RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TBC1D31Q96DN5 1066 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TEX12Q9BXU0 123 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TERF2IPQ9NYB0 399 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 SUFUQ9UMX1 484 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 SF3A3Q12874 501 aaKnown RBP eCLIP5.2□□□□□ -1.58
PTPN13-202ENST00000411767 SPOUT1Q5T280 376 aaKnown RBP5.2□□□□□ -1.58
PTPN13-202ENST00000411767 FYB2Q5VWT5 728 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TTC21AQ8NDW8 1320 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TBC1D22AQ8WUA7 517 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TEKT1Q969V4 418 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 NINLQ9Y2I6 1382 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 RGS5O15539 181 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 PDE6AP16499 860 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 PCYT1AP49585 367 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 COG7P83436 770 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 CEP19Q96LK0 163 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 SCLT1Q96NL6 688 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 ITM2BQ9Y287 266 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.2□□□□□ -1.58
PTPN13-202ENST00000411767 IFT20Q8IY31 132 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 NEUROG2Q9H2A3 272 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 KLHL31Q9H511 634 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 SAMD15Q9P1V8 674 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 BAG5Q9UL15 447 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TMEM191CA6NGB0 347 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TMEM191BP0C7N4 346 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 RFX1P22670 979 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 IL1RL1Q01638 556 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 RBM26Q5T8P6 1007 aaKnown RBP5.2□□□□□ -1.58
PTPN13-202ENST00000411767 LRCH2Q5VUJ6 765 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 NBPF6Q5VWK0 638 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 CPLX3Q8WVH0 158 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 NBPF4Q96M43 638 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 PPME1Q9Y570 386 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 HSPA8P11142 646 aaKnown RBP5.2□□□□□ -1.58
PTPN13-202ENST00000411767 MSR1P21757 451 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TRIM14Q14142 442 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 KIFC3Q9BVG8 833 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 SEPT3Q9UH03 358 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TSKSQ9UJT2 592 aa5.2□□□□□ -1.58
PTPN13-202ENST00000411767 CDV3Q9UKY7 258 aaKnown RBP5.2□□□□□ -1.58
PTPN13-202ENST00000411767 TEX28O15482 410 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 NUP62P37198 522 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 CWC27Q6UX04 472 aaKnown RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 NAP1L4Q99733 375 aaKnown RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 JRKLQ9Y4A0 524 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 ORC6Q9Y5N6 252 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 A6NNZ2 444 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 POTECB2RU33 542 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 FAM160A1Q05DH4 1040 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 TAF11Q15544 211 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 CNGA2Q16280 664 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 KIAA0753Q2KHM9 967 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 TUBB8Q3ZCM7 444 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 MBD2Q9UBB5 411 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 GOLGA6CA6NDK9 693 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 GOLGA6BA6NDN3 693 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 GOLGA6DP0CG33 693 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 G3BP1Q13283 466 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 INTS8Q75QN2 995 aaKnown RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 CUL5Q93034 780 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 HAUS7Q99871 368 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 EHMT1Q9H9B1 1298 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 GOLGA6AQ9NYA3 693 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 CDC40O60508 579 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 PSMD7P51665 324 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 PPP2R5DQ14738 602 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 TMCO4Q5TGY1 634 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 DENND2CQ68D51 928 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 HDGFL2Q7Z4V5 671 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 LZTFL1Q9NQ48 299 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 HIP1O00291 1037 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 BRD2P25440 801 aaKnown RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 CLNS1AP54105 237 aaKnown RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 BASP1P80723 227 aaKnown RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 CEP70Q8NHQ1 597 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 NRBF2Q96F24 287 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 MIS12Q9H081 205 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 GIGYF1O75420 1035 aaPredicted RBP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 ZNF165P49910 485 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 HLTFQ14527 1009 aaKnown RBP eCLIP5.19□□□□□ -1.58
PTPN13-202ENST00000411767 RASSF5Q8WWW0 418 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 FOXD4L1Q9NU39 408 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 HYOU1Q9Y4L1 999 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 FAM169AQ9Y6X4 670 aa5.19□□□□□ -1.58
PTPN13-202ENST00000411767 GRM1Q13255 1194 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 STXBP4Q6ZWJ1 553 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 MPHOSPH8Q99549 860 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 IARS2Q9NSE4 1012 aaKnown RBP5.18□□□□□ -1.58
PTPN13-202ENST00000411767 GTPBP10A4D1E9 387 aaKnown RBP5.18□□□□□ -1.58
PTPN13-202ENST00000411767 SNTNA6NMZ2 147 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 GEN1Q17RS7 908 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 B4GALNT3Q6L9W6 998 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 HDDC2Q7Z4H3 204 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 ZNF354CQ86Y25 554 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 KLHDC4Q8TBB5 520 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 RILPL2Q969X0 211 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 RCAN3Q9UKA8 241 aa5.18□□□□□ -1.58
PTPN13-202ENST00000411767 SAMD1Q6SPF0 538 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms