RNA–Protein interactions for RNA: ENST00000423664.5

UBXN11-209, Transcript of UBX domain protein 11, humanhuman

TSL 3

Gene UBXN11, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-209ENST00000423664 PDE8AO60658 829 aa17.39■□□□□ 0.37
UBXN11-209ENST00000423664 GRAPQ13588 217 aa17.39■□□□□ 0.37
UBXN11-209ENST00000423664 SLC51AQ86UW1 340 aa17.39■□□□□ 0.37
UBXN11-209ENST00000423664 RTKN2Q8IZC4 609 aa17.39■□□□□ 0.37
UBXN11-209ENST00000423664 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
UBXN11-209ENST00000423664 SMC4Q9NTJ3 1288 aa17.39■□□□□ 0.37
UBXN11-209ENST00000423664 PTPRCP08575 1304 aa17.39■□□□□ 0.37
UBXN11-209ENST00000423664 CC2D2BQ6DHV5 1058 aa17.38■□□□□ 0.37
UBXN11-209ENST00000423664 UBE3BQ7Z3V4 1068 aa17.38■□□□□ 0.37
UBXN11-209ENST00000423664 BBOX1O75936 387 aa17.37■□□□□ 0.37
UBXN11-209ENST00000423664 CASP7P55210 303 aa17.37■□□□□ 0.37
UBXN11-209ENST00000423664 FKBP4Q02790 459 aaKnown RBP eCLIP17.37■□□□□ 0.37
UBXN11-209ENST00000423664 ATP6V0A2Q9Y487 856 aa17.37■□□□□ 0.37
UBXN11-209ENST00000423664 SPEF2Q9C093 1822 aa17.37■□□□□ 0.37
UBXN11-209ENST00000423664 RARSP54136 660 aaKnown RBP17.36■□□□□ 0.37
UBXN11-209ENST00000423664 CCDC152Q4G0S7 254 aa17.36■□□□□ 0.37
UBXN11-209ENST00000423664 SLC4A10Q6U841 1118 aa17.36■□□□□ 0.37
UBXN11-209ENST00000423664 ZC3H4Q9UPT8 1303 aaKnown RBP17.36■□□□□ 0.37
UBXN11-209ENST00000423664 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
UBXN11-209ENST00000423664 CTSWP56202 376 aa17.35■□□□□ 0.37
UBXN11-209ENST00000423664 GRIPAP1Q4V328 841 aa17.35■□□□□ 0.37
UBXN11-209ENST00000423664 CELF1Q92879 486 aaKnown RBP17.35■□□□□ 0.37
UBXN11-209ENST00000423664 PSMD1Q99460 953 aa17.35■□□□□ 0.37
UBXN11-209ENST00000423664 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
UBXN11-209ENST00000423664 TMC4Q7Z404 712 aa17.34■□□□□ 0.37
UBXN11-209ENST00000423664 SP8Q8IXZ3 490 aa17.34■□□□□ 0.37
UBXN11-209ENST00000423664 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
UBXN11-209ENST00000423664 PLA2G12BQ9BX93 195 aa17.34■□□□□ 0.37
UBXN11-209ENST00000423664 SRCIN1Q9C0H9 1055 aa17.34■□□□□ 0.37
UBXN11-209ENST00000423664 SEC31BQ9NQW1 1179 aa17.34■□□□□ 0.37
UBXN11-209ENST00000423664 ZNF277Q9NRM2 450 aaPredicted RBP17.34■□□□□ 0.37
UBXN11-209ENST00000423664 TTLL11Q8NHH1 800 aa17.33■□□□□ 0.36
UBXN11-209ENST00000423664 CCDC85AQ96PX6 553 aaPredicted RBP17.33■□□□□ 0.36
UBXN11-209ENST00000423664 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
UBXN11-209ENST00000423664 GPBP1L1Q9HC44 474 aaPredicted RBP17.33■□□□□ 0.36
UBXN11-209ENST00000423664 LTBP1Q14766 1721 aa17.33■□□□□ 0.36
UBXN11-209ENST00000423664 GRM8O00222 908 aa17.32■□□□□ 0.36
UBXN11-209ENST00000423664 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
UBXN11-209ENST00000423664 NOB1Q9ULX3 412 aaKnown RBP17.32■□□□□ 0.36
UBXN11-209ENST00000423664 DUOX1Q9NRD9 1551 aa17.32■□□□□ 0.36
UBXN11-209ENST00000423664 RTL9Q8NET4 1388 aa17.31■□□□□ 0.36
UBXN11-209ENST00000423664 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
UBXN11-209ENST00000423664 GREM2Q9H772 168 aa17.31■□□□□ 0.36
UBXN11-209ENST00000423664 COL4A5P29400 1685 aa17.3■□□□□ 0.36
UBXN11-209ENST00000423664 KIF16BQ96L93 1317 aa17.3■□□□□ 0.36
UBXN11-209ENST00000423664 CSF1RP07333 972 aa17.3■□□□□ 0.36
UBXN11-209ENST00000423664 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
UBXN11-209ENST00000423664 C9orf78Q9NZ63 289 aaPredicted RBP17.3■□□□□ 0.36
UBXN11-209ENST00000423664 DPP8Q6V1X1 898 aaPredicted RBP17.29■□□□□ 0.36
UBXN11-209ENST00000423664 ANKRD18AQ8IVF6 992 aa17.29■□□□□ 0.36
UBXN11-209ENST00000423664 MPNDQ8N594 471 aa17.29■□□□□ 0.36
UBXN11-209ENST00000423664 CDC5LQ99459 802 aaKnown RBP17.29■□□□□ 0.36
UBXN11-209ENST00000423664 UTYO14607 1347 aa17.28■□□□□ 0.36
UBXN11-209ENST00000423664 KDM2BQ8NHM5 1336 aa17.28■□□□□ 0.36
UBXN11-209ENST00000423664 GLTPD2A6NH11 291 aa17.28■□□□□ 0.36
UBXN11-209ENST00000423664 BCAR3O75815 825 aa17.28■□□□□ 0.36
UBXN11-209ENST00000423664 FOXO4P98177 505 aa17.28■□□□□ 0.36
UBXN11-209ENST00000423664 FAM161AQ3B820 660 aa17.28■□□□□ 0.36
UBXN11-209ENST00000423664 API5Q9BZZ5 524 aaKnown RBP17.28■□□□□ 0.36
UBXN11-209ENST00000423664 WDR90Q96KV7 1748 aa17.27■□□□□ 0.36
UBXN11-209ENST00000423664 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
UBXN11-209ENST00000423664 EPHA10Q5JZY3 1008 aa17.27■□□□□ 0.36
UBXN11-209ENST00000423664 SUPT20HQ8NEM7 779 aa17.27■□□□□ 0.36
UBXN11-209ENST00000423664 ARHGAP45Q92619 1136 aa17.27■□□□□ 0.36
UBXN11-209ENST00000423664 NMRK2Q9NPI5 230 aa17.27■□□□□ 0.36
UBXN11-209ENST00000423664 ITGA6P23229 1130 aa17.26■□□□□ 0.35
UBXN11-209ENST00000423664 GPSM2P81274 684 aa17.26■□□□□ 0.35
UBXN11-209ENST00000423664 AOC3Q16853 763 aa17.26■□□□□ 0.35
UBXN11-209ENST00000423664 LARGE2Q8N3Y3 721 aa17.26■□□□□ 0.35
UBXN11-209ENST00000423664 SUCLG2Q96I99 432 aa17.26■□□□□ 0.35
UBXN11-209ENST00000423664 VPS33BQ9H267 617 aa17.26■□□□□ 0.35
UBXN11-209ENST00000423664 NSFL1CQ9UNZ2 370 aaKnown RBP17.26■□□□□ 0.35
UBXN11-209ENST00000423664 A0A1B0GUL6 1792 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 FZD9O00144 591 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 KIF3CO14782 793 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 PPIP5K2O43314 1243 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 CCT4P50991 539 aaKnown RBP17.25■□□□□ 0.35
UBXN11-209ENST00000423664 DPY19L2Q6NUT2 758 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 LMBR1LQ6UX01 489 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 JDP2Q8WYK2 163 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 KAZALD1Q96I82 304 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 USP44Q9H0E7 712 aa17.25■□□□□ 0.35
UBXN11-209ENST00000423664 BSDC1Q9NW68 430 aaPredicted RBP17.25■□□□□ 0.35
UBXN11-209ENST00000423664 IPO8O15397 1037 aaKnown RBP17.24■□□□□ 0.35
UBXN11-209ENST00000423664 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
UBXN11-209ENST00000423664 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
UBXN11-209ENST00000423664 POLLQ9UGP5 575 aa17.24■□□□□ 0.35
UBXN11-209ENST00000423664 SCN4AP35499 1836 aa17.24■□□□□ 0.35
UBXN11-209ENST00000423664 ZNF541Q9H0D2 1346 aa17.23■□□□□ 0.35
UBXN11-209ENST00000423664 ANKRD18BA2A2Z9 1011 aa17.23■□□□□ 0.35
UBXN11-209ENST00000423664 DDNO94850 711 aaPredicted RBP17.23■□□□□ 0.35
UBXN11-209ENST00000423664 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
UBXN11-209ENST00000423664 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
UBXN11-209ENST00000423664 CHMP3Q9Y3E7 222 aa17.23■□□□□ 0.35
UBXN11-209ENST00000423664 C6orf229H3BNL8 230 aa17.22■□□□□ 0.35
UBXN11-209ENST00000423664 TRIM27P14373 513 aa17.22■□□□□ 0.35
UBXN11-209ENST00000423664 IFIT5Q13325 482 aaKnown RBP17.22■□□□□ 0.35
UBXN11-209ENST00000423664 ATF7IPQ6VMQ6 1270 aa17.22■□□□□ 0.35
UBXN11-209ENST00000423664 NIM1KQ8IY84 436 aa17.22■□□□□ 0.35
UBXN11-209ENST00000423664 TBC1D16Q8TBP0 767 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms