RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 POTEJP0CG39 1038 aa13.06□□□□□ -0.32
LINC01643-201ENST00000412218 HTRA3P83110 453 aa13.06□□□□□ -0.32
LINC01643-201ENST00000412218 TMC4Q7Z404 712 aa13.06□□□□□ -0.32
LINC01643-201ENST00000412218 GPC2Q8N158 579 aa13.06□□□□□ -0.32
LINC01643-201ENST00000412218 LARGE2Q8N3Y3 721 aa13.06□□□□□ -0.32
LINC01643-201ENST00000412218 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
LINC01643-201ENST00000412218 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
LINC01643-201ENST00000412218 DUOX1Q9NRD9 1551 aa13.06□□□□□ -0.32
LINC01643-201ENST00000412218 CEP350Q5VT06 3117 aa13.06□□□□□ -0.32
LINC01643-201ENST00000412218 COL4A1P02462 1669 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 SCN4AP35499 1836 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 PPIP5K2O43314 1243 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 EIF6P56537 245 aaKnown RBP13.05□□□□□ -0.32
LINC01643-201ENST00000412218 AOC3Q16853 763 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
LINC01643-201ENST00000412218 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 DPP8Q6V1X1 898 aaPredicted RBP13.05□□□□□ -0.32
LINC01643-201ENST00000412218 WDR63Q8IWG1 891 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 NIM1KQ8IY84 436 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 CCDC191Q8NCU4 936 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 VPS33BQ9H267 617 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 MAP3K2Q9Y2U5 619 aa13.05□□□□□ -0.32
LINC01643-201ENST00000412218 ADAMTSL1Q8N6G6 1762 aa13.04□□□□□ -0.32
LINC01643-201ENST00000412218 LDHDQ86WU2 507 aa13.04□□□□□ -0.32
LINC01643-201ENST00000412218 MPNDQ8N594 471 aa13.04□□□□□ -0.32
LINC01643-201ENST00000412218 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
LINC01643-201ENST00000412218 CWC25Q9NXE8 425 aaPredicted RBP13.04□□□□□ -0.32
LINC01643-201ENST00000412218 HACL1Q9UJ83 578 aa13.04□□□□□ -0.32
LINC01643-201ENST00000412218 SALL2Q9Y467 1007 aaPredicted RBP13.04□□□□□ -0.32
LINC01643-201ENST00000412218 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
LINC01643-201ENST00000412218 PCCAP05165 728 aaPredicted RBP13.03□□□□□ -0.32
LINC01643-201ENST00000412218 EPHX2P34913 555 aa13.03□□□□□ -0.32
LINC01643-201ENST00000412218 KSR2Q6VAB6 950 aa13.03□□□□□ -0.32
LINC01643-201ENST00000412218 FAM9BQ8IZU0 186 aa13.03□□□□□ -0.32
LINC01643-201ENST00000412218 LTBP1Q14766 1721 aa13.02□□□□□ -0.32
LINC01643-201ENST00000412218 PI4KAP2A4QPH2 592 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 SLC4A2P04920 1241 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 IGKV5-2P06315 115 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 HSP90B1P14625 803 aaKnown RBP13.02□□□□□ -0.33
LINC01643-201ENST00000412218 KIAA2012Q0VF49 1180 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 G2E3Q7L622 706 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 PI4KAP1Q8N8J0 262 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 KLRG1Q96E93 195 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 SPINK5Q9NQ38 1064 aaPredicted RBP13.02□□□□□ -0.33
LINC01643-201ENST00000412218 GJA3Q9Y6H8 435 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 CDHR2Q9BYE9 1310 aa13.02□□□□□ -0.33
LINC01643-201ENST00000412218 PDE8AO60658 829 aa13.01□□□□□ -0.33
LINC01643-201ENST00000412218 SCNN1DP51172 638 aa13.01□□□□□ -0.33
LINC01643-201ENST00000412218 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
LINC01643-201ENST00000412218 EAPPQ56P03 285 aaPredicted RBP13.01□□□□□ -0.33
LINC01643-201ENST00000412218 PNMA8AQ86V59 439 aaPredicted RBP13.01□□□□□ -0.33
LINC01643-201ENST00000412218 ZNRF3Q9ULT6 936 aa13.01□□□□□ -0.33
LINC01643-201ENST00000412218 PASKQ96RG2 1323 aa13□□□□□ -0.33
LINC01643-201ENST00000412218 VAMP4O75379 141 aa13□□□□□ -0.33
LINC01643-201ENST00000412218 NEFLP07196 543 aa13□□□□□ -0.33
LINC01643-201ENST00000412218 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
LINC01643-201ENST00000412218 FLIIQ13045 1269 aa13□□□□□ -0.33
LINC01643-201ENST00000412218 CCDC152Q4G0S7 254 aa13□□□□□ -0.33
LINC01643-201ENST00000412218 JARID2Q92833 1246 aaPredicted RBP13□□□□□ -0.33
LINC01643-201ENST00000412218 SEC31BQ9NQW1 1179 aa13□□□□□ -0.33
LINC01643-201ENST00000412218 TAF1P21675 1872 aa12.99□□□□□ -0.33
LINC01643-201ENST00000412218 ZNF521Q96K83 1311 aa12.99□□□□□ -0.33
LINC01643-201ENST00000412218 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
LINC01643-201ENST00000412218 LMOD1P29536 600 aaPredicted RBP12.99□□□□□ -0.33
LINC01643-201ENST00000412218 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
LINC01643-201ENST00000412218 GPSM2P81274 684 aa12.99□□□□□ -0.33
LINC01643-201ENST00000412218 CXCL9Q07325 125 aa12.99□□□□□ -0.33
LINC01643-201ENST00000412218 CWF19L2Q2TBE0 894 aaKnown RBP12.99□□□□□ -0.33
LINC01643-201ENST00000412218 JMYQ8N9B5 988 aa12.99□□□□□ -0.33
LINC01643-201ENST00000412218 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
LINC01643-201ENST00000412218 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
LINC01643-201ENST00000412218 ITGBL1O95965 494 aaPredicted RBP12.98□□□□□ -0.33
LINC01643-201ENST00000412218 EPS15P42566 896 aa12.98□□□□□ -0.33
LINC01643-201ENST00000412218 CTSWP56202 376 aa12.98□□□□□ -0.33
LINC01643-201ENST00000412218 FKBP5Q13451 457 aaPredicted RBP12.98□□□□□ -0.33
LINC01643-201ENST00000412218 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
LINC01643-201ENST00000412218 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
LINC01643-201ENST00000412218 CLEC11AQ9Y240 323 aa12.98□□□□□ -0.33
LINC01643-201ENST00000412218 YDJCA8MPS7 323 aa12.97□□□□□ -0.33
LINC01643-201ENST00000412218 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
LINC01643-201ENST00000412218 CIAPIN1Q6FI81 312 aa12.97□□□□□ -0.33
LINC01643-201ENST00000412218 TBC1D16Q8TBP0 767 aa12.97□□□□□ -0.33
LINC01643-201ENST00000412218 CCDC85AQ96PX6 553 aaPredicted RBP12.97□□□□□ -0.33
LINC01643-201ENST00000412218 PODXL2Q9NZ53 605 aa12.97□□□□□ -0.33
LINC01643-201ENST00000412218 GPRC5DQ9NZD1 345 aa12.97□□□□□ -0.33
LINC01643-201ENST00000412218 RTL9Q8NET4 1388 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 C6orf229H3BNL8 230 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 H7C1W4 665 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 RAD17O75943 681 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.33
LINC01643-201ENST00000412218 GCKRQ14397 625 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 TNIP1Q15025 636 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 MAP1SQ66K74 1059 aaPredicted RBP12.96□□□□□ -0.33
LINC01643-201ENST00000412218 USP50Q70EL3 339 aaPredicted RBP12.96□□□□□ -0.33
LINC01643-201ENST00000412218 UBE3BQ7Z3V4 1068 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 TTLL11Q8NHH1 800 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 DNAAF4Q8WXU2 420 aa12.96□□□□□ -0.33
LINC01643-201ENST00000412218 EYA3Q99504 573 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms