RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 RAD17O75943 681 aa18.54■□□□□ 0.56
SMARCE1-205ENST00000431889 CXCL9Q07325 125 aa18.54■□□□□ 0.56
SMARCE1-205ENST00000431889 PNMA8AQ86V59 439 aaPredicted RBP18.54■□□□□ 0.56
SMARCE1-205ENST00000431889 MPNDQ8N594 471 aa18.54■□□□□ 0.56
SMARCE1-205ENST00000431889 PLBD2Q8NHP8 589 aa18.54■□□□□ 0.56
SMARCE1-205ENST00000431889 CFAP44Q96MT7 982 aa18.54■□□□□ 0.56
SMARCE1-205ENST00000431889 GPR101Q96P66 508 aaPredicted RBP18.54■□□□□ 0.56
SMARCE1-205ENST00000431889 DBF4Q9UBU7 674 aaPredicted RBP18.54■□□□□ 0.56
SMARCE1-205ENST00000431889 SHTN1A0MZ66 631 aa18.53■□□□□ 0.56
SMARCE1-205ENST00000431889 GRM1Q13255 1194 aa18.53■□□□□ 0.56
SMARCE1-205ENST00000431889 GRAPQ13588 217 aa18.53■□□□□ 0.56
SMARCE1-205ENST00000431889 GRAPLQ8TC17 118 aaPredicted RBP18.53■□□□□ 0.56
SMARCE1-205ENST00000431889 CELF1Q92879 486 aaKnown RBP18.53■□□□□ 0.56
SMARCE1-205ENST00000431889 FOXN1O15353 648 aa18.52■□□□□ 0.56
SMARCE1-205ENST00000431889 SP8Q8IXZ3 490 aa18.52■□□□□ 0.56
SMARCE1-205ENST00000431889 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.56
SMARCE1-205ENST00000431889 ABT1Q9ULW3 272 aaKnown RBP18.52■□□□□ 0.56
SMARCE1-205ENST00000431889 RIMBP2O15034 1052 aa18.51■□□□□ 0.55
SMARCE1-205ENST00000431889 BBOX1O75936 387 aa18.51■□□□□ 0.55
SMARCE1-205ENST00000431889 GMPSP49915 693 aaPredicted RBP18.51■□□□□ 0.55
SMARCE1-205ENST00000431889 C8orf58Q8NAV2 365 aa18.51■□□□□ 0.55
SMARCE1-205ENST00000431889 CCDC85AQ96PX6 553 aaPredicted RBP18.51■□□□□ 0.55
SMARCE1-205ENST00000431889 RIC3Q7Z5B4 369 aa18.51■□□□□ 0.55
SMARCE1-205ENST00000431889 ZNRF3Q9ULT6 936 aa18.51■□□□□ 0.55
SMARCE1-205ENST00000431889 DUOX1Q9NRD9 1551 aa18.5■□□□□ 0.55
SMARCE1-205ENST00000431889 YDJCA8MPS7 323 aa18.5■□□□□ 0.55
SMARCE1-205ENST00000431889 ZNF853P0CG23 659 aa18.5■□□□□ 0.55
SMARCE1-205ENST00000431889 GRIPAP1Q4V328 841 aa18.5■□□□□ 0.55
SMARCE1-205ENST00000431889 PAXIP1Q6ZW49 1069 aaPredicted RBP18.5■□□□□ 0.55
SMARCE1-205ENST00000431889 MYD88Q99836 296 aa18.5■□□□□ 0.55
SMARCE1-205ENST00000431889 GPRC5DQ9NZD1 345 aa18.5■□□□□ 0.55
SMARCE1-205ENST00000431889 DLK2Q6UY11 383 aa18.49■□□□□ 0.55
SMARCE1-205ENST00000431889 RTFDC1Q9BY42 306 aaPredicted RBP18.49■□□□□ 0.55
SMARCE1-205ENST00000431889 HYPKQ9NX55 129 aa18.49■□□□□ 0.55
SMARCE1-205ENST00000431889 NSFL1CQ9UNZ2 370 aaKnown RBP18.49■□□□□ 0.55
SMARCE1-205ENST00000431889 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
SMARCE1-205ENST00000431889 IRS4O14654 1257 aaPredicted RBP18.48■□□□□ 0.55
SMARCE1-205ENST00000431889 DEFB115Q30KQ5 88 aa18.48■□□□□ 0.55
SMARCE1-205ENST00000431889 TSPYL6Q8N831 410 aa18.48■□□□□ 0.55
SMARCE1-205ENST00000431889 SUPT20HQ8NEM7 779 aa18.48■□□□□ 0.55
SMARCE1-205ENST00000431889 TSR2Q969E8 191 aaKnown RBP18.48■□□□□ 0.55
SMARCE1-205ENST00000431889 DBNDD1Q9H9R9 158 aa18.48■□□□□ 0.55
SMARCE1-205ENST00000431889 HOXB7P09629 217 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 GPSM2P81274 684 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 KIAA2012Q0VF49 1180 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 DOK7Q18PE1 504 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 CIAPIN1Q6FI81 312 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 BCL2L13Q9BXK5 485 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 SEC31BQ9NQW1 1179 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 KCNQ5Q9NR82 932 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 C6orf229H3BNL8 230 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 CST9Q5W186 159 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 TRPM4Q8TD43 1214 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 GLIS2Q9BZE0 524 aaPredicted RBP18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 ZNF408Q9H9D4 720 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 IFT57Q9NWB7 429 aa18.47■□□□□ 0.55
SMARCE1-205ENST00000431889 LRRC37AA6NMS7 1700 aa18.46■□□□□ 0.55
SMARCE1-205ENST00000431889 TRPM7Q96QT4 1865 aa18.46■□□□□ 0.55
SMARCE1-205ENST00000431889 HIRAP54198 1017 aaPredicted RBP18.46■□□□□ 0.55
SMARCE1-205ENST00000431889 GOLGA2Q08379 1002 aa18.46■□□□□ 0.55
SMARCE1-205ENST00000431889 CYP4F22Q6NT55 531 aa18.46■□□□□ 0.55
SMARCE1-205ENST00000431889 USP50Q70EL3 339 aaPredicted RBP18.46■□□□□ 0.55
SMARCE1-205ENST00000431889 ADARB2Q9NS39 739 aaKnown RBP18.46■□□□□ 0.55
SMARCE1-205ENST00000431889 POLLQ9UGP5 575 aa18.46■□□□□ 0.55
SMARCE1-205ENST00000431889 WDR33Q9C0J8 1336 aaKnown RBP18.45■□□□□ 0.54
SMARCE1-205ENST00000431889 GNAI1P63096 354 aa18.45■□□□□ 0.54
SMARCE1-205ENST00000431889 RASSF10A6NK89 507 aa18.44■□□□□ 0.54
SMARCE1-205ENST00000431889 SF3B3Q15393 1217 aaKnown RBP18.44■□□□□ 0.54
SMARCE1-205ENST00000431889 WASHC4Q2M389 1173 aa18.44■□□□□ 0.54
SMARCE1-205ENST00000431889 SALL2Q9Y467 1007 aaPredicted RBP18.44■□□□□ 0.54
SMARCE1-205ENST00000431889 LBX1P52954 281 aa18.43■□□□□ 0.54
SMARCE1-205ENST00000431889 AIDAQ96BJ3 306 aa18.43■□□□□ 0.54
SMARCE1-205ENST00000431889 PSMD14O00487 310 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 EGFRP00533 1210 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 RBM26Q5T8P6 1007 aaKnown RBP18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 SAMD7Q7Z3H4 446 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 VPS33BQ9H267 617 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 CNOT7Q9UIV1 285 aaKnown RBP18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 SPEF2Q9C093 1822 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 AOC2O75106 756 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 TNIP1Q15025 636 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 MICALL2Q8IY33 904 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 ZBTB38Q8NAP3 1195 aaPredicted RBP18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 TSKSQ9UJT2 592 aa18.42■□□□□ 0.54
SMARCE1-205ENST00000431889 CELF2O95319 508 aaKnown RBP18.41■□□□□ 0.54
SMARCE1-205ENST00000431889 RPS8P62241 208 aaKnown RBP18.41■□□□□ 0.54
SMARCE1-205ENST00000431889 TBC1D10BQ4KMP7 808 aaPredicted RBP18.41■□□□□ 0.54
SMARCE1-205ENST00000431889 CAPNS2Q96L46 248 aa18.41■□□□□ 0.54
SMARCE1-205ENST00000431889 WBP1LQ9NX94 342 aa18.41■□□□□ 0.54
SMARCE1-205ENST00000431889 MAP3K2Q9Y2U5 619 aa18.41■□□□□ 0.54
SMARCE1-205ENST00000431889 SCN9AQ15858 1988 aa18.4■□□□□ 0.54
SMARCE1-205ENST00000431889 WTIPA6NIX2 430 aaPredicted RBP18.4■□□□□ 0.54
SMARCE1-205ENST00000431889 ECE2O60344 883 aa18.4■□□□□ 0.54
SMARCE1-205ENST00000431889 TBC1D16Q8TBP0 767 aa18.4■□□□□ 0.54
SMARCE1-205ENST00000431889 POLR2AP24928 1970 aaKnown RBP18.4■□□□□ 0.54
SMARCE1-205ENST00000431889 CALD1Q05682 793 aaKnown RBP18.39■□□□□ 0.53
SMARCE1-205ENST00000431889 TRIM28Q13263 835 aaKnown RBP18.39■□□□□ 0.53
SMARCE1-205ENST00000431889 G2E3Q7L622 706 aa18.39■□□□□ 0.53
SMARCE1-205ENST00000431889 CWC25Q9NXE8 425 aaPredicted RBP18.39■□□□□ 0.53
SMARCE1-205ENST00000431889 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms