RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 TRPM7Q96QT4 1865 aa13.31□□□□□ -0.28
HDLBP-213ENST00000427007 RASSF10A6NK89 507 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 ATP5J2-PTCD1G3V325 749 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 CXCL9Q07325 125 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 USP50Q70EL3 339 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-213ENST00000427007 PLBD2Q8NHP8 589 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 VPS33BQ9H267 617 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 DBF4Q9UBU7 674 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-213ENST00000427007 ZNRF3Q9ULT6 936 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 COL4A1P02462 1669 aa13.3□□□□□ -0.28
HDLBP-213ENST00000427007 TRAF5O00463 557 aa13.29□□□□□ -0.28
HDLBP-213ENST00000427007 HOXB7P09629 217 aa13.29□□□□□ -0.28
HDLBP-213ENST00000427007 RTL5Q5HYW3 569 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-213ENST00000427007 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
HDLBP-213ENST00000427007 AIDAQ96BJ3 306 aa13.29□□□□□ -0.28
HDLBP-213ENST00000427007 FAM89AQ96GI7 184 aa13.29□□□□□ -0.28
HDLBP-213ENST00000427007 CFAP44Q96MT7 982 aa13.29□□□□□ -0.28
HDLBP-213ENST00000427007 ADARB2Q9NS39 739 aaKnown RBP13.29□□□□□ -0.28
HDLBP-213ENST00000427007 MBIPQ9NS73 344 aa13.29□□□□□ -0.28
HDLBP-213ENST00000427007 RAD17O75943 681 aa13.28□□□□□ -0.28
HDLBP-213ENST00000427007 GMPSP49915 693 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-213ENST00000427007 KIAA2012Q0VF49 1180 aa13.28□□□□□ -0.28
HDLBP-213ENST00000427007 CIAPIN1Q6FI81 312 aa13.28□□□□□ -0.28
HDLBP-213ENST00000427007 PAXIP1Q6ZW49 1069 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-213ENST00000427007 ISCA1Q9BUE6 129 aa13.28□□□□□ -0.28
HDLBP-213ENST00000427007 PRKRIP1Q9H875 184 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-213ENST00000427007 WDR33Q9C0J8 1336 aaKnown RBP13.28□□□□□ -0.28
HDLBP-213ENST00000427007 GRM1Q13255 1194 aa13.27□□□□□ -0.29
HDLBP-213ENST00000427007 CELF1Q92879 486 aaKnown RBP13.27□□□□□ -0.29
HDLBP-213ENST00000427007 BCL2L13Q9BXK5 485 aa13.27□□□□□ -0.29
HDLBP-213ENST00000427007 HYPKQ9NX55 129 aa13.27□□□□□ -0.29
HDLBP-213ENST00000427007 WBP1LQ9NX94 342 aa13.27□□□□□ -0.29
HDLBP-213ENST00000427007 THSD7BQ9C0I4 1608 aa13.27□□□□□ -0.29
HDLBP-213ENST00000427007 YDJCA8MPS7 323 aa13.26□□□□□ -0.29
HDLBP-213ENST00000427007 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-213ENST00000427007 APAF1O14727 1248 aa13.26□□□□□ -0.29
HDLBP-213ENST00000427007 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-213ENST00000427007 LBX1P52954 281 aa13.26□□□□□ -0.29
HDLBP-213ENST00000427007 CST9Q5W186 159 aa13.26□□□□□ -0.29
HDLBP-213ENST00000427007 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
HDLBP-213ENST00000427007 SHTN1A0MZ66 631 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 IRS4O14654 1257 aaPredicted RBP13.25□□□□□ -0.29
HDLBP-213ENST00000427007 RIMBP2O15034 1052 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 ZNF853P0CG23 659 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 TNIP1Q15025 636 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 SF3B3Q15393 1217 aaKnown RBP13.25□□□□□ -0.29
HDLBP-213ENST00000427007 CYP4F22Q6NT55 531 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 TMC4Q7Z404 712 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 RIC3Q7Z5B4 369 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 CAPNS2Q96L46 248 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 GLIS2Q9BZE0 524 aaPredicted RBP13.25□□□□□ -0.29
HDLBP-213ENST00000427007 DBNDD1Q9H9R9 158 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 PRDM10Q9NQV6 1147 aa13.25□□□□□ -0.29
HDLBP-213ENST00000427007 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
HDLBP-213ENST00000427007 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
HDLBP-213ENST00000427007 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-213ENST00000427007 GPSM2P81274 684 aa13.24□□□□□ -0.29
HDLBP-213ENST00000427007 GOLGA2Q08379 1002 aa13.24□□□□□ -0.29
HDLBP-213ENST00000427007 WASHC4Q2M389 1173 aa13.24□□□□□ -0.29
HDLBP-213ENST00000427007 TRPM4Q8TD43 1214 aa13.24□□□□□ -0.29
HDLBP-213ENST00000427007 GPR101Q96P66 508 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-213ENST00000427007 CNOT7Q9UIV1 285 aaKnown RBP13.24□□□□□ -0.29
HDLBP-213ENST00000427007 ZBTB12Q9Y330 459 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-213ENST00000427007 CDHR2Q9BYE9 1310 aa13.23□□□□□ -0.29
HDLBP-213ENST00000427007 CELF2O95319 508 aaKnown RBP13.23□□□□□ -0.29
HDLBP-213ENST00000427007 HSPA8P11142 646 aaKnown RBP13.23□□□□□ -0.29
HDLBP-213ENST00000427007 GNAI1P63096 354 aa13.23□□□□□ -0.29
HDLBP-213ENST00000427007 MAP2K1Q02750 393 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-213ENST00000427007 MYD88Q99836 296 aa13.23□□□□□ -0.29
HDLBP-213ENST00000427007 ZNF408Q9H9D4 720 aa13.23□□□□□ -0.29
HDLBP-213ENST00000427007 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
HDLBP-213ENST00000427007 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
HDLBP-213ENST00000427007 TLL2Q9Y6L7 1015 aa13.23□□□□□ -0.29
HDLBP-213ENST00000427007 PSMD14O00487 310 aa13.22□□□□□ -0.29
HDLBP-213ENST00000427007 ECE1P42892 770 aa13.22□□□□□ -0.29
HDLBP-213ENST00000427007 TRIM28Q13263 835 aaKnown RBP13.22□□□□□ -0.29
HDLBP-213ENST00000427007 DOK7Q18PE1 504 aa13.22□□□□□ -0.29
HDLBP-213ENST00000427007 MICALL2Q8IY33 904 aa13.22□□□□□ -0.29
HDLBP-213ENST00000427007 C8orf58Q8NAV2 365 aa13.22□□□□□ -0.29
HDLBP-213ENST00000427007 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-213ENST00000427007 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
HDLBP-213ENST00000427007 H7C1D1 291 aa13.21□□□□□ -0.29
HDLBP-213ENST00000427007 ECE2O60344 883 aa13.21□□□□□ -0.29
HDLBP-213ENST00000427007 AOC2O75106 756 aa13.21□□□□□ -0.29
HDLBP-213ENST00000427007 CALD1Q05682 793 aaKnown RBP13.21□□□□□ -0.29
HDLBP-213ENST00000427007 SAMD7Q7Z3H4 446 aa13.21□□□□□ -0.29
HDLBP-213ENST00000427007 ZBTB38Q8NAP3 1195 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-213ENST00000427007 CCDC85AQ96PX6 553 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-213ENST00000427007 KCNQ5Q9NR82 932 aa13.21□□□□□ -0.29
HDLBP-213ENST00000427007 PGAP2Q9UHJ9 254 aa13.21□□□□□ -0.29
HDLBP-213ENST00000427007 RPS8P62241 208 aaKnown RBP13.2□□□□□ -0.3
HDLBP-213ENST00000427007 TBC1D10BQ4KMP7 808 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-213ENST00000427007 DLK2Q6UY11 383 aa13.2□□□□□ -0.3
HDLBP-213ENST00000427007 CDC37L1Q7L3B6 337 aa13.2□□□□□ -0.3
HDLBP-213ENST00000427007 SAPCD2Q86UD0 394 aa13.2□□□□□ -0.3
HDLBP-213ENST00000427007 TBC1D16Q8TBP0 767 aa13.2□□□□□ -0.3
HDLBP-213ENST00000427007 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
HDLBP-213ENST00000427007 EYA3Q99504 573 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms