RNA–Protein interactions for RNA: ENST00000416650.5

APTR-202, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 3

Gene APTR, Length 609 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-202ENST00000416650 HSPA1AP0DMV8 641 aaKnown RBP28.1■■■□□ 2.09
APTR-202ENST00000416650 HSPA1BP0DMV9 641 aaKnown RBP28.1■■■□□ 2.09
APTR-202ENST00000416650 DPP8Q6V1X1 898 aaPredicted RBP28.1■■■□□ 2.09
APTR-202ENST00000416650 CNTNAP1P78357 1384 aa28.1■■■□□ 2.09
APTR-202ENST00000416650 ATP5J2-PTCD1G3V325 749 aa28.09■■■□□ 2.09
APTR-202ENST00000416650 MYH3P11055 1940 aa28.09■■■□□ 2.09
APTR-202ENST00000416650 MAP1SQ66K74 1059 aaPredicted RBP28.08■■■□□ 2.09
APTR-202ENST00000416650 MPNDQ8N594 471 aa28.08■■■□□ 2.09
APTR-202ENST00000416650 FAM89AQ96GI7 184 aa28.08■■■□□ 2.09
APTR-202ENST00000416650 TMEM88BA6NKF7 163 aa28.07■■■□□ 2.08
APTR-202ENST00000416650 TMC4Q7Z404 712 aa28.07■■■□□ 2.08
APTR-202ENST00000416650 EPS15P42566 896 aa28.06■■■□□ 2.08
APTR-202ENST00000416650 GOLGA2Q08379 1002 aa28.06■■■□□ 2.08
APTR-202ENST00000416650 COL13A1Q5TAT6 717 aaPredicted RBP28.06■■■□□ 2.08
APTR-202ENST00000416650 CNTROBQ8N137 903 aa28.06■■■□□ 2.08
APTR-202ENST00000416650 KIAA2012Q0VF49 1180 aa28.05■■■□□ 2.08
APTR-202ENST00000416650 ZNRF3Q9ULT6 936 aa28.05■■■□□ 2.08
APTR-202ENST00000416650 ELL2O00472 640 aaPredicted RBP28.04■■■□□ 2.08
APTR-202ENST00000416650 TRIM28Q13263 835 aaKnown RBP28.04■■■□□ 2.08
APTR-202ENST00000416650 SF3B3Q15393 1217 aaKnown RBP28.04■■■□□ 2.08
APTR-202ENST00000416650 PHAXQ9H814 394 aaKnown RBP28.04■■■□□ 2.08
APTR-202ENST00000416650 CACNA1FO60840 1977 aa28.04■■■□□ 2.08
APTR-202ENST00000416650 RIC3Q7Z5B4 369 aa28.03■■■□□ 2.08
APTR-202ENST00000416650 SPEF2Q9C093 1822 aa28.03■■■□□ 2.08
APTR-202ENST00000416650 CXCL9Q07325 125 aa28.02■■■□□ 2.08
APTR-202ENST00000416650 RTL5Q5HYW3 569 aaPredicted RBP28.02■■■□□ 2.08
APTR-202ENST00000416650 USP50Q70EL3 339 aaPredicted RBP28.02■■■□□ 2.08
APTR-202ENST00000416650 C8orf58Q8NAV2 365 aa28.02■■■□□ 2.08
APTR-202ENST00000416650 GPRC5DQ9NZD1 345 aa28.02■■■□□ 2.08
APTR-202ENST00000416650 IRS4O14654 1257 aaPredicted RBP28.01■■■□□ 2.07
APTR-202ENST00000416650 CELF1Q92879 486 aaKnown RBP28.01■■■□□ 2.07
APTR-202ENST00000416650 THSD7BQ9C0I4 1608 aa28■■■□□ 2.07
APTR-202ENST00000416650 CCDC184Q52MB2 194 aa28■■■□□ 2.07
APTR-202ENST00000416650 PSME4Q14997 1843 aa27.99■■■□□ 2.07
APTR-202ENST00000416650 CDHR2Q9BYE9 1310 aa27.99■■■□□ 2.07
APTR-202ENST00000416650 CIAPIN1Q6FI81 312 aa27.99■■■□□ 2.07
APTR-202ENST00000416650 SCN9AQ15858 1988 aa27.99■■■□□ 2.07
APTR-202ENST00000416650 ZBTB38Q8NAP3 1195 aaPredicted RBP27.98■■■□□ 2.07
APTR-202ENST00000416650 MYD88Q99836 296 aa27.98■■■□□ 2.07
APTR-202ENST00000416650 ADARB2Q9NS39 739 aaKnown RBP27.98■■■□□ 2.07
APTR-202ENST00000416650 GMPSP49915 693 aaPredicted RBP27.97■■■□□ 2.07
APTR-202ENST00000416650 CCDC30Q5VVM6 783 aa27.97■■■□□ 2.07
APTR-202ENST00000416650 CHMP4AQ9BY43 222 aa27.97■■■□□ 2.07
APTR-202ENST00000416650 VEGFBP49765 207 aa27.96■■■□□ 2.07
APTR-202ENST00000416650 RASSF10A6NK89 507 aa27.95■■■□□ 2.06
APTR-202ENST00000416650 YDJCA8MPS7 323 aa27.95■■■□□ 2.06
APTR-202ENST00000416650 RAD17O75943 681 aa27.95■■■□□ 2.06
APTR-202ENST00000416650 TNIP1Q15025 636 aa27.95■■■□□ 2.06
APTR-202ENST00000416650 TSPYL6Q8N831 410 aa27.95■■■□□ 2.06
APTR-202ENST00000416650 CCDC191Q8NCU4 936 aa27.95■■■□□ 2.06
APTR-202ENST00000416650 TSR2Q969E8 191 aaKnown RBP27.95■■■□□ 2.06
APTR-202ENST00000416650 POLR2AP24928 1970 aaKnown RBP27.94■■■□□ 2.06
APTR-202ENST00000416650 DDX58O95786 925 aaKnown RBP27.94■■■□□ 2.06
APTR-202ENST00000416650 HSP90B1P14625 803 aaKnown RBP27.94■■■□□ 2.06
APTR-202ENST00000416650 CCDC27Q2M243 656 aa27.94■■■□□ 2.06
APTR-202ENST00000416650 NSFL1CQ9UNZ2 370 aaKnown RBP27.94■■■□□ 2.06
APTR-202ENST00000416650 PCCAP05165 728 aaPredicted RBP27.93■■■□□ 2.06
APTR-202ENST00000416650 GPSM2P81274 684 aa27.93■■■□□ 2.06
APTR-202ENST00000416650 TNS4Q8IZW8 715 aa27.93■■■□□ 2.06
APTR-202ENST00000416650 METTL22Q9BUU2 404 aaPredicted RBP27.93■■■□□ 2.06
APTR-202ENST00000416650 FMR1Q06787 632 aaKnown RBP eCLIP27.92■■■□□ 2.06
APTR-202ENST00000416650 WASHC4Q2M389 1173 aa27.92■■■□□ 2.06
APTR-202ENST00000416650 BCL2L13Q9BXK5 485 aa27.92■■■□□ 2.06
APTR-202ENST00000416650 CWC25Q9NXE8 425 aaPredicted RBP27.92■■■□□ 2.06
APTR-202ENST00000416650 ABT1Q9ULW3 272 aaKnown RBP27.92■■■□□ 2.06
APTR-202ENST00000416650 RPS8P62241 208 aaKnown RBP27.91■■■□□ 2.06
APTR-202ENST00000416650 DEFB115Q30KQ5 88 aa27.91■■■□□ 2.06
APTR-202ENST00000416650 POLLQ9UGP5 575 aa27.91■■■□□ 2.06
APTR-202ENST00000416650 C6orf229H3BNL8 230 aa27.9■■■□□ 2.06
APTR-202ENST00000416650 TRAF5O00463 557 aa27.9■■■□□ 2.06
APTR-202ENST00000416650 WWC1Q8IX03 1113 aa27.9■■■□□ 2.06
APTR-202ENST00000416650 SEC31BQ9NQW1 1179 aa27.9■■■□□ 2.06
APTR-202ENST00000416650 FOXN1O15353 648 aa27.89■■■□□ 2.06
APTR-202ENST00000416650 PDE8AO60658 829 aa27.89■■■□□ 2.06
APTR-202ENST00000416650 EYA3Q99504 573 aa27.89■■■□□ 2.06
APTR-202ENST00000416650 DBNDD1Q9H9R9 158 aa27.89■■■□□ 2.06
APTR-202ENST00000416650 MAP3K2Q9Y2U5 619 aa27.89■■■□□ 2.06
APTR-202ENST00000416650 CCDC152Q4G0S7 254 aa27.88■■■□□ 2.05
APTR-202ENST00000416650 STK31Q9BXU1 1019 aa27.88■■■□□ 2.05
APTR-202ENST00000416650 RIMBP2O15034 1052 aa27.87■■■□□ 2.05
APTR-202ENST00000416650 ZEB1P37275 1124 aaPredicted RBP27.87■■■□□ 2.05
APTR-202ENST00000416650 TBC1D16Q8TBP0 767 aa27.87■■■□□ 2.05
APTR-202ENST00000416650 TRPM4Q8TD43 1214 aa27.87■■■□□ 2.05
APTR-202ENST00000416650 IL16Q14005 1332 aa27.87■■■□□ 2.05
APTR-202ENST00000416650 PSMD14O00487 310 aa27.86■■■□□ 2.05
APTR-202ENST00000416650 TWISTNBQ3B726 338 aaPredicted RBP27.86■■■□□ 2.05
APTR-202ENST00000416650 KSR2Q6VAB6 950 aa27.86■■■□□ 2.05
APTR-202ENST00000416650 JARID2Q92833 1246 aaPredicted RBP27.86■■■□□ 2.05
APTR-202ENST00000416650 AIDAQ96BJ3 306 aa27.86■■■□□ 2.05
APTR-202ENST00000416650 GPR101Q96P66 508 aaPredicted RBP27.86■■■□□ 2.05
APTR-202ENST00000416650 MRS2Q9HD23 443 aa27.86■■■□□ 2.05
APTR-202ENST00000416650 PODXL2Q9NZ53 605 aa27.86■■■□□ 2.05
APTR-202ENST00000416650 PGAP2Q9UHJ9 254 aa27.86■■■□□ 2.05
APTR-202ENST00000416650 CNOT7Q9UIV1 285 aaKnown RBP27.86■■■□□ 2.05
APTR-202ENST00000416650 WDR33Q9C0J8 1336 aaKnown RBP27.86■■■□□ 2.05
APTR-202ENST00000416650 SHTN1A0MZ66 631 aa27.85■■■□□ 2.05
APTR-202ENST00000416650 PI4KAP2A4QPH2 592 aa27.85■■■□□ 2.05
APTR-202ENST00000416650 ECE2O60344 883 aa27.85■■■□□ 2.05
APTR-202ENST00000416650 NCBP3Q53F19 620 aaKnown RBP27.85■■■□□ 2.05
APTR-202ENST00000416650 CST9Q5W186 159 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms