RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 ZBTB38Q8NAP3 1195 aaPredicted RBP17.49■□□□□ 0.39
MINDY4-202ENST00000409881 SUCLG2Q96I99 432 aa17.49■□□□□ 0.39
MINDY4-202ENST00000409881 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
MINDY4-202ENST00000409881 MSL1Q68DK7 614 aa17.49■□□□□ 0.39
MINDY4-202ENST00000409881 QSER1Q2KHR3 1735 aa17.48■□□□□ 0.39
MINDY4-202ENST00000409881 CASP7P55210 303 aa17.48■□□□□ 0.39
MINDY4-202ENST00000409881 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
MINDY4-202ENST00000409881 PDGFDQ9GZP0 370 aaPredicted RBP17.48■□□□□ 0.39
MINDY4-202ENST00000409881 NTSR2O95665 410 aa17.48■□□□□ 0.39
MINDY4-202ENST00000409881 NBPF5PQ86XG9 351 aaPredicted RBP17.48■□□□□ 0.39
MINDY4-202ENST00000409881 HDAC5Q9UQL6 1122 aa17.48■□□□□ 0.39
MINDY4-202ENST00000409881 NUTM1Q86Y26 1132 aa17.47■□□□□ 0.39
MINDY4-202ENST00000409881 NLGN1Q8N2Q7 840 aa17.47■□□□□ 0.39
MINDY4-202ENST00000409881 CARMIL3Q8ND23 1372 aa17.47■□□□□ 0.39
MINDY4-202ENST00000409881 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
MINDY4-202ENST00000409881 ISY1Q9ULR0 285 aaKnown RBP17.47■□□□□ 0.39
MINDY4-202ENST00000409881 NPHP1O15259 732 aa17.46■□□□□ 0.39
MINDY4-202ENST00000409881 GTF2E1P29083 439 aaPredicted RBP17.46■□□□□ 0.39
MINDY4-202ENST00000409881 CEP85Q6P2H3 762 aa17.46■□□□□ 0.39
MINDY4-202ENST00000409881 TNPO1Q92973 898 aaKnown RBP17.46■□□□□ 0.39
MINDY4-202ENST00000409881 BICC1Q9H694 974 aaKnown RBP17.46■□□□□ 0.39
MINDY4-202ENST00000409881 R3HDM1Q15032 1099 aaKnown RBP17.46■□□□□ 0.39
MINDY4-202ENST00000409881 KAZALD1Q96I82 304 aa17.46■□□□□ 0.39
MINDY4-202ENST00000409881 IRS4O14654 1257 aaPredicted RBP17.45■□□□□ 0.38
MINDY4-202ENST00000409881 EPHA10Q5JZY3 1008 aa17.45■□□□□ 0.38
MINDY4-202ENST00000409881 NYXQ9GZU5 481 aa17.45■□□□□ 0.38
MINDY4-202ENST00000409881 COL24A1Q17RW2 1714 aa17.45■□□□□ 0.38
MINDY4-202ENST00000409881 TPM2P07951 284 aa17.45■□□□□ 0.38
MINDY4-202ENST00000409881 TM4SF1P30408 202 aa17.45■□□□□ 0.38
MINDY4-202ENST00000409881 DDR1Q08345 913 aa17.45■□□□□ 0.38
MINDY4-202ENST00000409881 CDHR2Q9BYE9 1310 aa17.44■□□□□ 0.38
MINDY4-202ENST00000409881 ERFEQ4G0M1 354 aa17.44■□□□□ 0.38
MINDY4-202ENST00000409881 HCLS1P14317 486 aaPredicted RBP17.44■□□□□ 0.38
MINDY4-202ENST00000409881 DDIT3P35638 169 aa17.44■□□□□ 0.38
MINDY4-202ENST00000409881 TPTE2Q6XPS3 522 aa17.44■□□□□ 0.38
MINDY4-202ENST00000409881 SIRT2Q8IXJ6 389 aa17.44■□□□□ 0.38
MINDY4-202ENST00000409881 RPAP2Q8IXW5 612 aaPredicted RBP17.44■□□□□ 0.38
MINDY4-202ENST00000409881 CCDC24Q8N4L8 307 aa17.44■□□□□ 0.38
MINDY4-202ENST00000409881 ANKRD44Q8N8A2 993 aa17.44■□□□□ 0.38
MINDY4-202ENST00000409881 MMP10P09238 476 aa17.43■□□□□ 0.38
MINDY4-202ENST00000409881 PSDA5PKW4 1024 aaPredicted RBP17.43■□□□□ 0.38
MINDY4-202ENST00000409881 POLRMTO00411 1230 aaKnown RBP17.43■□□□□ 0.38
MINDY4-202ENST00000409881 SERPINB2P05120 415 aa17.43■□□□□ 0.38
MINDY4-202ENST00000409881 KIAA1211Q6ZU35 1233 aa17.43■□□□□ 0.38
MINDY4-202ENST00000409881 CNBD1Q8NA66 436 aa17.43■□□□□ 0.38
MINDY4-202ENST00000409881 CHMP3Q9Y3E7 222 aa17.43■□□□□ 0.38
MINDY4-202ENST00000409881 PNMA6EA0A0J9YXQ4 647 aa17.42■□□□□ 0.38
MINDY4-202ENST00000409881 FOXO4P98177 505 aa17.42■□□□□ 0.38
MINDY4-202ENST00000409881 SRGAP3O43295 1099 aa17.42■□□□□ 0.38
MINDY4-202ENST00000409881 ATP8B2P98198 1209 aa17.42■□□□□ 0.38
MINDY4-202ENST00000409881 LMBR1LQ6UX01 489 aa17.42■□□□□ 0.38
MINDY4-202ENST00000409881 CCDC85AQ96PX6 553 aaPredicted RBP17.42■□□□□ 0.38
MINDY4-202ENST00000409881 ABCC12Q96J65 1359 aa17.42■□□□□ 0.38
MINDY4-202ENST00000409881 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
MINDY4-202ENST00000409881 PDE8AO60658 829 aa17.41■□□□□ 0.38
MINDY4-202ENST00000409881 HMMRO75330 724 aa17.41■□□□□ 0.38
MINDY4-202ENST00000409881 PLA2G12BQ9BX93 195 aa17.41■□□□□ 0.38
MINDY4-202ENST00000409881 PDCL3Q9H2J4 239 aa17.41■□□□□ 0.38
MINDY4-202ENST00000409881 FOXD4L1Q9NU39 408 aa17.41■□□□□ 0.38
MINDY4-202ENST00000409881 ZBTB7AO95365 584 aa17.4■□□□□ 0.38
MINDY4-202ENST00000409881 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
MINDY4-202ENST00000409881 PRR5LQ6MZQ0 368 aa17.4■□□□□ 0.38
MINDY4-202ENST00000409881 SLC16A10Q8TF71 515 aa17.4■□□□□ 0.38
MINDY4-202ENST00000409881 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
MINDY4-202ENST00000409881 HSP90B1P14625 803 aaKnown RBP17.4■□□□□ 0.38
MINDY4-202ENST00000409881 CTSWP56202 376 aa17.4■□□□□ 0.38
MINDY4-202ENST00000409881 RABL6Q3YEC7 729 aaPredicted RBP17.4■□□□□ 0.38
MINDY4-202ENST00000409881 ST5P78524 1137 aa17.39■□□□□ 0.37
MINDY4-202ENST00000409881 MTX1Q13505 466 aa17.39■□□□□ 0.37
MINDY4-202ENST00000409881 DDX60Q8IY21 1712 aaKnown RBP17.39■□□□□ 0.37
MINDY4-202ENST00000409881 SMC5Q8IY18 1101 aa17.38■□□□□ 0.37
MINDY4-202ENST00000409881 RAB3GAP1Q15042 981 aa17.38■□□□□ 0.37
MINDY4-202ENST00000409881 C3orf67Q6ZVT6 689 aa17.38■□□□□ 0.37
MINDY4-202ENST00000409881 TTLL11Q8NHH1 800 aa17.38■□□□□ 0.37
MINDY4-202ENST00000409881 SSH3Q8TE77 659 aa17.38■□□□□ 0.37
MINDY4-202ENST00000409881 CASZ1Q86V15 1759 aa17.37■□□□□ 0.37
MINDY4-202ENST00000409881 POLA2Q14181 598 aa17.37■□□□□ 0.37
MINDY4-202ENST00000409881 SLC10A5Q5PT55 438 aa17.37■□□□□ 0.37
MINDY4-202ENST00000409881 LAMB2P55268 1798 aa17.37■□□□□ 0.37
MINDY4-202ENST00000409881 SKOR2Q2VWA4 1001 aaPredicted RBP17.37■□□□□ 0.37
MINDY4-202ENST00000409881 SNX21Q969T3 373 aa17.37■□□□□ 0.37
MINDY4-202ENST00000409881 ATF5Q9Y2D1 282 aaPredicted RBP17.37■□□□□ 0.37
MINDY4-202ENST00000409881 CSF1RP07333 972 aa17.36■□□□□ 0.37
MINDY4-202ENST00000409881 RBM25P49756 843 aaKnown RBP17.36■□□□□ 0.37
MINDY4-202ENST00000409881 NLRP3Q96P20 1036 aa17.36■□□□□ 0.37
MINDY4-202ENST00000409881 GREM2Q9H772 168 aa17.36■□□□□ 0.37
MINDY4-202ENST00000409881 NASPP49321 788 aaPredicted RBP17.36■□□□□ 0.37
MINDY4-202ENST00000409881 RBM10P98175 930 aaKnown RBP17.36■□□□□ 0.37
MINDY4-202ENST00000409881 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
MINDY4-202ENST00000409881 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
MINDY4-202ENST00000409881 MTFR1LQ9H019 292 aa17.36■□□□□ 0.37
MINDY4-202ENST00000409881 MYH3P11055 1940 aa17.35■□□□□ 0.37
MINDY4-202ENST00000409881 CCDC57Q2TAC2 916 aa17.35■□□□□ 0.37
MINDY4-202ENST00000409881 CCDC152Q4G0S7 254 aa17.35■□□□□ 0.37
MINDY4-202ENST00000409881 CIZ1Q9ULV3 898 aaPredicted RBP17.35■□□□□ 0.37
MINDY4-202ENST00000409881 PA2G4Q9UQ80 394 aaKnown RBP17.35■□□□□ 0.37
MINDY4-202ENST00000409881 ZSCAN30Q86W11 494 aa17.35■□□□□ 0.37
MINDY4-202ENST00000409881 EXOC6BQ9Y2D4 811 aa17.35■□□□□ 0.37
MINDY4-202ENST00000409881 TNRC6CQ9HCJ0 1690 aaKnown RBP17.34■□□□□ 0.37
MINDY4-202ENST00000409881 SURF6O75683 361 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms