RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 UBE3BQ7Z3V4 1068 aa18.62■□□□□ 0.57
CHD1-202ENST00000414220 SP8Q8IXZ3 490 aa18.62■□□□□ 0.57
CHD1-202ENST00000414220 SUPT20HQ8NEM7 779 aa18.62■□□□□ 0.57
CHD1-202ENST00000414220 BCL2L13Q9BXK5 485 aa18.62■□□□□ 0.57
CHD1-202ENST00000414220 TNRC6CQ9HCJ0 1690 aaKnown RBP18.61■□□□□ 0.57
CHD1-202ENST00000414220 KDM2BQ8NHM5 1336 aa18.61■□□□□ 0.57
CHD1-202ENST00000414220 DPY19L2Q6NUT2 758 aa18.61■□□□□ 0.57
CHD1-202ENST00000414220 JARID2Q92833 1246 aaPredicted RBP18.61■□□□□ 0.57
CHD1-202ENST00000414220 PSMD1Q99460 953 aa18.61■□□□□ 0.57
CHD1-202ENST00000414220 SLX4Q8IY92 1834 aa18.6■□□□□ 0.57
CHD1-202ENST00000414220 CTSWP56202 376 aa18.6■□□□□ 0.57
CHD1-202ENST00000414220 RPS8P62241 208 aaKnown RBP18.6■□□□□ 0.57
CHD1-202ENST00000414220 CDC5LQ99459 802 aaKnown RBP18.6■□□□□ 0.57
CHD1-202ENST00000414220 API5Q9BZZ5 524 aaKnown RBP18.6■□□□□ 0.57
CHD1-202ENST00000414220 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
CHD1-202ENST00000414220 IPO8O15397 1037 aaKnown RBP18.59■□□□□ 0.57
CHD1-202ENST00000414220 BRPF1P55201 1214 aaPredicted RBP18.59■□□□□ 0.57
CHD1-202ENST00000414220 DPP8Q6V1X1 898 aaPredicted RBP18.59■□□□□ 0.57
CHD1-202ENST00000414220 MPNDQ8N594 471 aa18.59■□□□□ 0.57
CHD1-202ENST00000414220 ZNF526Q8TF50 670 aaPredicted RBP18.59■□□□□ 0.57
CHD1-202ENST00000414220 JDP2Q8WYK2 163 aa18.59■□□□□ 0.57
CHD1-202ENST00000414220 VPS33BQ9H267 617 aa18.59■□□□□ 0.57
CHD1-202ENST00000414220 GRM8O00222 908 aa18.58■□□□□ 0.56
CHD1-202ENST00000414220 RARSP54136 660 aaKnown RBP18.58■□□□□ 0.56
CHD1-202ENST00000414220 OLFM4Q6UX06 510 aa18.58■□□□□ 0.56
CHD1-202ENST00000414220 ANKRD18AQ8IVF6 992 aa18.58■□□□□ 0.56
CHD1-202ENST00000414220 PLA2G12BQ9BX93 195 aa18.58■□□□□ 0.56
CHD1-202ENST00000414220 UTRNP46939 3433 aa18.58■□□□□ 0.56
CHD1-202ENST00000414220 IARSP41252 1262 aaKnown RBP18.57■□□□□ 0.56
CHD1-202ENST00000414220 TTLL11Q8NHH1 800 aa18.57■□□□□ 0.56
CHD1-202ENST00000414220 CELF1Q92879 486 aaKnown RBP18.57■□□□□ 0.56
CHD1-202ENST00000414220 CCDC85AQ96PX6 553 aaPredicted RBP18.57■□□□□ 0.56
CHD1-202ENST00000414220 ZNF277Q9NRM2 450 aaPredicted RBP18.57■□□□□ 0.56
CHD1-202ENST00000414220 NOB1Q9ULX3 412 aaKnown RBP18.57■□□□□ 0.56
CHD1-202ENST00000414220 CCT4P50991 539 aaKnown RBP18.56■□□□□ 0.56
CHD1-202ENST00000414220 ARHGAP45Q92619 1136 aa18.56■□□□□ 0.56
CHD1-202ENST00000414220 HDAC5Q9UQL6 1122 aa18.56■□□□□ 0.56
CHD1-202ENST00000414220 IGHMBP2P38935 993 aaKnown RBP18.55■□□□□ 0.56
CHD1-202ENST00000414220 LARGE2Q8N3Y3 721 aa18.55■□□□□ 0.56
CHD1-202ENST00000414220 NSFL1CQ9UNZ2 370 aaKnown RBP18.55■□□□□ 0.56
CHD1-202ENST00000414220 CACNA1SQ13698 1873 aa18.54■□□□□ 0.56
CHD1-202ENST00000414220 GLTPD2A6NH11 291 aa18.54■□□□□ 0.56
CHD1-202ENST00000414220 CASP7P55210 303 aa18.54■□□□□ 0.56
CHD1-202ENST00000414220 SEC31BQ9NQW1 1179 aa18.54■□□□□ 0.56
CHD1-202ENST00000414220 ANKRD18BA2A2Z9 1011 aa18.53■□□□□ 0.56
CHD1-202ENST00000414220 PPIP5K2O43314 1243 aa18.53■□□□□ 0.56
CHD1-202ENST00000414220 PRELPP51888 382 aa18.53■□□□□ 0.56
CHD1-202ENST00000414220 DDX60Q8IY21 1712 aaKnown RBP18.53■□□□□ 0.56
CHD1-202ENST00000414220 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
CHD1-202ENST00000414220 EYA3Q99504 573 aa18.53■□□□□ 0.56
CHD1-202ENST00000414220 MPHOSPH8Q99549 860 aa18.53■□□□□ 0.56
CHD1-202ENST00000414220 RTFDC1Q9BY42 306 aaPredicted RBP18.53■□□□□ 0.56
CHD1-202ENST00000414220 GREM2Q9H772 168 aa18.53■□□□□ 0.56
CHD1-202ENST00000414220 CHMP3Q9Y3E7 222 aa18.53■□□□□ 0.56
CHD1-202ENST00000414220 RTL9Q8NET4 1388 aa18.53■□□□□ 0.56
CHD1-202ENST00000414220 FER1L6Q2WGJ9 1857 aa18.52■□□□□ 0.56
CHD1-202ENST00000414220 C6orf229H3BNL8 230 aa18.52■□□□□ 0.56
CHD1-202ENST00000414220 CSF1RP07333 972 aa18.52■□□□□ 0.56
CHD1-202ENST00000414220 EIF6P56537 245 aaKnown RBP18.52■□□□□ 0.56
CHD1-202ENST00000414220 IFIT5Q13325 482 aaKnown RBP18.52■□□□□ 0.56
CHD1-202ENST00000414220 NIM1KQ8IY84 436 aa18.52■□□□□ 0.56
CHD1-202ENST00000414220 FRAT1Q92837 279 aaPredicted RBP18.52■□□□□ 0.56
CHD1-202ENST00000414220 ANKIB1Q9P2G1 1089 aa18.52■□□□□ 0.56
CHD1-202ENST00000414220 LAMB2P55268 1798 aa18.51■□□□□ 0.55
CHD1-202ENST00000414220 ITGA6P23229 1130 aa18.51■□□□□ 0.55
CHD1-202ENST00000414220 CCDC57Q2TAC2 916 aa18.51■□□□□ 0.55
CHD1-202ENST00000414220 TAF7LQ5H9L4 462 aa18.51■□□□□ 0.55
CHD1-202ENST00000414220 BSDC1Q9NW68 430 aaPredicted RBP18.51■□□□□ 0.55
CHD1-202ENST00000414220 WASHC4Q2M389 1173 aa18.5■□□□□ 0.55
CHD1-202ENST00000414220 SBF1O95248 1867 aa18.5■□□□□ 0.55
CHD1-202ENST00000414220 G3V3G9 751 aa18.49■□□□□ 0.55
CHD1-202ENST00000414220 DCAF8Q5TAQ9 597 aa18.49■□□□□ 0.55
CHD1-202ENST00000414220 LMBR1LQ6UX01 489 aa18.49■□□□□ 0.55
CHD1-202ENST00000414220 ZC3H12CQ9C0D7 883 aaKnown RBP18.49■□□□□ 0.55
CHD1-202ENST00000414220 PODXL2Q9NZ53 605 aa18.49■□□□□ 0.55
CHD1-202ENST00000414220 GGA1Q9UJY5 639 aa18.49■□□□□ 0.55
CHD1-202ENST00000414220 UTYO14607 1347 aa18.49■□□□□ 0.55
CHD1-202ENST00000414220 BCAR3O75815 825 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 NBPF7P0C2Y1 421 aaPredicted RBP18.48■□□□□ 0.55
CHD1-202ENST00000414220 VEGFAP15692 232 aaPredicted RBP18.48■□□□□ 0.55
CHD1-202ENST00000414220 ATP2B4P23634 1241 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 GPSM2P81274 684 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 FOXO4P98177 505 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 KIAA2012Q0VF49 1180 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 AOC3Q16853 763 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 FAM161AQ3B820 660 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 ZKSCAN2Q63HK3 967 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 ATF7IPQ6VMQ6 1270 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 ANKRD2Q9GZV1 360 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 RRAGCQ9HB90 399 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 SNED1Q8TER0 1413 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 XDHP47989 1333 aa18.48■□□□□ 0.55
CHD1-202ENST00000414220 IQCA1LA6NCM1 817 aa18.47■□□□□ 0.55
CHD1-202ENST00000414220 FZD9O00144 591 aa18.47■□□□□ 0.55
CHD1-202ENST00000414220 UFL1O94874 794 aa18.46■□□□□ 0.55
CHD1-202ENST00000414220 UBTFL1P0CB47 393 aaPredicted RBP18.46■□□□□ 0.55
CHD1-202ENST00000414220 TBC1D16Q8TBP0 767 aa18.46■□□□□ 0.55
CHD1-202ENST00000414220 SUCLG2Q96I99 432 aa18.46■□□□□ 0.55
CHD1-202ENST00000414220 USP44Q9H0E7 712 aa18.46■□□□□ 0.55
CHD1-202ENST00000414220 NMRK2Q9NPI5 230 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms