88■□□□□ 0.29
LINC00399-201ENST00000439008 FOXO4P98177 505 aa16.88■□□□□ 0.29
LINC00399-201ENST00000439008 PLA2G12BQ9BX93 195 aa16.88■□□□□ 0.29
LINC00399-201ENST00000439008 RTFDC1Q9BY42 306 aaPredicted RBP16.88■□□□□ 0.29
LINC00399-201ENST00000439008 GLTPD2A6NH11 291 aa16.87■□□□□ 0.29
LINC00399-201ENST00000439008 WTIPA6NIX2 430 aaPredicted RBP16.87■□□□□ 0.29
LINC00399-201ENST00000439008 CT47B1P0C2W7 299 aaPredicted RBP16.87■□□□□ 0.29
LINC00399-201ENST00000439008 CCDC152Q4G0S7 254 aa16.87■□□□□ 0.29
LINC00399-201ENST00000439008 KAZALD1Q96I82 304 aa16.87■□□□□ 0.29
LINC00399-201ENST00000439008 PTPRCP08575 1304 aa16.87■□□□□ 0.29
LINC00399-201ENST00000439008 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
LINC00399-201ENST00000439008 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
LINC00399-201ENST00000439008 ZC3H4Q9UPT8 1303 aaKnown RBP16.87■□□□□ 0.29
LINC00399-201ENST00000439008 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
LINC00399-201ENST00000439008 CSF1RP07333 972 aa16.86■□□□□ 0.29
LINC00399-201ENST00000439008 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
LINC00399-201ENST00000439008 GPSM2P81274 684 aa16.86■□□□□ 0.29
LINC00399-201ENST00000439008 MPNDQ8N594 471 aa16.86■□□□□ 0.29
LINC00399-201ENST00000439008 RRAGCQ9HB90 399 aa16.86■□□□□ 0.29
LINC00399-201ENST00000439008 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
LINC00399-201ENST00000439008 TNNQ9UQP3 1299 aa16.86■□□□□ 0.29
LINC00399-201ENST00000439008 GRM8O00222 908 aa16.85■□□□□ 0.29
LINC00399-201ENST00000439008 BCAR3O75815 825 aa16.85■□□□□ 0.29
LINC00399-201ENST00000439008 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
LINC00399-201ENST00000439008 NBPF7P0C2Y1 421 aaPredicted RBP16.85■□□□□ 0.29
LINC00399-201ENST00000439008 AOC3Q16853 763 aa16.85■□□□□ 0.29
LINC00399-201ENST00000439008 FAM161AQ3B820 660 aa16.85■□□□□ 0.29
LINC00399-201ENST00000439008 GPR101Q96P66 508 aaPredicted RBP16.85■□□□□ 0.29
LINC00399-201ENST00000439008 SRCIN1Q9C0H9 1055 aa16.85■□□□□ 0.29
LINC00399-201ENST00000439008 POLLQ9UGP5 575 aa16.85■□□□□ 0.29
LINC00399-201ENST00000439008 RTL9Q8NET4 1388 aa16.85■□□□□ 0.29
LINC00399-201ENST00000439008 WDR90Q96KV7 1748 aa16.84■□□□□ 0.29
LINC00399-201ENST00000439008 FZD9O00144 591 aa16.84■□□□□ 0.29
LINC00399-201ENST00000439008 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
LINC00399-201ENST00000439008 DPP8Q6V1X1 898 aaPredicted RBP16.84■□□□□ 0.29
LINC00399-201ENST00000439008 UTYO14607 1347 aa16.83■□□□□ 0.28
LINC00399-201ENST00000439008 GRIPAP1Q4V328 841 aa16.83■□□□□ 0.28
LINC00399-201ENST00000439008 TMC4Q7Z404 712 aa16.83■□□□□ 0.28
LINC00399-201ENST00000439008 SUCLG2Q96I99 432 aa16.83■□□□□ 0.28
LINC00399-201ENST00000439008 USP44Q9H0E7 712 aa16.83■□□□□ 0.28
LINC00399-201ENST00000439008 KDM2BQ8NHM5 1336 aa16.82■□□□□ 0.28
LINC00399-201ENST00000439008 PPIP5K2O43314 1243 aa16.82■□□□□ 0.28
LINC00399-201ENST00000439008 C1QTNF8P60827 252 aa16.82■□□□□ 0.28
LINC00399-201ENST00000439008 LARGE2Q8N3Y3 721 aa16.82■□□□□ 0.28
LINC00399-201ENST00000439008 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
LINC00399-201ENST00000439008 ITGA6P23229 1130 aa16.81■□□□□ 0.28
LINC00399-201ENST00000439008 KIAA2012Q0VF49 1180 aa16.81■□□□□ 0.28
LINC00399-201ENST00000439008 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
LINC00399-201ENST00000439008 ANKRD18AQ8IVF6 992 aa16.81■□□□□ 0.28
LINC00399-201ENST00000439008 C9orf78Q9NZ63 289 aaPredicted RBP16.81■□□□□ 0.28
LINC00399-201ENST00000439008 CEP350Q5VT06 3117 aa16.81■□□□□ 0.28
LINC00399-201ENST00000439008 A0A1B0GUL6 1792 aa16.8■□□□□ 0.28
LINC00399-201ENST00000439008 TBC1D16Q8TBP0 767 aa16.8■□□□□ 0.28
LINC00399-201ENST00000439008 PODXL2Q9NZ53 605 aa16.8■□□□□ 0.28
LINC00399-201ENST00000439008 MINPP1Q9UNW1 487 aa16.8■□□□□ 0.28
LINC00399-201ENST00000439008 SCN9AQ15858 1988 aa16.8■□□□□ 0.28
LINC00399-201ENST00000439008 YDJCA8MPS7 323 aa16.79■□□□□ 0.28
LINC00399-201ENST00000439008 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
LINC00399-201ENST00000439008 ANKRD44Q8N8A2 993 aa16.79■□□□□ 0.28
LINC00399-201ENST00000439008 ZNF594Q96JF6 807 aaPredicted RBP16.79■□□□□ 0.28
LINC00399-201ENST00000439008 CDC5LQ99459 802 aaKnown RBP16.79■□□□□ 0.28
LINC00399-201ENST00000439008 BSDC1Q9NW68 430 aaPredicted RBP16.79■□□□□ 0.28
LINC00399-201ENST00000439008 RIMBP2O15034 1052 aa16.78■□□□□ 0.28
LINC00399-201ENST00000439008 SUPT20HQ8NEM7 779 aa16.78■□□□□ 0.28
LINC00399-201ENST00000439008 JDP2Q8WYK2 163 aa16.78■□□□□ 0.28
LINC00399-201ENST00000439008 TMX4Q9H1E5 349 aaPredicted RBP16.78■□□□□ 0.28
LINC00399-201ENST00000439008 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
LINC00399-201ENST00000439008 BICC1Q9H694 974 aaKnown RBP16.78■□□□□ 0.28
LINC00399-201ENST00000439008 KCNQ5Q9NR82 932 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms