RNA–Protein interactions for RNA: ENST00000429205.6

SENP3-202, Transcript of SUMO specific peptidase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SENP3, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-202ENST00000429205 HS1BP3Q53T59 392 aa16.19■□□□□ 0.18
SENP3-202ENST00000429205 UBE3BQ7Z3V4 1068 aa16.19■□□□□ 0.18
SENP3-202ENST00000429205 SPATA31A6Q5VVP1 1343 aa16.19■□□□□ 0.18
SENP3-202ENST00000429205 A0A087WZG4 1122 aa16.19■□□□□ 0.18
SENP3-202ENST00000429205 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
SENP3-202ENST00000429205 GPATCH11Q8N954 259 aa16.19■□□□□ 0.18
SENP3-202ENST00000429205 KIF1BPQ96EK5 621 aa16.19■□□□□ 0.18
SENP3-202ENST00000429205 PANK2Q9BZ23 570 aa16.19■□□□□ 0.18
SENP3-202ENST00000429205 C22orf23Q9BZE7 217 aa16.19■□□□□ 0.18
SENP3-202ENST00000429205 ANAPC15P60006 121 aa16.18■□□□□ 0.18
SENP3-202ENST00000429205 NBPF9Q3BBW0 867 aa16.18■□□□□ 0.18
SENP3-202ENST00000429205 HSP90AB4PQ58FF6 505 aa16.18■□□□□ 0.18
SENP3-202ENST00000429205 CYP19A1P11511 503 aaPredicted RBP16.18■□□□□ 0.18
SENP3-202ENST00000429205 OS9Q13438 667 aaPredicted RBP16.18■□□□□ 0.18
SENP3-202ENST00000429205 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
SENP3-202ENST00000429205 MEX3CQ5U5Q3 659 aaKnown RBP16.18■□□□□ 0.18
SENP3-202ENST00000429205 ZSCAN30Q86W11 494 aa16.18■□□□□ 0.18
SENP3-202ENST00000429205 BSDC1Q9NW68 430 aaPredicted RBP16.18■□□□□ 0.18
SENP3-202ENST00000429205 USP21Q9UK80 565 aa16.18■□□□□ 0.18
SENP3-202ENST00000429205 NUTM1Q86Y26 1132 aa16.17■□□□□ 0.18
SENP3-202ENST00000429205 CGNQ9P2M7 1197 aaKnown RBP16.17■□□□□ 0.18
SENP3-202ENST00000429205 NUP188Q5SRE5 1749 aa16.17■□□□□ 0.18
SENP3-202ENST00000429205 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.17■□□□□ 0.18
SENP3-202ENST00000429205 CASP7P55210 303 aa16.17■□□□□ 0.18
SENP3-202ENST00000429205 CTR9Q6PD62 1173 aa16.17■□□□□ 0.18
SENP3-202ENST00000429205 STAP2Q9UGK3 403 aa16.17■□□□□ 0.18
SENP3-202ENST00000429205 SH3BP1Q9Y3L3 701 aa16.17■□□□□ 0.18
SENP3-202ENST00000429205 CWC25Q9NXE8 425 aaPredicted RBP16.16■□□□□ 0.18
SENP3-202ENST00000429205 KIF3AQ9Y496 699 aa16.16■□□□□ 0.18
SENP3-202ENST00000429205 H7C1W4 665 aa16.15■□□□□ 0.18
SENP3-202ENST00000429205 BANK1Q8NDB2 785 aa16.15■□□□□ 0.18
SENP3-202ENST00000429205 KLHDC4Q8TBB5 520 aa16.15■□□□□ 0.18
SENP3-202ENST00000429205 RBM28Q9NW13 759 aaKnown RBP16.15■□□□□ 0.18
SENP3-202ENST00000429205 ZBTB1Q9Y2K1 713 aa16.15■□□□□ 0.18
SENP3-202ENST00000429205 KCNQ2O43526 872 aa16.14■□□□□ 0.17
SENP3-202ENST00000429205 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
SENP3-202ENST00000429205 COL15A1P39059 1388 aa16.14■□□□□ 0.17
SENP3-202ENST00000429205 TJP1Q07157 1748 aa16.14■□□□□ 0.17
SENP3-202ENST00000429205 RABL6Q3YEC7 729 aaPredicted RBP16.14■□□□□ 0.17
SENP3-202ENST00000429205 KIF6Q6ZMV9 814 aa16.14■□□□□ 0.17
SENP3-202ENST00000429205 TIGD1Q96MW7 591 aa16.14■□□□□ 0.17
SENP3-202ENST00000429205 SIL1Q9H173 461 aa16.14■□□□□ 0.17
SENP3-202ENST00000429205 GABPB1Q06547 395 aaPredicted RBP16.13■□□□□ 0.17
SENP3-202ENST00000429205 TCIRG1Q13488 830 aa16.13■□□□□ 0.17
SENP3-202ENST00000429205 UQCRHLA0A096LP55 91 aa16.13■□□□□ 0.17
SENP3-202ENST00000429205 ZNF500O60304 480 aaPredicted RBP16.13■□□□□ 0.17
SENP3-202ENST00000429205 UQCRHP07919 91 aa16.13■□□□□ 0.17
SENP3-202ENST00000429205 G3BP1Q13283 466 aaKnown RBP eCLIP16.13■□□□□ 0.17
SENP3-202ENST00000429205 ERC1Q8IUD2 1116 aa16.13■□□□□ 0.17
SENP3-202ENST00000429205 MYCBPQ99417 103 aaPredicted RBP16.13■□□□□ 0.17
SENP3-202ENST00000429205 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
SENP3-202ENST00000429205 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.13■□□□□ 0.17
SENP3-202ENST00000429205 SASH1O94885 1247 aa16.12■□□□□ 0.17
SENP3-202ENST00000429205 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
SENP3-202ENST00000429205 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
SENP3-202ENST00000429205 TBC1D2Q9BYX2 928 aa16.12■□□□□ 0.17
SENP3-202ENST00000429205 PRDM16Q9HAZ2 1276 aa16.12■□□□□ 0.17
SENP3-202ENST00000429205 CEP83Q9Y592 693 aa16.12■□□□□ 0.17
SENP3-202ENST00000429205 AOX1Q06278 1338 aa16.12■□□□□ 0.17
SENP3-202ENST00000429205 LOC102724428A0A0B4J2F2 783 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 MCM4P33991 863 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 ATP6V1AP38606 617 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 RFX5P48382 616 aaPredicted RBP16.11■□□□□ 0.17
SENP3-202ENST00000429205 SIK1P57059 783 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 MAP3K15Q6ZN16 1313 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 FOXO4P98177 505 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 LMBR1LQ6UX01 489 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 CREBRFQ8IUR6 639 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 PI4K2BQ8TCG2 481 aa16.11■□□□□ 0.17
SENP3-202ENST00000429205 TRIM6-TRIM34B2RNG4 842 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 MAP2K1Q02750 393 aaPredicted RBP16.1■□□□□ 0.17
SENP3-202ENST00000429205 PTPN12Q05209 780 aaKnown RBP16.1■□□□□ 0.17
SENP3-202ENST00000429205 HLFQ16534 295 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 PPP1R9BQ96SB3 815 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 GZF1Q9H116 711 aaPredicted RBP16.1■□□□□ 0.17
SENP3-202ENST00000429205 COPRSQ9NQ92 184 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 AFF2P51816 1311 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 PALLDQ8WX93 1383 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
SENP3-202ENST00000429205 FAM182BQ5T319 152 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 CASC1Q6TDU7 716 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 SASS6Q6UVJ0 657 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 GIGYF2Q6Y7W6 1299 aaKnown RBP16.1■□□□□ 0.17
SENP3-202ENST00000429205 RILPL2Q969X0 211 aa16.1■□□□□ 0.17
SENP3-202ENST00000429205 IL6STP40189 918 aaPredicted RBP16.09■□□□□ 0.17
SENP3-202ENST00000429205 KCNJ4P48050 445 aa16.09■□□□□ 0.17
SENP3-202ENST00000429205 ITPK1Q13572 414 aa16.09■□□□□ 0.17
SENP3-202ENST00000429205 GRPEL1Q9HAV7 217 aa16.09■□□□□ 0.17
SENP3-202ENST00000429205 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
SENP3-202ENST00000429205 INTS5Q6P9B9 1019 aaKnown RBP16.09■□□□□ 0.17
SENP3-202ENST00000429205 AACSQ86V21 672 aa16.09■□□□□ 0.17
SENP3-202ENST00000429205 CERS3Q8IU89 383 aa16.09■□□□□ 0.17
SENP3-202ENST00000429205 CALCOCO1Q9P1Z2 691 aa16.09■□□□□ 0.17
SENP3-202ENST00000429205 TBC1D2BQ9UPU7 963 aa16.09■□□□□ 0.17
SENP3-202ENST00000429205 MAP4K4O95819 1239 aaPredicted RBP16.08■□□□□ 0.16
SENP3-202ENST00000429205 IFIT2P09913 472 aaKnown RBP16.08■□□□□ 0.16
SENP3-202ENST00000429205 MCM5P33992 734 aa16.08■□□□□ 0.16
SENP3-202ENST00000429205 CRKLP46109 303 aaKnown RBP16.08■□□□□ 0.16
SENP3-202ENST00000429205 EAF2Q96CJ1 260 aaPredicted RBP16.08■□□□□ 0.16
SENP3-202ENST00000429205 NCAPGQ9BPX3 1015 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms