RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 LRRC37AA6NMS7 1700 aa24.98■■□□□ 1.59
CPSF7-204ENST00000413232 CNTNAP1P78357 1384 aa24.97■■□□□ 1.59
CPSF7-204ENST00000413232 RTL5Q5HYW3 569 aaPredicted RBP24.97■■□□□ 1.59
CPSF7-204ENST00000413232 PHAXQ9H814 394 aaKnown RBP24.97■■□□□ 1.59
CPSF7-204ENST00000413232 IFT57Q9NWB7 429 aa24.97■■□□□ 1.59
CPSF7-204ENST00000413232 DUOX1Q9NRD9 1551 aa24.97■■□□□ 1.59
CPSF7-204ENST00000413232 TMEM88BA6NKF7 163 aa24.96■■□□□ 1.59
CPSF7-204ENST00000413232 FMR1Q06787 632 aaKnown RBP eCLIP24.96■■□□□ 1.59
CPSF7-204ENST00000413232 CXCL9Q07325 125 aa24.96■■□□□ 1.59
CPSF7-204ENST00000413232 DPP8Q6V1X1 898 aaPredicted RBP24.96■■□□□ 1.59
CPSF7-204ENST00000413232 MPNDQ8N594 471 aa24.96■■□□□ 1.59
CPSF7-204ENST00000413232 C8orf58Q8NAV2 365 aa24.96■■□□□ 1.59
CPSF7-204ENST00000413232 TMX4Q9H1E5 349 aaPredicted RBP24.96■■□□□ 1.59
CPSF7-204ENST00000413232 VPS33BQ9H267 617 aa24.95■■□□□ 1.58
CPSF7-204ENST00000413232 LMOD1P29536 600 aaPredicted RBP24.94■■□□□ 1.58
CPSF7-204ENST00000413232 GNAI1P63096 354 aa24.94■■□□□ 1.58
CPSF7-204ENST00000413232 CELF1Q92879 486 aaKnown RBP24.94■■□□□ 1.58
CPSF7-204ENST00000413232 ZNRF3Q9ULT6 936 aa24.94■■□□□ 1.58
CPSF7-204ENST00000413232 KIAA2012Q0VF49 1180 aa24.93■■□□□ 1.58
CPSF7-204ENST00000413232 TRIM28Q13263 835 aaKnown RBP24.93■■□□□ 1.58
CPSF7-204ENST00000413232 SF3B3Q15393 1217 aaKnown RBP24.93■■□□□ 1.58
CPSF7-204ENST00000413232 SUPT20HQ8NEM7 779 aa24.93■■□□□ 1.58
CPSF7-204ENST00000413232 TRPM7Q96QT4 1865 aa24.93■■□□□ 1.58
CPSF7-204ENST00000413232 VEGFBP49765 207 aa24.92■■□□□ 1.58
CPSF7-204ENST00000413232 YDJCA8MPS7 323 aa24.91■■□□□ 1.58
CPSF7-204ENST00000413232 RIC3Q7Z5B4 369 aa24.91■■□□□ 1.58
CPSF7-204ENST00000413232 TSPYL6Q8N831 410 aa24.91■■□□□ 1.58
CPSF7-204ENST00000413232 GPRC5DQ9NZD1 345 aa24.91■■□□□ 1.58
CPSF7-204ENST00000413232 IRS4O14654 1257 aaPredicted RBP24.89■■□□□ 1.58
CPSF7-204ENST00000413232 RAD17O75943 681 aa24.89■■□□□ 1.58
CPSF7-204ENST00000413232 GMPSP49915 693 aaPredicted RBP24.89■■□□□ 1.58
CPSF7-204ENST00000413232 USP50Q70EL3 339 aaPredicted RBP24.89■■□□□ 1.58
CPSF7-204ENST00000413232 TRAF5O00463 557 aa24.88■■□□□ 1.57
CPSF7-204ENST00000413232 CALD1Q05682 793 aaKnown RBP24.88■■□□□ 1.57
CPSF7-204ENST00000413232 JARID2Q92833 1246 aaPredicted RBP24.88■■□□□ 1.57
CPSF7-204ENST00000413232 MYD88Q99836 296 aa24.88■■□□□ 1.57
CPSF7-204ENST00000413232 SHTN1A0MZ66 631 aa24.87■■□□□ 1.57
CPSF7-204ENST00000413232 GOLGA2Q08379 1002 aa24.87■■□□□ 1.57
CPSF7-204ENST00000413232 CIAPIN1Q6FI81 312 aa24.87■■□□□ 1.57
CPSF7-204ENST00000413232 TMC4Q7Z404 712 aa24.87■■□□□ 1.57
CPSF7-204ENST00000413232 ADARB2Q9NS39 739 aaKnown RBP24.87■■□□□ 1.57
CPSF7-204ENST00000413232 POLR2AP24928 1970 aaKnown RBP24.87■■□□□ 1.57
CPSF7-204ENST00000413232 RASSF10A6NK89 507 aa24.86■■□□□ 1.57
CPSF7-204ENST00000413232 FOXN1O15353 648 aa24.86■■□□□ 1.57
CPSF7-204ENST00000413232 GPSM2P81274 684 aa24.86■■□□□ 1.57
CPSF7-204ENST00000413232 ZBTB38Q8NAP3 1195 aaPredicted RBP24.86■■□□□ 1.57
CPSF7-204ENST00000413232 TSR2Q969E8 191 aaKnown RBP24.86■■□□□ 1.57
CPSF7-204ENST00000413232 SEC31BQ9NQW1 1179 aa24.86■■□□□ 1.57
CPSF7-204ENST00000413232 POLLQ9UGP5 575 aa24.86■■□□□ 1.57
CPSF7-204ENST00000413232 NSFL1CQ9UNZ2 370 aaKnown RBP24.86■■□□□ 1.57
CPSF7-204ENST00000413232 DEFB115Q30KQ5 88 aa24.85■■□□□ 1.57
CPSF7-204ENST00000413232 CST9Q5W186 159 aa24.85■■□□□ 1.57
CPSF7-204ENST00000413232 TNS4Q8IZW8 715 aa24.85■■□□□ 1.57
CPSF7-204ENST00000413232 SCN9AQ15858 1988 aa24.85■■□□□ 1.57
CPSF7-204ENST00000413232 HIRAP54198 1017 aaPredicted RBP24.84■■□□□ 1.57
CPSF7-204ENST00000413232 GPR101Q96P66 508 aaPredicted RBP24.84■■□□□ 1.57
CPSF7-204ENST00000413232 RIMBP2O15034 1052 aa24.83■■□□□ 1.57
CPSF7-204ENST00000413232 RPS8P62241 208 aaKnown RBP24.83■■□□□ 1.57
CPSF7-204ENST00000413232 DBNDD1Q9H9R9 158 aa24.83■■□□□ 1.57
CPSF7-204ENST00000413232 WASHC4Q2M389 1173 aa24.82■■□□□ 1.56
CPSF7-204ENST00000413232 CCDC30Q5VVM6 783 aa24.82■■□□□ 1.56
CPSF7-204ENST00000413232 CCDC191Q8NCU4 936 aa24.82■■□□□ 1.56
CPSF7-204ENST00000413232 TRPM4Q8TD43 1214 aa24.82■■□□□ 1.56
CPSF7-204ENST00000413232 METTL22Q9BUU2 404 aaPredicted RBP24.82■■□□□ 1.56
CPSF7-204ENST00000413232 KCNQ5Q9NR82 932 aa24.82■■□□□ 1.56
CPSF7-204ENST00000413232 ABT1Q9ULW3 272 aaKnown RBP24.82■■□□□ 1.56
CPSF7-204ENST00000413232 ZBTB12Q9Y330 459 aaPredicted RBP24.82■■□□□ 1.56
CPSF7-204ENST00000413232 C6orf229H3BNL8 230 aa24.81■■□□□ 1.56
CPSF7-204ENST00000413232 PCCAP05165 728 aaPredicted RBP24.81■■□□□ 1.56
CPSF7-204ENST00000413232 TNIP1Q15025 636 aa24.81■■□□□ 1.56
CPSF7-204ENST00000413232 WWC1Q8IX03 1113 aa24.81■■□□□ 1.56
CPSF7-204ENST00000413232 BCL2L13Q9BXK5 485 aa24.81■■□□□ 1.56
CPSF7-204ENST00000413232 CCDC85AQ96PX6 553 aaPredicted RBP24.8■■□□□ 1.56
CPSF7-204ENST00000413232 WBP1LQ9NX94 342 aa24.8■■□□□ 1.56
CPSF7-204ENST00000413232 PGAP2Q9UHJ9 254 aa24.8■■□□□ 1.56
CPSF7-204ENST00000413232 CNOT7Q9UIV1 285 aaKnown RBP24.8■■□□□ 1.56
CPSF7-204ENST00000413232 MAP3K2Q9Y2U5 619 aa24.8■■□□□ 1.56
CPSF7-204ENST00000413232 WDR33Q9C0J8 1336 aaKnown RBP24.8■■□□□ 1.56
CPSF7-204ENST00000413232 MYH3P11055 1940 aa24.79■■□□□ 1.56
CPSF7-204ENST00000413232 PSMD14O00487 310 aa24.79■■□□□ 1.56
CPSF7-204ENST00000413232 CAPN15O75808 1086 aa24.79■■□□□ 1.56
CPSF7-204ENST00000413232 DOK7Q18PE1 504 aa24.79■■□□□ 1.56
CPSF7-204ENST00000413232 TBC1D16Q8TBP0 767 aa24.79■■□□□ 1.56
CPSF7-204ENST00000413232 GLIS2Q9BZE0 524 aaPredicted RBP24.79■■□□□ 1.56
CPSF7-204ENST00000413232 CWC25Q9NXE8 425 aaPredicted RBP24.79■■□□□ 1.56
CPSF7-204ENST00000413232 IGKV5-2P06315 115 aa24.78■■□□□ 1.56
CPSF7-204ENST00000413232 CCDC27Q2M243 656 aa24.78■■□□□ 1.56
CPSF7-204ENST00000413232 G2E3Q7L622 706 aa24.78■■□□□ 1.56
CPSF7-204ENST00000413232 CDHR2Q9BYE9 1310 aa24.78■■□□□ 1.56
CPSF7-204ENST00000413232 RTL9Q8NET4 1388 aa24.78■■□□□ 1.56
CPSF7-204ENST00000413232 PI4KAP2A4QPH2 592 aa24.77■■□□□ 1.56
CPSF7-204ENST00000413232 PDE8AO60658 829 aa24.77■■□□□ 1.56
CPSF7-204ENST00000413232 MICALL2Q8IY33 904 aa24.77■■□□□ 1.56
CPSF7-204ENST00000413232 PI4KAP1Q8N8J0 262 aa24.77■■□□□ 1.56
CPSF7-204ENST00000413232 SPEF2Q9C093 1822 aa24.77■■□□□ 1.56
CPSF7-204ENST00000413232 ECE2O60344 883 aa24.76■■□□□ 1.55
CPSF7-204ENST00000413232 DDX58O95786 925 aaKnown RBP24.76■■□□□ 1.55
CPSF7-204ENST00000413232 EGFRP00533 1210 aa24.76■■□□□ 1.55
CPSF7-204ENST00000413232 KSR2Q6VAB6 950 aa24.76■■□□□ 1.55
CPSF7-204ENST00000413232 CYP4F22Q6NT55 531 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms