RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 USP50Q70EL3 339 aaPredicted RBP20.99■□□□□ 0.95
ACTB-205ENST00000432588 TNS4Q8IZW8 715 aa20.99■□□□□ 0.95
ACTB-205ENST00000432588 ISCA1Q9BUE6 129 aa20.99■□□□□ 0.95
ACTB-205ENST00000432588 IFT57Q9NWB7 429 aa20.99■□□□□ 0.95
ACTB-205ENST00000432588 LAMB2P55268 1798 aa20.99■□□□□ 0.95
ACTB-205ENST00000432588 ATP5J2-PTCD1G3V325 749 aa20.98■□□□□ 0.95
ACTB-205ENST00000432588 ZNF853P0CG23 659 aa20.98■□□□□ 0.95
ACTB-205ENST00000432588 GOLGA2Q08379 1002 aa20.97■□□□□ 0.95
ACTB-205ENST00000432588 KIAA2012Q0VF49 1180 aa20.97■□□□□ 0.95
ACTB-205ENST00000432588 ZNF428Q96B54 188 aa20.97■□□□□ 0.95
ACTB-205ENST00000432588 FAM89AQ96GI7 184 aa20.97■□□□□ 0.95
ACTB-205ENST00000432588 CHMP4AQ9BY43 222 aa20.97■□□□□ 0.95
ACTB-205ENST00000432588 CXCL9Q07325 125 aa20.96■□□□□ 0.95
ACTB-205ENST00000432588 TRIM28Q13263 835 aaKnown RBP20.96■□□□□ 0.95
ACTB-205ENST00000432588 RIC3Q7Z5B4 369 aa20.96■□□□□ 0.95
ACTB-205ENST00000432588 ADARB2Q9NS39 739 aaKnown RBP20.96■□□□□ 0.95
ACTB-205ENST00000432588 GPRC5DQ9NZD1 345 aa20.96■□□□□ 0.95
ACTB-205ENST00000432588 LTBP1Q14766 1721 aa20.95■□□□□ 0.94
ACTB-205ENST00000432588 VEGFBP49765 207 aa20.95■□□□□ 0.94
ACTB-205ENST00000432588 TNIP1Q15025 636 aa20.95■□□□□ 0.94
ACTB-205ENST00000432588 SF3B3Q15393 1217 aaKnown RBP20.95■□□□□ 0.94
ACTB-205ENST00000432588 RASSF10A6NK89 507 aa20.94■□□□□ 0.94
ACTB-205ENST00000432588 HSP90B1P14625 803 aaKnown RBP20.94■□□□□ 0.94
ACTB-205ENST00000432588 CIAPIN1Q6FI81 312 aa20.94■□□□□ 0.94
ACTB-205ENST00000432588 AIDAQ96BJ3 306 aa20.94■□□□□ 0.94
ACTB-205ENST00000432588 ABT1Q9ULW3 272 aaKnown RBP20.94■□□□□ 0.94
ACTB-205ENST00000432588 CDHR2Q9BYE9 1310 aa20.94■□□□□ 0.94
ACTB-205ENST00000432588 ELL2O00472 640 aaPredicted RBP20.93■□□□□ 0.94
ACTB-205ENST00000432588 GMPSP49915 693 aaPredicted RBP20.93■□□□□ 0.94
ACTB-205ENST00000432588 DEFB115Q30KQ5 88 aa20.93■□□□□ 0.94
ACTB-205ENST00000432588 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
ACTB-205ENST00000432588 BCL2L13Q9BXK5 485 aa20.93■□□□□ 0.94
ACTB-205ENST00000432588 DDX60Q8IY21 1712 aaKnown RBP20.92■□□□□ 0.94
ACTB-205ENST00000432588 IRS4O14654 1257 aaPredicted RBP20.92■□□□□ 0.94
ACTB-205ENST00000432588 RAD17O75943 681 aa20.91■□□□□ 0.94
ACTB-205ENST00000432588 ZBTB38Q8NAP3 1195 aaPredicted RBP20.91■□□□□ 0.94
ACTB-205ENST00000432588 CELF1Q92879 486 aaKnown RBP20.91■□□□□ 0.94
ACTB-205ENST00000432588 PHAXQ9H814 394 aaKnown RBP20.91■□□□□ 0.94
ACTB-205ENST00000432588 NSFL1CQ9UNZ2 370 aaKnown RBP20.91■□□□□ 0.94
ACTB-205ENST00000432588 LRRC37AA6NMS7 1700 aa20.9■□□□□ 0.94
ACTB-205ENST00000432588 DDX58O95786 925 aaKnown RBP20.9■□□□□ 0.94
ACTB-205ENST00000432588 WASHC4Q2M389 1173 aa20.9■□□□□ 0.94
ACTB-205ENST00000432588 CCDC30Q5VVM6 783 aa20.9■□□□□ 0.94
ACTB-205ENST00000432588 C6orf229H3BNL8 230 aa20.89■□□□□ 0.93
ACTB-205ENST00000432588 FOXN1O15353 648 aa20.89■□□□□ 0.93
ACTB-205ENST00000432588 CCDC191Q8NCU4 936 aa20.89■□□□□ 0.93
ACTB-205ENST00000432588 MYD88Q99836 296 aa20.89■□□□□ 0.93
ACTB-205ENST00000432588 DUOX1Q9NRD9 1551 aa20.89■□□□□ 0.93
ACTB-205ENST00000432588 TAF1P21675 1872 aa20.88■□□□□ 0.93
ACTB-205ENST00000432588 WDR33Q9C0J8 1336 aaKnown RBP20.88■□□□□ 0.93
ACTB-205ENST00000432588 CTCFP49711 727 aaPredicted RBP20.88■□□□□ 0.93
ACTB-205ENST00000432588 RPS8P62241 208 aaKnown RBP20.88■□□□□ 0.93
ACTB-205ENST00000432588 C8orf58Q8NAV2 365 aa20.88■□□□□ 0.93
ACTB-205ENST00000432588 EYA3Q99504 573 aa20.88■□□□□ 0.93
ACTB-205ENST00000432588 YDJCA8MPS7 323 aa20.87■□□□□ 0.93
ACTB-205ENST00000432588 H7C1D1 291 aa20.87■□□□□ 0.93
ACTB-205ENST00000432588 TRAF5O00463 557 aa20.87■□□□□ 0.93
ACTB-205ENST00000432588 CAPN15O75808 1086 aa20.87■□□□□ 0.93
ACTB-205ENST00000432588 ZC3H15Q8WU90 426 aaKnown RBP20.87■□□□□ 0.93
ACTB-205ENST00000432588 WBP1LQ9NX94 342 aa20.87■□□□□ 0.93
ACTB-205ENST00000432588 CWC25Q9NXE8 425 aaPredicted RBP20.87■□□□□ 0.93
ACTB-205ENST00000432588 ECE1P42892 770 aa20.86■□□□□ 0.93
ACTB-205ENST00000432588 GPSM2P81274 684 aa20.86■□□□□ 0.93
ACTB-205ENST00000432588 MAP2K1Q02750 393 aaPredicted RBP20.86■□□□□ 0.93
ACTB-205ENST00000432588 FMR1Q06787 632 aaKnown RBP eCLIP20.86■□□□□ 0.931e-72■□□□□ 8.3
ACTB-205ENST00000432588 CCDC152Q4G0S7 254 aa20.86■□□□□ 0.93
ACTB-205ENST00000432588 PAXIP1Q6ZW49 1069 aaPredicted RBP20.86■□□□□ 0.93
ACTB-205ENST00000432588 PRDM10Q9NQV6 1147 aa20.86■□□□□ 0.93
ACTB-205ENST00000432588 CNOT7Q9UIV1 285 aaKnown RBP20.86■□□□□ 0.93
ACTB-205ENST00000432588 RIMBP2O15034 1052 aa20.85■□□□□ 0.93
ACTB-205ENST00000432588 PCCAP05165 728 aaPredicted RBP20.85■□□□□ 0.93
ACTB-205ENST00000432588 CST9Q5W186 159 aa20.85■□□□□ 0.93
ACTB-205ENST00000432588 METTL22Q9BUU2 404 aaPredicted RBP20.85■□□□□ 0.93
ACTB-205ENST00000432588 DBNDD1Q9H9R9 158 aa20.85■□□□□ 0.93
ACTB-205ENST00000432588 POLLQ9UGP5 575 aa20.85■□□□□ 0.93
ACTB-205ENST00000432588 PGAP2Q9UHJ9 254 aa20.85■□□□□ 0.93
ACTB-205ENST00000432588 MICALL2Q8IY33 904 aa20.84■□□□□ 0.93
ACTB-205ENST00000432588 DPF2Q92785 391 aa20.84■□□□□ 0.93
ACTB-205ENST00000432588 STK31Q9BXU1 1019 aa20.84■□□□□ 0.93
ACTB-205ENST00000432588 PDE8AO60658 829 aa20.83■□□□□ 0.93
ACTB-205ENST00000432588 CCDC27Q2M243 656 aa20.83■□□□□ 0.93
ACTB-205ENST00000432588 CAPNS2Q96L46 248 aa20.83■□□□□ 0.93
ACTB-205ENST00000432588 ANKIB1Q9P2G1 1089 aa20.83■□□□□ 0.93
ACTB-205ENST00000432588 TLL2Q9Y6L7 1015 aa20.83■□□□□ 0.93
ACTB-205ENST00000432588 TRPM7Q96QT4 1865 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 PSMD14O00487 310 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 ECE2O60344 883 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 CELF2O95319 508 aaKnown RBP20.82■□□□□ 0.92
ACTB-205ENST00000432588 RPS12P25398 132 aaKnown RBP20.82■□□□□ 0.92
ACTB-205ENST00000432588 TSPYL6Q8N831 410 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 TBC1D16Q8TBP0 767 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 TRPM4Q8TD43 1214 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 GLIS2Q9BZE0 524 aaPredicted RBP20.82■□□□□ 0.92
ACTB-205ENST00000432588 ZC3H12CQ9C0D7 883 aaKnown RBP20.82■□□□□ 0.92
ACTB-205ENST00000432588 SEC31BQ9NQW1 1179 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 MAP3K2Q9Y2U5 619 aa20.82■□□□□ 0.92
ACTB-205ENST00000432588 ZBTB12Q9Y330 459 aaPredicted RBP20.82■□□□□ 0.92
ACTB-205ENST00000432588 G3V3G9 751 aa20.81■□□□□ 0.92
ACTB-205ENST00000432588 HIRAP54198 1017 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms