RNA–Protein interactions for RNA: ENST00000417588.5

CHEK2-211, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-211ENST00000417588 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
CHEK2-211ENST00000417588 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
CHEK2-211ENST00000417588 ATP6V0A2Q9Y487 856 aa12.31□□□□□ -0.44
CHEK2-211ENST00000417588 LRRC37AA6NMS7 1700 aa12.31□□□□□ -0.44
CHEK2-211ENST00000417588 PDE8AO60658 829 aa12.3□□□□□ -0.44
CHEK2-211ENST00000417588 HSP90B1P14625 803 aaKnown RBP12.3□□□□□ -0.44
CHEK2-211ENST00000417588 CASP7P55210 303 aa12.3□□□□□ -0.44
CHEK2-211ENST00000417588 GRAPQ13588 217 aa12.3□□□□□ -0.44
CHEK2-211ENST00000417588 ALDH1L2Q3SY69 923 aa12.3□□□□□ -0.44
CHEK2-211ENST00000417588 GRAPLQ8TC17 118 aaPredicted RBP12.3□□□□□ -0.44
CHEK2-211ENST00000417588 PSMD1Q99460 953 aa12.3□□□□□ -0.44
CHEK2-211ENST00000417588 GRIPAP1Q4V328 841 aa12.3□□□□□ -0.44
CHEK2-211ENST00000417588 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
CHEK2-211ENST00000417588 GPBP1L1Q9HC44 474 aaPredicted RBP12.3□□□□□ -0.44
CHEK2-211ENST00000417588 UBE3BQ7Z3V4 1068 aa12.29□□□□□ -0.44
CHEK2-211ENST00000417588 SP8Q8IXZ3 490 aa12.29□□□□□ -0.44
CHEK2-211ENST00000417588 ZNF526Q8TF50 670 aaPredicted RBP12.29□□□□□ -0.44
CHEK2-211ENST00000417588 BCL2L13Q9BXK5 485 aa12.29□□□□□ -0.44
CHEK2-211ENST00000417588 PTPRCP08575 1304 aa12.28□□□□□ -0.44
CHEK2-211ENST00000417588 BRPF1P55201 1214 aaPredicted RBP12.28□□□□□ -0.44
CHEK2-211ENST00000417588 TTLL11Q8NHH1 800 aa12.28□□□□□ -0.44
CHEK2-211ENST00000417588 PLA2G12BQ9BX93 195 aa12.28□□□□□ -0.44
CHEK2-211ENST00000417588 SEC31BQ9NQW1 1179 aa12.28□□□□□ -0.44
CHEK2-211ENST00000417588 ZNF277Q9NRM2 450 aaPredicted RBP12.28□□□□□ -0.44
CHEK2-211ENST00000417588 ZBED9Q6R2W3 1325 aa12.28□□□□□ -0.44
CHEK2-211ENST00000417588 CTSWP56202 376 aa12.27□□□□□ -0.44
CHEK2-211ENST00000417588 CCDC152Q4G0S7 254 aa12.27□□□□□ -0.44
CHEK2-211ENST00000417588 TMC4Q7Z404 712 aa12.27□□□□□ -0.44
CHEK2-211ENST00000417588 COL4A5P29400 1685 aa12.27□□□□□ -0.45
CHEK2-211ENST00000417588 DUOX1Q9NRD9 1551 aa12.27□□□□□ -0.45
CHEK2-211ENST00000417588 LTBP1Q14766 1721 aa12.27□□□□□ -0.45
CHEK2-211ENST00000417588 RTL9Q8NET4 1388 aa12.27□□□□□ -0.45
CHEK2-211ENST00000417588 GLTPD2A6NH11 291 aa12.26□□□□□ -0.45
CHEK2-211ENST00000417588 KIF3CO14782 793 aa12.26□□□□□ -0.45
CHEK2-211ENST00000417588 ALDH1L1O75891 902 aa12.26□□□□□ -0.45
CHEK2-211ENST00000417588 IARSP41252 1262 aaKnown RBP12.26□□□□□ -0.45
CHEK2-211ENST00000417588 RARSP54136 660 aaKnown RBP12.26□□□□□ -0.45
CHEK2-211ENST00000417588 RPS8P62241 208 aaKnown RBP12.26□□□□□ -0.45
CHEK2-211ENST00000417588 RTFDC1Q9BY42 306 aaPredicted RBP12.26□□□□□ -0.45
CHEK2-211ENST00000417588 SMC4Q9NTJ3 1288 aa12.26□□□□□ -0.45
CHEK2-211ENST00000417588 SLC4A10Q6U841 1118 aa12.26□□□□□ -0.45
CHEK2-211ENST00000417588 CCDC85AQ96PX6 553 aaPredicted RBP12.26□□□□□ -0.45
CHEK2-211ENST00000417588 SRCIN1Q9C0H9 1055 aa12.26□□□□□ -0.45
CHEK2-211ENST00000417588 NMRK2Q9NPI5 230 aa12.26□□□□□ -0.45
CHEK2-211ENST00000417588 KDM2BQ8NHM5 1336 aa12.25□□□□□ -0.45
CHEK2-211ENST00000417588 GRM8O00222 908 aa12.25□□□□□ -0.45
CHEK2-211ENST00000417588 CSF1RP07333 972 aa12.25□□□□□ -0.45
CHEK2-211ENST00000417588 MPNDQ8N594 471 aa12.25□□□□□ -0.45
CHEK2-211ENST00000417588 TMX4Q9H1E5 349 aaPredicted RBP12.25□□□□□ -0.45
CHEK2-211ENST00000417588 GREM2Q9H772 168 aa12.25□□□□□ -0.45
CHEK2-211ENST00000417588 WDR90Q96KV7 1748 aa12.24□□□□□ -0.45
CHEK2-211ENST00000417588 FZD9O00144 591 aa12.24□□□□□ -0.45
CHEK2-211ENST00000417588 FOXO4P98177 505 aa12.24□□□□□ -0.45
CHEK2-211ENST00000417588 DPP8Q6V1X1 898 aaPredicted RBP12.24□□□□□ -0.45
CHEK2-211ENST00000417588 VPS33BQ9H267 617 aa12.24□□□□□ -0.45
CHEK2-211ENST00000417588 UTYO14607 1347 aa12.24□□□□□ -0.45
CHEK2-211ENST00000417588 SPEF2Q9C093 1822 aa12.23□□□□□ -0.45
CHEK2-211ENST00000417588 DPY19L2Q6NUT2 758 aa12.23□□□□□ -0.45
CHEK2-211ENST00000417588 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
CHEK2-211ENST00000417588 POTECB2RU33 542 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 NBPF7P0C2Y1 421 aaPredicted RBP12.22□□□□□ -0.45
CHEK2-211ENST00000417588 GPSM2P81274 684 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 EPHA10Q5JZY3 1008 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 ANKRD18AQ8IVF6 992 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 SUPT20HQ8NEM7 779 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 JDP2Q8WYK2 163 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 KAZALD1Q96I82 304 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 CDC5LQ99459 802 aaKnown RBP12.22□□□□□ -0.45
CHEK2-211ENST00000417588 PODXL2Q9NZ53 605 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 C9orf78Q9NZ63 289 aaPredicted RBP12.22□□□□□ -0.45
CHEK2-211ENST00000417588 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
CHEK2-211ENST00000417588 PPIP5K2O43314 1243 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 DDNO94850 711 aaPredicted RBP12.22□□□□□ -0.45
CHEK2-211ENST00000417588 ITGA6P23229 1130 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 C1QTNF8P60827 252 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 KIAA2012Q0VF49 1180 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 AOC3Q16853 763 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 FAM161AQ3B820 660 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 RRAGCQ9HB90 399 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 BSDC1Q9NW68 430 aaPredicted RBP12.22□□□□□ -0.45
CHEK2-211ENST00000417588 POLLQ9UGP5 575 aa12.22□□□□□ -0.45
CHEK2-211ENST00000417588 KIF16BQ96L93 1317 aa12.21□□□□□ -0.45
CHEK2-211ENST00000417588 ZNF541Q9H0D2 1346 aa12.21□□□□□ -0.45
CHEK2-211ENST00000417588 ARHGAP45Q92619 1136 aa12.21□□□□□ -0.46
CHEK2-211ENST00000417588 USP44Q9H0E7 712 aa12.21□□□□□ -0.46
CHEK2-211ENST00000417588 BCAR3O75815 825 aa12.2□□□□□ -0.46
CHEK2-211ENST00000417588 VEGFAP15692 232 aaPredicted RBP12.2□□□□□ -0.46
CHEK2-211ENST00000417588 LMBR1LQ6UX01 489 aa12.2□□□□□ -0.46
CHEK2-211ENST00000417588 TBC1D16Q8TBP0 767 aa12.2□□□□□ -0.46
CHEK2-211ENST00000417588 SUCLG2Q96I99 432 aa12.2□□□□□ -0.46
CHEK2-211ENST00000417588 L3MBTL3Q96JM7 780 aaPredicted RBP12.2□□□□□ -0.46
CHEK2-211ENST00000417588 API5Q9BZZ5 524 aaKnown RBP12.2□□□□□ -0.46
CHEK2-211ENST00000417588 SCN4AP35499 1836 aa12.2□□□□□ -0.46
CHEK2-211ENST00000417588 TOMM70O94826 608 aa12.19□□□□□ -0.46
CHEK2-211ENST00000417588 RABL6Q3YEC7 729 aaPredicted RBP12.19□□□□□ -0.46
CHEK2-211ENST00000417588 NIM1KQ8IY84 436 aa12.19□□□□□ -0.46
CHEK2-211ENST00000417588 MINPP1Q9UNW1 487 aa12.19□□□□□ -0.46
CHEK2-211ENST00000417588 CCT4P50991 539 aaKnown RBP12.18□□□□□ -0.46
CHEK2-211ENST00000417588 WASHC4Q2M389 1173 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms