RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 NIM1KQ8IY84 436 aa21.48■■□□□ 1.03
SCAMP4-203ENST00000411971 C8orf58Q8NAV2 365 aa21.48■■□□□ 1.03
SCAMP4-203ENST00000411971 GRAPLQ8TC17 118 aaPredicted RBP21.48■■□□□ 1.03
SCAMP4-203ENST00000411971 CELF1Q92879 486 aaKnown RBP21.48■■□□□ 1.03
SCAMP4-203ENST00000411971 BBOX1O75936 387 aa21.47■■□□□ 1.03
SCAMP4-203ENST00000411971 GRIPAP1Q4V328 841 aa21.47■■□□□ 1.03
SCAMP4-203ENST00000411971 PNMA8AQ86V59 439 aaPredicted RBP21.47■■□□□ 1.03
SCAMP4-203ENST00000411971 TRPM7Q96QT4 1865 aa21.47■■□□□ 1.03
SCAMP4-203ENST00000411971 VEGFBP49765 207 aa21.46■■□□□ 1.03
SCAMP4-203ENST00000411971 DDX46Q7L014 1031 aaKnown RBP21.46■■□□□ 1.03
SCAMP4-203ENST00000411971 MPNDQ8N594 471 aa21.46■■□□□ 1.03
SCAMP4-203ENST00000411971 IFT57Q9NWB7 429 aa21.46■■□□□ 1.03
SCAMP4-203ENST00000411971 HYPKQ9NX55 129 aa21.46■■□□□ 1.03
SCAMP4-203ENST00000411971 SHTN1A0MZ66 631 aa21.45■■□□□ 1.02
SCAMP4-203ENST00000411971 TMEM88BA6NKF7 163 aa21.45■■□□□ 1.02
SCAMP4-203ENST00000411971 YDJCA8MPS7 323 aa21.45■■□□□ 1.02
SCAMP4-203ENST00000411971 DPP8Q6V1X1 898 aaPredicted RBP21.45■■□□□ 1.02
SCAMP4-203ENST00000411971 TSPYL6Q8N831 410 aa21.45■■□□□ 1.02
SCAMP4-203ENST00000411971 KIAA2012Q0VF49 1180 aa21.44■■□□□ 1.02
SCAMP4-203ENST00000411971 SF3B3Q15393 1217 aaKnown RBP21.44■■□□□ 1.02
SCAMP4-203ENST00000411971 JARID2Q92833 1246 aaPredicted RBP21.44■■□□□ 1.02
SCAMP4-203ENST00000411971 ZNRF3Q9ULT6 936 aa21.44■■□□□ 1.02
SCAMP4-203ENST00000411971 SCN9AQ15858 1988 aa21.43■■□□□ 1.02
SCAMP4-203ENST00000411971 TRAF5O00463 557 aa21.43■■□□□ 1.02
SCAMP4-203ENST00000411971 TRIM28Q13263 835 aaKnown RBP21.43■■□□□ 1.02
SCAMP4-203ENST00000411971 GPRC5DQ9NZD1 345 aa21.43■■□□□ 1.02
SCAMP4-203ENST00000411971 RAD17O75943 681 aa21.42■■□□□ 1.02
SCAMP4-203ENST00000411971 GMPSP49915 693 aaPredicted RBP21.42■■□□□ 1.02
SCAMP4-203ENST00000411971 GNAI1P63096 354 aa21.42■■□□□ 1.02
SCAMP4-203ENST00000411971 GPR101Q96P66 508 aaPredicted RBP21.42■■□□□ 1.02
SCAMP4-203ENST00000411971 VPS33BQ9H267 617 aa21.42■■□□□ 1.02
SCAMP4-203ENST00000411971 FOXN1O15353 648 aa21.41■■□□□ 1.02
SCAMP4-203ENST00000411971 LMOD1P29536 600 aaPredicted RBP21.41■■□□□ 1.02
SCAMP4-203ENST00000411971 SEC31BQ9NQW1 1179 aa21.41■■□□□ 1.02
SCAMP4-203ENST00000411971 IRS4O14654 1257 aaPredicted RBP21.4■■□□□ 1.02
SCAMP4-203ENST00000411971 HIRAP54198 1017 aaPredicted RBP21.4■■□□□ 1.02
SCAMP4-203ENST00000411971 GPSM2P81274 684 aa21.4■■□□□ 1.02
SCAMP4-203ENST00000411971 RIC3Q7Z5B4 369 aa21.4■■□□□ 1.02
SCAMP4-203ENST00000411971 SUPT20HQ8NEM7 779 aa21.4■■□□□ 1.02
SCAMP4-203ENST00000411971 TSR2Q969E8 191 aaKnown RBP21.4■■□□□ 1.02
SCAMP4-203ENST00000411971 MYD88Q99836 296 aa21.4■■□□□ 1.02
SCAMP4-203ENST00000411971 POLLQ9UGP5 575 aa21.4■■□□□ 1.02
SCAMP4-203ENST00000411971 POLR2AP24928 1970 aaKnown RBP21.39■■□□□ 1.02
SCAMP4-203ENST00000411971 RASSF10A6NK89 507 aa21.39■■□□□ 1.01
SCAMP4-203ENST00000411971 CST9Q5W186 159 aa21.39■■□□□ 1.01
SCAMP4-203ENST00000411971 USP50Q70EL3 339 aaPredicted RBP21.39■■□□□ 1.01
SCAMP4-203ENST00000411971 KCNQ5Q9NR82 932 aa21.39■■□□□ 1.01
SCAMP4-203ENST00000411971 CIAPIN1Q6FI81 312 aa21.38■■□□□ 1.01
SCAMP4-203ENST00000411971 TNS4Q8IZW8 715 aa21.38■■□□□ 1.01
SCAMP4-203ENST00000411971 TRPM4Q8TD43 1214 aa21.38■■□□□ 1.01
SCAMP4-203ENST00000411971 TMX4Q9H1E5 349 aaPredicted RBP21.38■■□□□ 1.01
SCAMP4-203ENST00000411971 SPEF2Q9C093 1822 aa21.38■■□□□ 1.01
SCAMP4-203ENST00000411971 DBNDD1Q9H9R9 158 aa21.37■■□□□ 1.01
SCAMP4-203ENST00000411971 ADARB2Q9NS39 739 aaKnown RBP21.37■■□□□ 1.01
SCAMP4-203ENST00000411971 NSFL1CQ9UNZ2 370 aaKnown RBP21.37■■□□□ 1.01
SCAMP4-203ENST00000411971 ZBTB12Q9Y330 459 aaPredicted RBP21.37■■□□□ 1.01
SCAMP4-203ENST00000411971 THSD7BQ9C0I4 1608 aa21.37■■□□□ 1.01
SCAMP4-203ENST00000411971 RIMBP2O15034 1052 aa21.36■■□□□ 1.01
SCAMP4-203ENST00000411971 GOLGA2Q08379 1002 aa21.36■■□□□ 1.01
SCAMP4-203ENST00000411971 DLK2Q6UY11 383 aa21.36■■□□□ 1.01
SCAMP4-203ENST00000411971 ZBTB38Q8NAP3 1195 aaPredicted RBP21.36■■□□□ 1.01
SCAMP4-203ENST00000411971 MYH3P11055 1940 aa21.35■■□□□ 1.01
SCAMP4-203ENST00000411971 CAPN15O75808 1086 aa21.35■■□□□ 1.01
SCAMP4-203ENST00000411971 DEFB115Q30KQ5 88 aa21.35■■□□□ 1.01
SCAMP4-203ENST00000411971 G2E3Q7L622 706 aa21.35■■□□□ 1.01
SCAMP4-203ENST00000411971 CCDC85AQ96PX6 553 aaPredicted RBP21.35■■□□□ 1.01
SCAMP4-203ENST00000411971 GLIS2Q9BZE0 524 aaPredicted RBP21.35■■□□□ 1.01
SCAMP4-203ENST00000411971 RTL9Q8NET4 1388 aa21.35■■□□□ 1.01
SCAMP4-203ENST00000411971 PSMD14O00487 310 aa21.34■■□□□ 1.01
SCAMP4-203ENST00000411971 EGFRP00533 1210 aa21.34■■□□□ 1.01
SCAMP4-203ENST00000411971 IGKV5-2P06315 115 aa21.34■■□□□ 1.01
SCAMP4-203ENST00000411971 RPS8P62241 208 aaKnown RBP21.34■■□□□ 1.01
SCAMP4-203ENST00000411971 TMC4Q7Z404 712 aa21.34■■□□□ 1.01
SCAMP4-203ENST00000411971 WWC1Q8IX03 1113 aa21.34■■□□□ 1.01
SCAMP4-203ENST00000411971 METTL22Q9BUU2 404 aaPredicted RBP21.34■■□□□ 1.01
SCAMP4-203ENST00000411971 ABT1Q9ULW3 272 aaKnown RBP21.34■■□□□ 1.01
SCAMP4-203ENST00000411971 WTIPA6NIX2 430 aaPredicted RBP21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 PCCAP05165 728 aaPredicted RBP21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 CALD1Q05682 793 aaKnown RBP21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 DOK7Q18PE1 504 aa21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 WASHC4Q2M389 1173 aa21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 TBC1D16Q8TBP0 767 aa21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 WBP1LQ9NX94 342 aa21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 PGAP2Q9UHJ9 254 aa21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 CNOT7Q9UIV1 285 aaKnown RBP21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 MAP3K2Q9Y2U5 619 aa21.33■■□□□ 1.01
SCAMP4-203ENST00000411971 WDR33Q9C0J8 1336 aaKnown RBP21.32■■□□□ 1
SCAMP4-203ENST00000411971 PSME4Q14997 1843 aa21.32■■□□□ 1
SCAMP4-203ENST00000411971 CCDC191Q8NCU4 936 aa21.32■■□□□ 1
SCAMP4-203ENST00000411971 BCL2L13Q9BXK5 485 aa21.32■■□□□ 1
SCAMP4-203ENST00000411971 ZNF646O15015 1829 aaPredicted RBP21.32■■□□□ 1
SCAMP4-203ENST00000411971 C6orf229H3BNL8 230 aa21.31■■□□□ 1
SCAMP4-203ENST00000411971 TNIP1Q15025 636 aa21.31■■□□□ 1
SCAMP4-203ENST00000411971 CCDC30Q5VVM6 783 aa21.31■■□□□ 1
SCAMP4-203ENST00000411971 MICALL2Q8IY33 904 aa21.31■■□□□ 1
SCAMP4-203ENST00000411971 CWC25Q9NXE8 425 aaPredicted RBP21.31■■□□□ 1
SCAMP4-203ENST00000411971 PI4KAP2A4QPH2 592 aa21.3■■□□□ 1
SCAMP4-203ENST00000411971 ECE2O60344 883 aa21.3■■□□□ 1
SCAMP4-203ENST00000411971 CCDC27Q2M243 656 aa21.3■■□□□ 1
SCAMP4-203ENST00000411971 CYP4F22Q6NT55 531 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms