RNA–Protein interactions for RNA: ENST00000428946.5

LRRC23-204, Transcript of leucine rich repeat containing 23, humanhuman

TSL 3

Gene LRRC23, Length 969 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC23-204ENST00000428946 FAM89AQ96GI7 184 aa23.52■■□□□ 1.36
LRRC23-204ENST00000428946 TMX4Q9H1E5 349 aaPredicted RBP23.52■■□□□ 1.36
LRRC23-204ENST00000428946 LRRC37AA6NMS7 1700 aa23.51■■□□□ 1.35
LRRC23-204ENST00000428946 GRIPAP1Q4V328 841 aa23.51■■□□□ 1.35
LRRC23-204ENST00000428946 DDX46Q7L014 1031 aaKnown RBP23.51■■□□□ 1.35
LRRC23-204ENST00000428946 NIM1KQ8IY84 436 aa23.51■■□□□ 1.35
LRRC23-204ENST00000428946 EXOSC9Q06265 439 aaKnown RBP23.5■■□□□ 1.35
LRRC23-204ENST00000428946 GOLGA2Q08379 1002 aa23.5■■□□□ 1.35
LRRC23-204ENST00000428946 GRAPQ13588 217 aa23.5■■□□□ 1.35
LRRC23-204ENST00000428946 RIC3Q7Z5B4 369 aa23.5■■□□□ 1.35
LRRC23-204ENST00000428946 JMYQ8N9B5 988 aa23.5■■□□□ 1.35
LRRC23-204ENST00000428946 GRAPLQ8TC17 118 aaPredicted RBP23.5■■□□□ 1.35
LRRC23-204ENST00000428946 CHMP4AQ9BY43 222 aa23.5■■□□□ 1.35
LRRC23-204ENST00000428946 DUOX1Q9NRD9 1551 aa23.49■■□□□ 1.35
LRRC23-204ENST00000428946 CLEC11AQ9Y240 323 aa23.49■■□□□ 1.35
LRRC23-204ENST00000428946 BBOX1O75936 387 aa23.48■■□□□ 1.35
LRRC23-204ENST00000428946 DPP8Q6V1X1 898 aaPredicted RBP23.48■■□□□ 1.35
LRRC23-204ENST00000428946 SP8Q8IXZ3 490 aa23.48■■□□□ 1.35
LRRC23-204ENST00000428946 MIER1Q8N108 512 aa23.48■■□□□ 1.35
LRRC23-204ENST00000428946 ZNF521Q96K83 1311 aa23.48■■□□□ 1.35
LRRC23-204ENST00000428946 VAMP4O75379 141 aa23.47■■□□□ 1.35
LRRC23-204ENST00000428946 MPNDQ8N594 471 aa23.47■■□□□ 1.35
LRRC23-204ENST00000428946 MYD88Q99836 296 aa23.47■■□□□ 1.35
LRRC23-204ENST00000428946 STK31Q9BXU1 1019 aa23.47■■□□□ 1.35
LRRC23-204ENST00000428946 MYH16Q9H6N6 1097 aa23.47■■□□□ 1.35
LRRC23-204ENST00000428946 PASKQ96RG2 1323 aa23.46■■□□□ 1.35
LRRC23-204ENST00000428946 IRS4O14654 1257 aaPredicted RBP23.45■■□□□ 1.34
LRRC23-204ENST00000428946 SLC4A2P04920 1241 aa23.45■■□□□ 1.34
LRRC23-204ENST00000428946 SCNN1DP51172 638 aa23.45■■□□□ 1.34
LRRC23-204ENST00000428946 MAP1SQ66K74 1059 aaPredicted RBP23.45■■□□□ 1.34
LRRC23-204ENST00000428946 G2E3Q7L622 706 aa23.45■■□□□ 1.34
LRRC23-204ENST00000428946 SUPT20HQ8NEM7 779 aa23.45■■□□□ 1.34
LRRC23-204ENST00000428946 CELF1Q92879 486 aaKnown RBP23.45■■□□□ 1.34
LRRC23-204ENST00000428946 RTFDC1Q9BY42 306 aaPredicted RBP23.45■■□□□ 1.34
LRRC23-204ENST00000428946 MKRN1Q9UHC7 482 aaKnown RBP23.45■■□□□ 1.34
LRRC23-204ENST00000428946 LMOD1P29536 600 aaPredicted RBP23.44■■□□□ 1.34
LRRC23-204ENST00000428946 EPS15P42566 896 aa23.44■■□□□ 1.34
LRRC23-204ENST00000428946 JARID2Q92833 1246 aaPredicted RBP23.44■■□□□ 1.34
LRRC23-204ENST00000428946 CREBZFQ9NS37 354 aa23.44■■□□□ 1.34
LRRC23-204ENST00000428946 DDX58O95786 925 aaKnown RBP23.43■■□□□ 1.34
LRRC23-204ENST00000428946 ITGBL1O95965 494 aaPredicted RBP23.43■■□□□ 1.34
LRRC23-204ENST00000428946 SF3B3Q15393 1217 aaKnown RBP23.43■■□□□ 1.34
LRRC23-204ENST00000428946 IFFO2Q5TF58 517 aa23.43■■□□□ 1.34
LRRC23-204ENST00000428946 PNMA8AQ86V59 439 aaPredicted RBP23.43■■□□□ 1.34
LRRC23-204ENST00000428946 TRIM28Q13263 835 aaKnown RBP23.42■■□□□ 1.34
LRRC23-204ENST00000428946 PCNTO95613 3336 aa23.42■■□□□ 1.34
LRRC23-204ENST00000428946 PI4KAP2A4QPH2 592 aa23.41■■□□□ 1.34
LRRC23-204ENST00000428946 CXCL9Q07325 125 aa23.41■■□□□ 1.34
LRRC23-204ENST00000428946 KIAA2012Q0VF49 1180 aa23.41■■□□□ 1.34
LRRC23-204ENST00000428946 PI4KAP1Q8N8J0 262 aa23.41■■□□□ 1.34
LRRC23-204ENST00000428946 ZBTB38Q8NAP3 1195 aaPredicted RBP23.41■■□□□ 1.34
LRRC23-204ENST00000428946 ZNRF3Q9ULT6 936 aa23.41■■□□□ 1.34
LRRC23-204ENST00000428946 MAP3K2Q9Y2U5 619 aa23.41■■□□□ 1.34
LRRC23-204ENST00000428946 KSR2Q6VAB6 950 aa23.4■■□□□ 1.34
LRRC23-204ENST00000428946 CNTROBQ8N137 903 aa23.4■■□□□ 1.34
LRRC23-204ENST00000428946 METTL22Q9BUU2 404 aaPredicted RBP23.4■■□□□ 1.34
LRRC23-204ENST00000428946 VPS33BQ9H267 617 aa23.4■■□□□ 1.34
LRRC23-204ENST00000428946 RAD17O75943 681 aa23.39■■□□□ 1.33
LRRC23-204ENST00000428946 TMC4Q7Z404 712 aa23.39■■□□□ 1.33
LRRC23-204ENST00000428946 CCDC85AQ96PX6 553 aaPredicted RBP23.39■■□□□ 1.33
LRRC23-204ENST00000428946 NSFL1CQ9UNZ2 370 aaKnown RBP23.39■■□□□ 1.33
LRRC23-204ENST00000428946 SPEF2Q9C093 1822 aa23.38■■□□□ 1.33
LRRC23-204ENST00000428946 HSPA1AP0DMV8 641 aaKnown RBP23.38■■□□□ 1.33
LRRC23-204ENST00000428946 HSPA1BP0DMV9 641 aaKnown RBP23.38■■□□□ 1.33
LRRC23-204ENST00000428946 GPSM2P81274 684 aa23.38■■□□□ 1.33
LRRC23-204ENST00000428946 GPR101Q96P66 508 aaPredicted RBP23.38■■□□□ 1.33
LRRC23-204ENST00000428946 SEC31BQ9NQW1 1179 aa23.38■■□□□ 1.33
LRRC23-204ENST00000428946 CWC25Q9NXE8 425 aaPredicted RBP23.38■■□□□ 1.33
LRRC23-204ENST00000428946 TMEM88BA6NKF7 163 aa23.37■■□□□ 1.33
LRRC23-204ENST00000428946 YDJCA8MPS7 323 aa23.37■■□□□ 1.33
LRRC23-204ENST00000428946 GMPSP49915 693 aaPredicted RBP23.37■■□□□ 1.33
LRRC23-204ENST00000428946 FLIIQ13045 1269 aa23.37■■□□□ 1.33
LRRC23-204ENST00000428946 CCDC191Q8NCU4 936 aa23.37■■□□□ 1.33
LRRC23-204ENST00000428946 CDCA7LQ96GN5 454 aa23.37■■□□□ 1.33
LRRC23-204ENST00000428946 GPRC5DQ9NZD1 345 aa23.37■■□□□ 1.33
LRRC23-204ENST00000428946 MYH3P11055 1940 aa23.37■■□□□ 1.33
LRRC23-204ENST00000428946 CNTNAP1P78357 1384 aa23.37■■□□□ 1.33
LRRC23-204ENST00000428946 E9PSI1 815 aa23.36■■□□□ 1.33
LRRC23-204ENST00000428946 RIMBP2O15034 1052 aa23.36■■□□□ 1.33
LRRC23-204ENST00000428946 PCCAP05165 728 aaPredicted RBP23.36■■□□□ 1.33
LRRC23-204ENST00000428946 FMR1Q06787 632 aaKnown RBP eCLIP23.36■■□□□ 1.33
LRRC23-204ENST00000428946 CIAPIN1Q6FI81 312 aa23.36■■□□□ 1.33
LRRC23-204ENST00000428946 C6orf229H3BNL8 230 aa23.35■■□□□ 1.33
LRRC23-204ENST00000428946 IGKV5-2P06315 115 aa23.35■■□□□ 1.33
LRRC23-204ENST00000428946 SLFN5Q08AF3 891 aa23.35■■□□□ 1.33
LRRC23-204ENST00000428946 DBNDD1Q9H9R9 158 aa23.35■■□□□ 1.33
LRRC23-204ENST00000428946 POLLQ9UGP5 575 aa23.35■■□□□ 1.33
LRRC23-204ENST00000428946 TRPM7Q96QT4 1865 aa23.34■■□□□ 1.33
LRRC23-204ENST00000428946 RPS8P62241 208 aaKnown RBP23.34■■□□□ 1.33
LRRC23-204ENST00000428946 FKBP5Q13451 457 aaPredicted RBP23.34■■□□□ 1.33
LRRC23-204ENST00000428946 WASHC4Q2M389 1173 aa23.34■■□□□ 1.33
LRRC23-204ENST00000428946 COL13A1Q5TAT6 717 aaPredicted RBP23.34■■□□□ 1.33
LRRC23-204ENST00000428946 BCL2L13Q9BXK5 485 aa23.34■■□□□ 1.33
LRRC23-204ENST00000428946 SHTN1A0MZ66 631 aa23.33■■□□□ 1.33
LRRC23-204ENST00000428946 PDE8AO60658 829 aa23.33■■□□□ 1.33
LRRC23-204ENST00000428946 USP50Q70EL3 339 aaPredicted RBP23.33■■□□□ 1.33
LRRC23-204ENST00000428946 ADARB2Q9NS39 739 aaKnown RBP23.33■■□□□ 1.33
LRRC23-204ENST00000428946 TRAF5O00463 557 aa23.32■■□□□ 1.32
LRRC23-204ENST00000428946 CWF19L2Q2TBE0 894 aaKnown RBP23.32■■□□□ 1.32
LRRC23-204ENST00000428946 CCDC152Q4G0S7 254 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms