RNA–Protein interactions for RNA: ENST00000407704.1

ITSN2-204, Transcript of intersectin 2, humanhuman

TSL 4

Gene ITSN2, Length 597 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-204ENST00000407704 COL4A1P02462 1669 aa26.04■■□□□ 1.76
ITSN2-204ENST00000407704 LMOD1P29536 600 aaPredicted RBP26.04■■□□□ 1.76
ITSN2-204ENST00000407704 EPS15P42566 896 aa26.04■■□□□ 1.76
ITSN2-204ENST00000407704 CNTROBQ8N137 903 aa26.04■■□□□ 1.76
ITSN2-204ENST00000407704 MPNDQ8N594 471 aa26.04■■□□□ 1.76
ITSN2-204ENST00000407704 RTFDC1Q9BY42 306 aaPredicted RBP26.04■■□□□ 1.76
ITSN2-204ENST00000407704 PHAXQ9H814 394 aaKnown RBP26.04■■□□□ 1.76
ITSN2-204ENST00000407704 GNAI1P63096 354 aa26.03■■□□□ 1.76
ITSN2-204ENST00000407704 SUPT20HQ8NEM7 779 aa26.03■■□□□ 1.76
ITSN2-204ENST00000407704 LRRC37AA6NMS7 1700 aa26.02■■□□□ 1.76
ITSN2-204ENST00000407704 TMEM88BA6NKF7 163 aa26.02■■□□□ 1.76
ITSN2-204ENST00000407704 RIC3Q7Z5B4 369 aa26.01■■□□□ 1.75
ITSN2-204ENST00000407704 C8orf58Q8NAV2 365 aa26.01■■□□□ 1.75
ITSN2-204ENST00000407704 DUOX1Q9NRD9 1551 aa26■■□□□ 1.75
ITSN2-204ENST00000407704 CNTNAP1P78357 1384 aa26■■□□□ 1.75
ITSN2-204ENST00000407704 CALD1Q05682 793 aaKnown RBP26■■□□□ 1.75
ITSN2-204ENST00000407704 CXCL9Q07325 125 aa26■■□□□ 1.75
ITSN2-204ENST00000407704 VPS33BQ9H267 617 aa26■■□□□ 1.75
ITSN2-204ENST00000407704 ZNRF3Q9ULT6 936 aa26■■□□□ 1.75
ITSN2-204ENST00000407704 CELF1Q92879 486 aaKnown RBP25.99■■□□□ 1.75
ITSN2-204ENST00000407704 TRPM7Q96QT4 1865 aa25.98■■□□□ 1.75
ITSN2-204ENST00000407704 IRS4O14654 1257 aaPredicted RBP25.97■■□□□ 1.75
ITSN2-204ENST00000407704 FMR1Q06787 632 aaKnown RBP eCLIP25.97■■□□□ 1.75
ITSN2-204ENST00000407704 GOLGA2Q08379 1002 aa25.97■■□□□ 1.75
ITSN2-204ENST00000407704 KIAA2012Q0VF49 1180 aa25.97■■□□□ 1.75
ITSN2-204ENST00000407704 SF3B3Q15393 1217 aaKnown RBP25.97■■□□□ 1.75
ITSN2-204ENST00000407704 RAD17O75943 681 aa25.96■■□□□ 1.75
ITSN2-204ENST00000407704 TRIM28Q13263 835 aaKnown RBP25.96■■□□□ 1.75
ITSN2-204ENST00000407704 TSPYL6Q8N831 410 aa25.96■■□□□ 1.75
ITSN2-204ENST00000407704 MYD88Q99836 296 aa25.96■■□□□ 1.75
ITSN2-204ENST00000407704 GPRC5DQ9NZD1 345 aa25.96■■□□□ 1.75
ITSN2-204ENST00000407704 VEGFBP49765 207 aa25.95■■□□□ 1.74
ITSN2-204ENST00000407704 USP50Q70EL3 339 aaPredicted RBP25.95■■□□□ 1.74
ITSN2-204ENST00000407704 GMPSP49915 693 aaPredicted RBP25.94■■□□□ 1.74
ITSN2-204ENST00000407704 CIAPIN1Q6FI81 312 aa25.94■■□□□ 1.74
ITSN2-204ENST00000407704 TMC4Q7Z404 712 aa25.94■■□□□ 1.74
ITSN2-204ENST00000407704 JARID2Q92833 1246 aaPredicted RBP25.94■■□□□ 1.74
ITSN2-204ENST00000407704 TSR2Q969E8 191 aaKnown RBP25.94■■□□□ 1.74
ITSN2-204ENST00000407704 YDJCA8MPS7 323 aa25.93■■□□□ 1.74
ITSN2-204ENST00000407704 ZBTB38Q8NAP3 1195 aaPredicted RBP25.93■■□□□ 1.74
ITSN2-204ENST00000407704 NSFL1CQ9UNZ2 370 aaKnown RBP25.93■■□□□ 1.74
ITSN2-204ENST00000407704 GPSM2P81274 684 aa25.92■■□□□ 1.74
ITSN2-204ENST00000407704 ADARB2Q9NS39 739 aaKnown RBP25.92■■□□□ 1.74
ITSN2-204ENST00000407704 TRAF5O00463 557 aa25.91■■□□□ 1.74
ITSN2-204ENST00000407704 RIMBP2O15034 1052 aa25.91■■□□□ 1.74
ITSN2-204ENST00000407704 CCDC30Q5VVM6 783 aa25.91■■□□□ 1.74
ITSN2-204ENST00000407704 ABT1Q9ULW3 272 aaKnown RBP25.91■■□□□ 1.74
ITSN2-204ENST00000407704 WASHC4Q2M389 1173 aa25.9■■□□□ 1.74
ITSN2-204ENST00000407704 DEFB115Q30KQ5 88 aa25.9■■□□□ 1.74
ITSN2-204ENST00000407704 TNS4Q8IZW8 715 aa25.9■■□□□ 1.74
ITSN2-204ENST00000407704 BCL2L13Q9BXK5 485 aa25.9■■□□□ 1.74
ITSN2-204ENST00000407704 SEC31BQ9NQW1 1179 aa25.9■■□□□ 1.74
ITSN2-204ENST00000407704 POLLQ9UGP5 575 aa25.9■■□□□ 1.74
ITSN2-204ENST00000407704 SHTN1A0MZ66 631 aa25.89■■□□□ 1.74
ITSN2-204ENST00000407704 C6orf229H3BNL8 230 aa25.89■■□□□ 1.74
ITSN2-204ENST00000407704 RPS8P62241 208 aaKnown RBP25.89■■□□□ 1.74
ITSN2-204ENST00000407704 TNIP1Q15025 636 aa25.89■■□□□ 1.74
ITSN2-204ENST00000407704 GPR101Q96P66 508 aaPredicted RBP25.89■■□□□ 1.74
ITSN2-204ENST00000407704 DBNDD1Q9H9R9 158 aa25.89■■□□□ 1.74
ITSN2-204ENST00000407704 RASSF10A6NK89 507 aa25.88■■□□□ 1.73
ITSN2-204ENST00000407704 CCDC191Q8NCU4 936 aa25.88■■□□□ 1.73
ITSN2-204ENST00000407704 CCDC85AQ96PX6 553 aaPredicted RBP25.88■■□□□ 1.73
ITSN2-204ENST00000407704 METTL22Q9BUU2 404 aaPredicted RBP25.88■■□□□ 1.73
ITSN2-204ENST00000407704 POLR2AP24928 1970 aaKnown RBP25.87■■□□□ 1.73
ITSN2-204ENST00000407704 MYH3P11055 1940 aa25.87■■□□□ 1.73
ITSN2-204ENST00000407704 SPEF2Q9C093 1822 aa25.87■■□□□ 1.73
ITSN2-204ENST00000407704 FOXN1O15353 648 aa25.87■■□□□ 1.73
ITSN2-204ENST00000407704 WWC1Q8IX03 1113 aa25.87■■□□□ 1.73
ITSN2-204ENST00000407704 CWC25Q9NXE8 425 aaPredicted RBP25.87■■□□□ 1.73
ITSN2-204ENST00000407704 MAP3K2Q9Y2U5 619 aa25.87■■□□□ 1.73
ITSN2-204ENST00000407704 ZBTB12Q9Y330 459 aaPredicted RBP25.87■■□□□ 1.73
ITSN2-204ENST00000407704 SCN9AQ15858 1988 aa25.86■■□□□ 1.73
ITSN2-204ENST00000407704 CAPN15O75808 1086 aa25.86■■□□□ 1.73
ITSN2-204ENST00000407704 DDX58O95786 925 aaKnown RBP25.86■■□□□ 1.73
ITSN2-204ENST00000407704 PCCAP05165 728 aaPredicted RBP25.86■■□□□ 1.73
ITSN2-204ENST00000407704 HIRAP54198 1017 aaPredicted RBP25.86■■□□□ 1.73
ITSN2-204ENST00000407704 CST9Q5W186 159 aa25.86■■□□□ 1.73
ITSN2-204ENST00000407704 CNOT7Q9UIV1 285 aaKnown RBP25.86■■□□□ 1.73
ITSN2-204ENST00000407704 DOK7Q18PE1 504 aa25.85■■□□□ 1.73
ITSN2-204ENST00000407704 TBC1D16Q8TBP0 767 aa25.85■■□□□ 1.73
ITSN2-204ENST00000407704 TRPM4Q8TD43 1214 aa25.85■■□□□ 1.73
ITSN2-204ENST00000407704 KCNQ5Q9NR82 932 aa25.85■■□□□ 1.73
ITSN2-204ENST00000407704 PSMD14O00487 310 aa25.84■■□□□ 1.73
ITSN2-204ENST00000407704 PDE8AO60658 829 aa25.84■■□□□ 1.73
ITSN2-204ENST00000407704 CCDC27Q2M243 656 aa25.84■■□□□ 1.73
ITSN2-204ENST00000407704 WDR33Q9C0J8 1336 aaKnown RBP25.84■■□□□ 1.73
ITSN2-204ENST00000407704 PI4KAP2A4QPH2 592 aa25.83■■□□□ 1.73
ITSN2-204ENST00000407704 KSR2Q6VAB6 950 aa25.83■■□□□ 1.73
ITSN2-204ENST00000407704 G2E3Q7L622 706 aa25.83■■□□□ 1.73
ITSN2-204ENST00000407704 MICALL2Q8IY33 904 aa25.83■■□□□ 1.73
ITSN2-204ENST00000407704 PI4KAP1Q8N8J0 262 aa25.83■■□□□ 1.73
ITSN2-204ENST00000407704 GLIS2Q9BZE0 524 aaPredicted RBP25.83■■□□□ 1.73
ITSN2-204ENST00000407704 MRS2Q9HD23 443 aa25.83■■□□□ 1.73
ITSN2-204ENST00000407704 CDHR2Q9BYE9 1310 aa25.83■■□□□ 1.73
ITSN2-204ENST00000407704 ECE2O60344 883 aa25.82■■□□□ 1.72
ITSN2-204ENST00000407704 IGKV5-2P06315 115 aa25.82■■□□□ 1.72
ITSN2-204ENST00000407704 HSP90B1P14625 803 aaKnown RBP25.82■■□□□ 1.72
ITSN2-204ENST00000407704 TWISTNBQ3B726 338 aaPredicted RBP25.82■■□□□ 1.72
ITSN2-204ENST00000407704 CCDC152Q4G0S7 254 aa25.82■■□□□ 1.72
ITSN2-204ENST00000407704 EYA3Q99504 573 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms