RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 ATP4AP20648 1035 aa8.07□□□□□ -1.12
LINC00342-201ENST00000412393 ALAS2P22557 587 aa8.07□□□□□ -1.12
LINC00342-201ENST00000412393 BANK1Q8NDB2 785 aa8.07□□□□□ -1.12
LINC00342-201ENST00000412393 KLF15Q9UIH9 416 aa8.07□□□□□ -1.12
LINC00342-201ENST00000412393 PTPRTO14522 1441 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 DAPK1P53355 1430 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 NCOA1Q15788 1441 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 DYRK3O43781 588 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 PLA2G4AP47712 749 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 NBPF1Q3BBV0 1214 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 NBPF11Q86T75 865 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 CCDC85AQ96PX6 553 aaPredicted RBP8.06□□□□□ -1.12
LINC00342-201ENST00000412393 ETNK1Q9HBU6 452 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 NDUFB9Q9Y6M9 179 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 PZPP20742 1482 aa8.06□□□□□ -1.12
LINC00342-201ENST00000412393 MROH1Q8NDA8 1641 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 ELOA3CA0A087WX78 387 aaPredicted RBP8.05□□□□□ -1.12
LINC00342-201ENST00000412393 ELOA3DA6NLF2 546 aaPredicted RBP8.05□□□□□ -1.12
LINC00342-201ENST00000412393 ELOA3BQ3SY89 546 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 SAMD5Q5TGI4 173 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 ELOA3Q8NG57 546 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 CDCA7Q9BWT1 371 aaPredicted RBP8.05□□□□□ -1.12
LINC00342-201ENST00000412393 ZDHHC3Q9NYG2 299 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 PRR12Q9ULL5 1215 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 TNRQ92752 1358 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 KIF15Q9NS87 1388 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 A2ML1A8K2U0 1454 aa8.05□□□□□ -1.12
LINC00342-201ENST00000412393 ABCC3O15438 1527 aa8.04□□□□□ -1.12
LINC00342-201ENST00000412393 POLR1AO95602 1720 aaPredicted RBP8.04□□□□□ -1.12
LINC00342-201ENST00000412393 BTBD11A6QL63 1104 aa8.04□□□□□ -1.12
LINC00342-201ENST00000412393 TATP17735 454 aaPredicted RBP8.04□□□□□ -1.12
LINC00342-201ENST00000412393 PRDM6Q9NQX0 595 aa8.04□□□□□ -1.12
LINC00342-201ENST00000412393 TPSG1Q9NRR2 321 aa8.04□□□□□ -1.12
LINC00342-201ENST00000412393 RRP7BPQ9NSQ0 103 aa8.04□□□□□ -1.12
LINC00342-201ENST00000412393 PLA2R1Q13018 1463 aa8.04□□□□□ -1.12
LINC00342-201ENST00000412393 ERBINQ96RT1 1412 aa8.03□□□□□ -1.12
LINC00342-201ENST00000412393 ANKRD30AQ9BXX3 1397 aa8.03□□□□□ -1.12
LINC00342-201ENST00000412393 A0A1W2PNR3 127 aa8.03□□□□□ -1.12
LINC00342-201ENST00000412393 CD33P20138 364 aa8.03□□□□□ -1.12
LINC00342-201ENST00000412393 FAM50AQ14320 339 aaKnown RBP8.03□□□□□ -1.12
LINC00342-201ENST00000412393 FOXD4L6Q3SYB3 417 aaPredicted RBP8.03□□□□□ -1.12
LINC00342-201ENST00000412393 ARSJQ5FYB0 599 aaPredicted RBP8.03□□□□□ -1.12
LINC00342-201ENST00000412393 FOXD4L3Q6VB84 417 aaPredicted RBP8.03□□□□□ -1.12
LINC00342-201ENST00000412393 CHIC2Q9UKJ5 165 aa8.03□□□□□ -1.12
LINC00342-201ENST00000412393 DOLKQ9UPQ8 538 aa8.03□□□□□ -1.12
LINC00342-201ENST00000412393 DEPDC5O75140 1603 aa8.03□□□□□ -1.12
LINC00342-201ENST00000412393 DCDC2BA2VCK2 349 aa8.02□□□□□ -1.13
LINC00342-201ENST00000412393 KHNYNO15037 678 aaKnown RBP8.02□□□□□ -1.13
LINC00342-201ENST00000412393 PRDM15P57071 1507 aaPredicted RBP8.02□□□□□ -1.13
LINC00342-201ENST00000412393 SPATA31D1Q6ZQQ2 1576 aa8.01□□□□□ -1.13
LINC00342-201ENST00000412393 NLRP1Q9C000 1473 aa8.01□□□□□ -1.13
LINC00342-201ENST00000412393 LTBP4Q8N2S1 1624 aa8.01□□□□□ -1.13
LINC00342-201ENST00000412393 INHAP05111 366 aa8.01□□□□□ -1.13
LINC00342-201ENST00000412393 H2AFB1P0C5Y9 115 aa8.01□□□□□ -1.13
LINC00342-201ENST00000412393 H2AFB2P0C5Z0 115 aa8.01□□□□□ -1.13
LINC00342-201ENST00000412393 PCBP4P57723 403 aaKnown RBP8.01□□□□□ -1.13
LINC00342-201ENST00000412393 AIDAQ96BJ3 306 aa8.01□□□□□ -1.13
LINC00342-201ENST00000412393 MARK1Q9P0L2 795 aa8.01□□□□□ -1.13
LINC00342-201ENST00000412393 ADGRL2O95490 1459 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 ERVK-7P63135 1459 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 KANK1Q14678 1352 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 ADARB2-AS1A8MUL3 147 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 GPR37L1O60883 481 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 SIN3BO75182 1162 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 LRP8Q14114 963 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 PRSS36Q5K4E3 855 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 MDFIQ99750 246 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 GJA3Q9Y6H8 435 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 UGGT1Q9NYU2 1555 aa8□□□□□ -1.13
LINC00342-201ENST00000412393 EFSO43281 561 aa7.99□□□□□ -1.13
LINC00342-201ENST00000412393 SMTNP53814 917 aa7.99□□□□□ -1.13
LINC00342-201ENST00000412393 EIF4G2P78344 907 aaKnown RBP eCLIP7.99□□□□□ -1.13
LINC00342-201ENST00000412393 TRIM28Q13263 835 aaKnown RBP7.99□□□□□ -1.13
LINC00342-201ENST00000412393 UBR1Q8IWV7 1749 aa7.99□□□□□ -1.13
LINC00342-201ENST00000412393 THEMISQ8N1K5 641 aaPredicted RBP7.99□□□□□ -1.13
LINC00342-201ENST00000412393 PHTF2Q8N3S3 785 aa7.99□□□□□ -1.13
LINC00342-201ENST00000412393 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.98□□□□□ -1.13
LINC00342-201ENST00000412393 NEURL4Q96JN8 1562 aa7.98□□□□□ -1.13
LINC00342-201ENST00000412393 ARHGAP31Q2M1Z3 1444 aa7.98□□□□□ -1.13
LINC00342-201ENST00000412393 SLFNL1Q499Z3 407 aa7.98□□□□□ -1.13
LINC00342-201ENST00000412393 ANKLE2Q86XL3 938 aa7.98□□□□□ -1.13
LINC00342-201ENST00000412393 HCN2Q9UL51 889 aa7.98□□□□□ -1.13
LINC00342-201ENST00000412393 VWDEQ8N2E2 1590 aa7.97□□□□□ -1.13
LINC00342-201ENST00000412393 ANKRD50Q9ULJ7 1429 aa7.97□□□□□ -1.13
LINC00342-201ENST00000412393 C9orf172C9J069 976 aa7.97□□□□□ -1.13
LINC00342-201ENST00000412393 CDK2AP1O14519 115 aa7.97□□□□□ -1.13
LINC00342-201ENST00000412393 SCNN1DP51172 638 aa7.97□□□□□ -1.13
LINC00342-201ENST00000412393 GDF10P55107 478 aa7.97□□□□□ -1.13
LINC00342-201ENST00000412393 ZIC5Q96T25 663 aa7.97□□□□□ -1.13
LINC00342-201ENST00000412393 GPC6Q9Y625 555 aaPredicted RBP7.97□□□□□ -1.13
LINC00342-201ENST00000412393 LMTK2Q8IWU2 1503 aa7.97□□□□□ -1.13
LINC00342-201ENST00000412393 ZNF335Q9H4Z2 1342 aaPredicted RBP7.97□□□□□ -1.13
LINC00342-201ENST00000412393 PIK3C2BO00750 1634 aa7.96□□□□□ -1.13
LINC00342-201ENST00000412393 IQGAP1P46940 1657 aa7.96□□□□□ -1.13
LINC00342-201ENST00000412393 IQSEC2Q5JU85 1478 aa7.96□□□□□ -1.13
LINC00342-201ENST00000412393 ZNF295-AS1Q8N0V1 137 aa7.96□□□□□ -1.14
LINC00342-201ENST00000412393 TNFRSF25Q93038 417 aa7.96□□□□□ -1.14
LINC00342-201ENST00000412393 SLC4A9Q96Q91 983 aa7.96□□□□□ -1.14
LINC00342-201ENST00000412393 EFCAB6Q5THR3 1501 aa7.95□□□□□ -1.14
LINC00342-201ENST00000412393 NEUROD1Q13562 356 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms