RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 LIMCH1Q9UPQ0 1083 aa5.4□□□□□ -1.54
GPCPD1-202ENST00000418646 PHKG2P15735 406 aa5.4□□□□□ -1.55
GPCPD1-202ENST00000418646 EPHA10Q5JZY3 1008 aa5.4□□□□□ -1.55
GPCPD1-202ENST00000418646 SUCLG2Q96I99 432 aa5.4□□□□□ -1.55
GPCPD1-202ENST00000418646 UBXN6Q9BZV1 441 aa5.4□□□□□ -1.55
GPCPD1-202ENST00000418646 PDCL3Q9H2J4 239 aa5.4□□□□□ -1.55
GPCPD1-202ENST00000418646 FBXO3Q9UK99 471 aa5.4□□□□□ -1.55
GPCPD1-202ENST00000418646 DYNC1I1O14576 645 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 CIAO1O76071 339 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 TRIM28Q13263 835 aaKnown RBP5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 CCDC183Q5T5S1 534 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 NYAP1Q6ZVC0 841 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 HAUS7Q99871 368 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 CHMP4AQ9BY43 222 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 MIS18AQ9NYP9 233 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 HMG20BQ9P0W2 317 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 RBM27Q9P2N5 1060 aaKnown RBP5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 MRVI1Q9Y6F6 885 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 SLC27A2O14975 620 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 LETM1O95202 739 aaPredicted RBP5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 RPS6KB1P23443 525 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 ZSCAN31Q96LW9 406 aaPredicted RBP5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 METTL22Q9BUU2 404 aaPredicted RBP5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 NBPF3Q9H094 633 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 ANKRD31Q8N7Z5 1873 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 STOX1Q6ZVD7 989 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 GTF3C6Q969F1 213 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 LLPHQ9BRT6 129 aaKnown RBP5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 SPATA31A3Q5VYP0 1347 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 IRS2Q9Y4H2 1338 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 BAZ2AQ9UIF9 1905 aaKnown RBP5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 A0A0D9SFI3 127 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 STX6O43752 255 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 KDM4AO75164 1064 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 GCKRQ14397 625 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 HSP90AB4PQ58FF6 505 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 TTC6Q86TZ1 520 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 ERC1Q8IUD2 1116 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 PGBD1Q96JS3 809 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 TMX1Q9H3N1 280 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 ECHDC1Q9NTX5 307 aa5.39□□□□□ -1.55
GPCPD1-202ENST00000418646 GCP02774 474 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 FECHP22830 423 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 CREB3L3Q68CJ9 461 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 MCTP1Q6DN14 999 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 TLR7Q9NYK1 1049 aaKnown RBP5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 PRAMEF22A3QJZ6 481 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 GRM8O00222 908 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 CSF1RP07333 972 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 TSHZ3Q63HK5 1081 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 ATL3Q6DD88 541 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 ZNF589Q86UQ0 364 aaPredicted RBP5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 PRIMPOLQ96LW4 560 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 DBNLQ9UJU6 430 aaKnown RBP5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 CDHR2Q9BYE9 1310 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 PI4KAP2A4QPH2 592 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 ELL2O00472 640 aaPredicted RBP5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 CYP27B1O15528 508 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 PFKFB2O60825 505 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 CCDC93Q567U6 631 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 CAVIN1Q6NZI2 390 aaKnown RBP5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 PI4KAP1Q8N8J0 262 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 SLC26A8Q96RN1 970 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 ISCA1Q9BUE6 129 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 DSCC1Q9BVC3 393 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 EID1Q9Y6B2 187 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 PARP14Q460N5 1801 aa5.38□□□□□ -1.55
GPCPD1-202ENST00000418646 UBTFL1P0CB47 393 aaPredicted RBP5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 UTP14CQ5TAP6 766 aaKnown RBP5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 HDGFL1Q5TGJ6 251 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 ZNF790Q6PG37 636 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 NBPF11Q86T75 865 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 RCOR1Q9UKL0 485 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 RGL2O15211 777 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 CEBPAP49715 358 aaPredicted RBP5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 NEK4P51957 841 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 NAA16Q6N069 864 aaPredicted RBP5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 CNTROBQ8N137 903 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 BICC1Q9H694 974 aaKnown RBP5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 CCDC39Q9UFE4 941 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 HPSEQ9Y251 543 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 DDX49Q9Y6V7 483 aaKnown RBP5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 SYCE3A1L190 88 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 HIP1O00291 1037 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 SPATA20Q8TB22 786 aa5.37□□□□□ -1.55
GPCPD1-202ENST00000418646 NBPF26B4DH59 902 aa5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 FDPSP14324 419 aaKnown RBP5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 ZMYM1Q5SVZ6 1142 aa5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 NT5DC1Q5TFE4 455 aa5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 NBPF14Q5TI25 921 aa5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 NBPF10Q6P3W6 841 aaKnown RBP5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 CASC1Q6TDU7 716 aa5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 NBPF15Q8N660 670 aa5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 RTF1Q92541 710 aaKnown RBP5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 HPS5Q9UPZ3 1129 aa5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 MYH8P13535 1937 aa5.36□□□□□ -1.55
GPCPD1-202ENST00000418646 TCRBV5S4A2TA0A5A2 114 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms