RNA–Protein interactions for RNA: ENST00000407684.1

GAREM2-202, Transcript of GRB2 associated regulator of MAPK1 subtype 2, humanhuman

TSL 2 BASIC

Gene GAREM2, Length 5,138 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM2-202ENST00000407684 DNAJC10Q8IXB1 793 aa20.39■□□□□ 0.85
GAREM2-202ENST00000407684 UTP14AQ9BVJ6 771 aaKnown RBP20.39■□□□□ 0.85
GAREM2-202ENST00000407684 A1BGP04217 495 aa20.39■□□□□ 0.85
GAREM2-202ENST00000407684 HMGN5P82970 282 aaKnown RBP20.39■□□□□ 0.85
GAREM2-202ENST00000407684 NBPF5PQ86XG9 351 aaPredicted RBP20.39■□□□□ 0.85
GAREM2-202ENST00000407684 SETDB2Q96T68 719 aa20.39■□□□□ 0.85
GAREM2-202ENST00000407684 CAVIN4Q5BKX8 364 aa20.38■□□□□ 0.85
GAREM2-202ENST00000407684 LRRC7Q96NW7 1537 aa20.38■□□□□ 0.85
GAREM2-202ENST00000407684 CDKL5O76039 1030 aa20.38■□□□□ 0.85
GAREM2-202ENST00000407684 CASTP20810 708 aaKnown RBP20.38■□□□□ 0.85
GAREM2-202ENST00000407684 EVI5LQ96CN4 794 aa20.38■□□□□ 0.85
GAREM2-202ENST00000407684 ACBD3Q9H3P7 528 aa20.38■□□□□ 0.85
GAREM2-202ENST00000407684 IL15P40933 162 aaPredicted RBP20.37■□□□□ 0.85
GAREM2-202ENST00000407684 CCDC191Q8NCU4 936 aa20.37■□□□□ 0.85
GAREM2-202ENST00000407684 UPF3BQ9BZI7 483 aaKnown RBP20.37■□□□□ 0.85
GAREM2-202ENST00000407684 RPGRQ92834 1020 aaKnown RBP20.37■□□□□ 0.85
GAREM2-202ENST00000407684 TBC1D2Q9BYX2 928 aa20.37■□□□□ 0.85
GAREM2-202ENST00000407684 SPATA32Q96LK8 384 aa20.37■□□□□ 0.85
GAREM2-202ENST00000407684 RUFY1Q96T51 708 aa20.37■□□□□ 0.85
GAREM2-202ENST00000407684 THRAP3Q9Y2W1 955 aaKnown RBP20.37■□□□□ 0.85
GAREM2-202ENST00000407684 PDE1AP54750 535 aa20.36■□□□□ 0.85
GAREM2-202ENST00000407684 NAP1L1P55209 391 aaKnown RBP20.36■□□□□ 0.85
GAREM2-202ENST00000407684 NYXQ9GZU5 481 aa20.36■□□□□ 0.85
GAREM2-202ENST00000407684 CCDC87Q9NVE4 849 aa20.36■□□□□ 0.85
GAREM2-202ENST00000407684 DDX46Q7L014 1031 aaKnown RBP20.36■□□□□ 0.85
GAREM2-202ENST00000407684 MPNDQ8N594 471 aa20.36■□□□□ 0.85
GAREM2-202ENST00000407684 LRP2BPQ9P2M1 347 aa20.36■□□□□ 0.85
GAREM2-202ENST00000407684 IDH1O75874 414 aaKnown RBP20.35■□□□□ 0.85
GAREM2-202ENST00000407684 TDO2P48775 406 aa20.35■□□□□ 0.85
GAREM2-202ENST00000407684 ZSCAN30Q86W11 494 aa20.35■□□□□ 0.85
GAREM2-202ENST00000407684 CDK5RAP3Q96JB5 506 aa20.35■□□□□ 0.85
GAREM2-202ENST00000407684 CCNL1Q9UK58 526 aaPredicted RBP20.35■□□□□ 0.85
GAREM2-202ENST00000407684 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
GAREM2-202ENST00000407684 IFT172Q9UG01 1749 aa20.34■□□□□ 0.85
GAREM2-202ENST00000407684 FILIP1LQ4L180 1135 aa20.34■□□□□ 0.85
GAREM2-202ENST00000407684 BICC1Q9H694 974 aaKnown RBP20.34■□□□□ 0.85
GAREM2-202ENST00000407684 RAI14Q9P0K7 980 aa20.34■□□□□ 0.85
GAREM2-202ENST00000407684 CFAP45Q9UL16 551 aa20.34■□□□□ 0.85
GAREM2-202ENST00000407684 TRPC5Q9UL62 973 aaPredicted RBP20.34■□□□□ 0.85
GAREM2-202ENST00000407684 EPS15P42566 896 aa20.34■□□□□ 0.85
GAREM2-202ENST00000407684 PARP10Q53GL7 1025 aa20.34■□□□□ 0.85
GAREM2-202ENST00000407684 STK11IPQ8N1F8 1099 aa20.33■□□□□ 0.85
GAREM2-202ENST00000407684 UBAC1Q9BSL1 405 aa20.33■□□□□ 0.85
GAREM2-202ENST00000407684 CD163L1Q9NR16 1453 aa20.33■□□□□ 0.85
GAREM2-202ENST00000407684 IRS4O14654 1257 aaPredicted RBP20.33■□□□□ 0.85
GAREM2-202ENST00000407684 IMMTQ16891 758 aaKnown RBP20.33■□□□□ 0.85
GAREM2-202ENST00000407684 TBC1D9Q6ZT07 1266 aa20.33■□□□□ 0.85
GAREM2-202ENST00000407684 OFD1O75665 1012 aa20.33■□□□□ 0.84
GAREM2-202ENST00000407684 ST5P78524 1137 aa20.33■□□□□ 0.84
GAREM2-202ENST00000407684 UNC5CLQ8IV45 518 aa20.33■□□□□ 0.84
GAREM2-202ENST00000407684 NLRP3Q96P20 1036 aa20.33■□□□□ 0.84
GAREM2-202ENST00000407684 NUP62CLQ9H1M0 184 aa20.33■□□□□ 0.84
GAREM2-202ENST00000407684 PRPF40BQ6NWY9 871 aaKnown RBP20.32■□□□□ 0.84
GAREM2-202ENST00000407684 KDM2BQ8NHM5 1336 aa20.32■□□□□ 0.84
GAREM2-202ENST00000407684 NOM1Q5C9Z4 860 aaKnown RBP20.32■□□□□ 0.84
GAREM2-202ENST00000407684 NUP133Q8WUM0 1156 aa20.32■□□□□ 0.84
GAREM2-202ENST00000407684 PA2G4Q9UQ80 394 aaKnown RBP20.32■□□□□ 0.84
GAREM2-202ENST00000407684 ANKIB1Q9P2G1 1089 aa20.32■□□□□ 0.84
GAREM2-202ENST00000407684 KDRP35968 1356 aa20.32■□□□□ 0.84
GAREM2-202ENST00000407684 UQCRHLA0A096LP55 91 aa20.32■□□□□ 0.84
GAREM2-202ENST00000407684 UQCRHP07919 91 aa20.32■□□□□ 0.84
GAREM2-202ENST00000407684 GCKRQ14397 625 aa20.32■□□□□ 0.84
GAREM2-202ENST00000407684 AIDAQ96BJ3 306 aa20.32■□□□□ 0.84
GAREM2-202ENST00000407684 TPTE2Q6XPS3 522 aa20.31■□□□□ 0.84
GAREM2-202ENST00000407684 U3KPZ7 1027 aaPredicted RBP20.31■□□□□ 0.84
GAREM2-202ENST00000407684 GNPATO15228 680 aa20.31■□□□□ 0.84
GAREM2-202ENST00000407684 CCP110O43303 1012 aa20.31■□□□□ 0.84
GAREM2-202ENST00000407684 SERPINC1P01008 464 aa20.31■□□□□ 0.84
GAREM2-202ENST00000407684 CCDC83Q8IWF9 413 aa20.31■□□□□ 0.84
GAREM2-202ENST00000407684 CCAR1Q8IX12 1150 aaKnown RBP20.31■□□□□ 0.84
GAREM2-202ENST00000407684 ANKRD18AQ8IVF6 992 aa20.3■□□□□ 0.84
GAREM2-202ENST00000407684 NOL7Q9UMY1 257 aaKnown RBP20.3■□□□□ 0.84
GAREM2-202ENST00000407684 TTC41PQ6P2S7 1318 aa20.3■□□□□ 0.84
GAREM2-202ENST00000407684 SYCE3A1L190 88 aa20.3■□□□□ 0.84
GAREM2-202ENST00000407684 MAP3K12Q12852 859 aa20.3■□□□□ 0.84
GAREM2-202ENST00000407684 TTLL5Q6EMB2 1281 aa20.3■□□□□ 0.84
GAREM2-202ENST00000407684 DHX8Q14562 1220 aaKnown RBP20.3■□□□□ 0.84
GAREM2-202ENST00000407684 ABCF2Q9UG63 623 aa20.3■□□□□ 0.84
GAREM2-202ENST00000407684 CYP27B1O15528 508 aa20.3■□□□□ 0.84
GAREM2-202ENST00000407684 SDSP20132 328 aa20.3■□□□□ 0.84
GAREM2-202ENST00000407684 TTF1Q15361 905 aaPredicted RBP20.3■□□□□ 0.84
GAREM2-202ENST00000407684 UQCRFS1P1P0C7P4 283 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 TSHZ3Q63HK5 1081 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 SOS2Q07890 1332 aaPredicted RBP20.29■□□□□ 0.84
GAREM2-202ENST00000407684 TRAPPC3LQ5T215 181 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 PAF1Q8N7H5 531 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 DDX11Q96FC9 970 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 MAGEC2Q9UBF1 373 aaPredicted RBP20.29■□□□□ 0.84
GAREM2-202ENST00000407684 ATP2B2Q01814 1243 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 ATP2B3Q16720 1220 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 SOGA3Q5TF21 947 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 WASF1Q92558 559 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 SMARCE1Q969G3 411 aa20.29■□□□□ 0.84
GAREM2-202ENST00000407684 MST1RQ04912 1400 aa20.28■□□□□ 0.84
GAREM2-202ENST00000407684 NBPF7P0C2Y1 421 aaPredicted RBP20.28■□□□□ 0.84
GAREM2-202ENST00000407684 FERMT3Q86UX7 667 aa20.28■□□□□ 0.84
GAREM2-202ENST00000407684 DACH1Q9UI36 760 aa20.28■□□□□ 0.84
GAREM2-202ENST00000407684 CCDC66A2RUB6 948 aa20.28■□□□□ 0.84
GAREM2-202ENST00000407684 C16orf71Q8IYS4 520 aaPredicted RBP20.28■□□□□ 0.84
GAREM2-202ENST00000407684 PPP1R1BQ9UD71 204 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms