RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 TBC1D9Q6ZT07 1266 aa8.59□□□□□ -1.03
TVP23C-202ENST00000419890 KIAA1211Q6ZU35 1233 aa8.59□□□□□ -1.03
TVP23C-202ENST00000419890 ILDR2Q71H61 639 aa8.59□□□□□ -1.03
TVP23C-202ENST00000419890 KRT28Q7Z3Y7 464 aa8.59□□□□□ -1.03
TVP23C-202ENST00000419890 CDK19Q9BWU1 502 aa8.59□□□□□ -1.03
TVP23C-202ENST00000419890 TERF2IPQ9NYB0 399 aa8.59□□□□□ -1.03
TVP23C-202ENST00000419890 RGPD8O14715 1765 aaPredicted RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 N4BP2Q86UW6 1770 aaPredicted RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 SOS2Q07890 1332 aaPredicted RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 SPATA31A6Q5VVP1 1343 aa8.58□□□□□ -1.04
TVP23C-202ENST00000419890 FMN2Q9NZ56 1722 aa8.58□□□□□ -1.04
TVP23C-202ENST00000419890 ZBTB7BO15156 539 aaPredicted RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 DIAPH1O60610 1272 aaKnown RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 MBD3O95983 291 aa8.58□□□□□ -1.04
TVP23C-202ENST00000419890 TSR2Q969E8 191 aaKnown RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 USB1Q9BQ65 265 aaKnown RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 REPIN1Q9BWE0 567 aaKnown RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 API5Q9BZZ5 524 aaKnown RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 IFT57Q9NWB7 429 aa8.58□□□□□ -1.04
TVP23C-202ENST00000419890 DDX49Q9Y6V7 483 aaKnown RBP8.58□□□□□ -1.04
TVP23C-202ENST00000419890 TUBGCP6Q96RT7 1819 aa8.58□□□□□ -1.04
TVP23C-202ENST00000419890 NHSL1Q5SYE7 1610 aa8.58□□□□□ -1.04
TVP23C-202ENST00000419890 DLG5Q8TDM6 1919 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 DYNC1I1O14576 645 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 EPB41L2O43491 1005 aaKnown RBP8.57□□□□□ -1.04
TVP23C-202ENST00000419890 LORP23490 312 aaPredicted RBP8.57□□□□□ -1.04
TVP23C-202ENST00000419890 MCM2P49736 904 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 GNAI1P63096 354 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 RC3H1Q5TC82 1133 aaKnown RBP8.57□□□□□ -1.04
TVP23C-202ENST00000419890 INTS3Q68E01 1043 aaKnown RBP8.57□□□□□ -1.04
TVP23C-202ENST00000419890 SMYD5Q6GMV2 418 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 VSIG10Q8N0Z9 540 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 KIFC2Q96AC6 838 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 NUDT16Q96DE0 195 aaKnown RBP8.57□□□□□ -1.04
TVP23C-202ENST00000419890 LNPKQ9C0E8 428 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 ZMYND15Q9H091 742 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 AATKQ6ZMQ8 1374 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 ITSN1Q15811 1721 aa8.57□□□□□ -1.04
TVP23C-202ENST00000419890 SSH2Q76I76 1423 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 ADAMTS2O95450 1211 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 RIPK4P57078 832 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 SRPK2P78362 688 aaKnown RBP8.56□□□□□ -1.04
TVP23C-202ENST00000419890 CASC1Q6TDU7 716 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 NGDNQ8NEJ9 315 aaKnown RBP8.56□□□□□ -1.04
TVP23C-202ENST00000419890 GAS2L2Q8NHY3 880 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 HLA-CQ95604 372 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 IL17RAQ96F46 866 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 LMBRD1Q9NUN5 540 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 CCDC39Q9UFE4 941 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 RGS17Q9UGC6 210 aaPredicted RBP8.56□□□□□ -1.04
TVP23C-202ENST00000419890 ZKSCAN5Q9Y2L8 839 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 MON2Q7Z3U7 1717 aa8.56□□□□□ -1.04
TVP23C-202ENST00000419890 PRR36Q9H6K5 1346 aa8.55□□□□□ -1.04
TVP23C-202ENST00000419890 ANKARQ7Z5J8 1434 aa8.55□□□□□ -1.04
TVP23C-202ENST00000419890 ZNF853P0CG23 659 aa8.55□□□□□ -1.04
TVP23C-202ENST00000419890 SSFA2P28290 1259 aa8.55□□□□□ -1.04
TVP23C-202ENST00000419890 NFE2L2Q16236 605 aa8.55□□□□□ -1.04
TVP23C-202ENST00000419890 ZSCAN23Q3MJ62 389 aa8.55□□□□□ -1.04
TVP23C-202ENST00000419890 ATP10DQ9P241 1426 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 REC8O95072 547 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 TNNT2P45379 298 aaPredicted RBP8.54□□□□□ -1.04
TVP23C-202ENST00000419890 WNT7BP56706 349 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 TTC22Q5TAA0 569 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 ANKRD45Q5TZF3 282 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 LRSAM1Q6UWE0 723 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 HDGFL2Q7Z4V5 671 aaPredicted RBP8.54□□□□□ -1.04
TVP23C-202ENST00000419890 RPAP2Q8IXW5 612 aaPredicted RBP8.54□□□□□ -1.04
TVP23C-202ENST00000419890 SYAP1Q96A49 352 aaPredicted RBP8.54□□□□□ -1.04
TVP23C-202ENST00000419890 NGLY1Q96IV0 654 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 C8orf37Q96NL8 207 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 ARXQ96QS3 562 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 DCTPP1Q9H773 170 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 MAP2P11137 1827 aaKnown RBP8.54□□□□□ -1.04
TVP23C-202ENST00000419890 EDC4Q6P2E9 1401 aaKnown RBP8.54□□□□□ -1.04
TVP23C-202ENST00000419890 SPATA31A3Q5VYP0 1347 aa8.54□□□□□ -1.04
TVP23C-202ENST00000419890 AKAP12Q02952 1782 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 KIF1AQ12756 1690 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 PXDNQ92626 1479 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 KIAA0232Q92628 1395 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 U2SURPO15042 1029 aaKnown RBP8.53□□□□□ -1.04
TVP23C-202ENST00000419890 FYB1O15117 783 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 KDM4AO75164 1064 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 VAMP4O75379 141 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 POTEAQ6S8J7 498 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 SASS6Q6UVJ0 657 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 SMAP1Q8IYB5 467 aaPredicted RBP8.53□□□□□ -1.04
TVP23C-202ENST00000419890 FAM184AQ8NB25 1140 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 INTS4Q96HW7 963 aaKnown RBP8.53□□□□□ -1.04
TVP23C-202ENST00000419890 USP26Q9BXU7 913 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 LRP6O75581 1613 aa8.53□□□□□ -1.04
TVP23C-202ENST00000419890 ARHGEF10O15013 1369 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 GSPT1P15170 499 aaKnown RBP8.52□□□□□ -1.05
TVP23C-202ENST00000419890 ANAPC15P60006 121 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 UVSSAQ2YD98 709 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 ZNF772Q68DY9 489 aaPredicted RBP8.52□□□□□ -1.05
TVP23C-202ENST00000419890 PLEKHM2Q8IWE5 1019 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 ANKRD44Q8N8A2 993 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 CABLES1Q8TDN4 633 aa8.52□□□□□ -1.05
TVP23C-202ENST00000419890 OSBPL3Q9H4L5 887 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms