RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 WWC1Q8IX03 1113 aa18.72■□□□□ 0.59
SMARCE1-204ENST00000400122 MPNDQ8N594 471 aa18.72■□□□□ 0.59
SMARCE1-204ENST00000400122 PPIP5K2O43314 1243 aa18.71■□□□□ 0.59
SMARCE1-204ENST00000400122 POTEIP0CG38 1075 aa18.71■□□□□ 0.59
SMARCE1-204ENST00000400122 POTEJP0CG39 1038 aa18.71■□□□□ 0.59
SMARCE1-204ENST00000400122 HTRA3P83110 453 aa18.71■□□□□ 0.59
SMARCE1-204ENST00000400122 USP50Q70EL3 339 aaPredicted RBP18.71■□□□□ 0.59
SMARCE1-204ENST00000400122 RIC3Q7Z5B4 369 aa18.71■□□□□ 0.59
SMARCE1-204ENST00000400122 TAF1P21675 1872 aa18.71■□□□□ 0.59
SMARCE1-204ENST00000400122 LMOD1P29536 600 aaPredicted RBP18.7■□□□□ 0.58
SMARCE1-204ENST00000400122 SCNN1DP51172 638 aa18.7■□□□□ 0.58
SMARCE1-204ENST00000400122 C8orf58Q8NAV2 365 aa18.7■□□□□ 0.58
SMARCE1-204ENST00000400122 FAM89AQ96GI7 184 aa18.7■□□□□ 0.58
SMARCE1-204ENST00000400122 LTBP1Q14766 1721 aa18.69■□□□□ 0.58
SMARCE1-204ENST00000400122 ZNF316A6NFI3 1004 aaPredicted RBP18.69■□□□□ 0.58
SMARCE1-204ENST00000400122 IRS4O14654 1257 aaPredicted RBP18.69■□□□□ 0.58
SMARCE1-204ENST00000400122 PCCAP05165 728 aaPredicted RBP18.69■□□□□ 0.58
SMARCE1-204ENST00000400122 METTL22Q9BUU2 404 aaPredicted RBP18.69■□□□□ 0.58
SMARCE1-204ENST00000400122 DUOX1Q9NRD9 1551 aa18.68■□□□□ 0.58
SMARCE1-204ENST00000400122 ATP5J2-PTCD1G3V325 749 aa18.68■□□□□ 0.58
SMARCE1-204ENST00000400122 AOC3Q16853 763 aa18.68■□□□□ 0.58
SMARCE1-204ENST00000400122 PHAXQ9H814 394 aaKnown RBP18.68■□□□□ 0.58
SMARCE1-204ENST00000400122 TMEM88BA6NKF7 163 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 ANP32CO43423 234 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 TNIP1Q15025 636 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 CCDC184Q52MB2 194 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 KSR2Q6VAB6 950 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 WDR63Q8IWG1 891 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 CNTROBQ8N137 903 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 CWC25Q9NXE8 425 aaPredicted RBP18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 PODXL2Q9NZ53 605 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 GPRC5DQ9NZD1 345 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 CNTNAP1P78357 1384 aa18.67■□□□□ 0.58
SMARCE1-204ENST00000400122 MYH3P11055 1940 aa18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 RPS8P62241 208 aaKnown RBP18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 CXCL9Q07325 125 aa18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 EAPPQ56P03 285 aaPredicted RBP18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 ZC3H15Q8WU90 426 aaKnown RBP18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 STK31Q9BXU1 1019 aa18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 ADARB2Q9NS39 739 aaKnown RBP18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 TRPM7Q96QT4 1865 aa18.66■□□□□ 0.58
SMARCE1-204ENST00000400122 ELL2O00472 640 aaPredicted RBP18.65■□□□□ 0.58
SMARCE1-204ENST00000400122 PDE8AO60658 829 aa18.65■□□□□ 0.58
SMARCE1-204ENST00000400122 CIAPIN1Q6FI81 312 aa18.65■□□□□ 0.58
SMARCE1-204ENST00000400122 GJA3Q9Y6H8 435 aa18.65■□□□□ 0.58
SMARCE1-204ENST00000400122 TCERG1O14776 1098 aaKnown RBP18.64■□□□□ 0.57
SMARCE1-204ENST00000400122 CCDC152Q4G0S7 254 aa18.64■□□□□ 0.57
SMARCE1-204ENST00000400122 TSPYL6Q8N831 410 aa18.64■□□□□ 0.57
SMARCE1-204ENST00000400122 DPF2Q92785 391 aa18.64■□□□□ 0.57
SMARCE1-204ENST00000400122 CELF1Q92879 486 aaKnown RBP18.64■□□□□ 0.57
SMARCE1-204ENST00000400122 MRS2Q9HD23 443 aa18.64■□□□□ 0.57
SMARCE1-204ENST00000400122 RTL9Q8NET4 1388 aa18.64■□□□□ 0.57
SMARCE1-204ENST00000400122 ZNF609O15014 1411 aa18.64■□□□□ 0.57
SMARCE1-204ENST00000400122 RASSF10A6NK89 507 aa18.63■□□□□ 0.57
SMARCE1-204ENST00000400122 EPS15P42566 896 aa18.63■□□□□ 0.57
SMARCE1-204ENST00000400122 WASHC4Q2M389 1173 aa18.63■□□□□ 0.57
SMARCE1-204ENST00000400122 TWISTNBQ3B726 338 aaPredicted RBP18.63■□□□□ 0.57
SMARCE1-204ENST00000400122 EYA3Q99504 573 aa18.63■□□□□ 0.57
SMARCE1-204ENST00000400122 MYD88Q99836 296 aa18.63■□□□□ 0.57
SMARCE1-204ENST00000400122 CLEC11AQ9Y240 323 aa18.63■□□□□ 0.57
SMARCE1-204ENST00000400122 NEXNQ0ZGT2 675 aa18.62■□□□□ 0.57
SMARCE1-204ENST00000400122 PI4KAP2A4QPH2 592 aa18.61■□□□□ 0.57
SMARCE1-204ENST00000400122 RPS12P25398 132 aaKnown RBP18.61■□□□□ 0.57
SMARCE1-204ENST00000400122 SLC51AQ86UW1 340 aa18.61■□□□□ 0.57
SMARCE1-204ENST00000400122 PI4KAP1Q8N8J0 262 aa18.61■□□□□ 0.57
SMARCE1-204ENST00000400122 NSFL1CQ9UNZ2 370 aaKnown RBP18.61■□□□□ 0.57
SMARCE1-204ENST00000400122 MAP3K2Q9Y2U5 619 aa18.61■□□□□ 0.57
SMARCE1-204ENST00000400122 IGKV5-2P06315 115 aa18.6■□□□□ 0.57
SMARCE1-204ENST00000400122 MAP1SQ66K74 1059 aaPredicted RBP18.6■□□□□ 0.57
SMARCE1-204ENST00000400122 TSR2Q969E8 191 aaKnown RBP18.6■□□□□ 0.57
SMARCE1-204ENST00000400122 PSME4Q14997 1843 aa18.6■□□□□ 0.57
SMARCE1-204ENST00000400122 YDJCA8MPS7 323 aa18.59■□□□□ 0.57
SMARCE1-204ENST00000400122 GMPSP49915 693 aaPredicted RBP18.59■□□□□ 0.57
SMARCE1-204ENST00000400122 TBC1D16Q8TBP0 767 aa18.59■□□□□ 0.57
SMARCE1-204ENST00000400122 PLA2G12BQ9BX93 195 aa18.59■□□□□ 0.57
SMARCE1-204ENST00000400122 POLLQ9UGP5 575 aa18.59■□□□□ 0.57
SMARCE1-204ENST00000400122 SLC4A2P04920 1241 aa18.58■□□□□ 0.56
SMARCE1-204ENST00000400122 HSPA1AP0DMV8 641 aaKnown RBP18.58■□□□□ 0.56
SMARCE1-204ENST00000400122 HSPA1BP0DMV9 641 aaKnown RBP18.58■□□□□ 0.56
SMARCE1-204ENST00000400122 GPSM2P81274 684 aa18.58■□□□□ 0.56
SMARCE1-204ENST00000400122 CDC5LQ99459 802 aaKnown RBP18.58■□□□□ 0.56
SMARCE1-204ENST00000400122 FANCIQ9NVI1 1328 aa18.57■□□□□ 0.56
SMARCE1-204ENST00000400122 NEURL1BA8MQ27 555 aa18.57■□□□□ 0.56
SMARCE1-204ENST00000400122 H7C1W4 665 aa18.57■□□□□ 0.56
SMARCE1-204ENST00000400122 CTSWP56202 376 aa18.57■□□□□ 0.56
SMARCE1-204ENST00000400122 HHIPL1Q96JK4 782 aa18.57■□□□□ 0.56
SMARCE1-204ENST00000400122 COL4A1P02462 1669 aa18.57■□□□□ 0.56
SMARCE1-204ENST00000400122 XDHP47989 1333 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 C6orf229H3BNL8 230 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 H7C1D1 291 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 VAMP4O75379 141 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 FLIIQ13045 1269 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 DEFB115Q30KQ5 88 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 ANKRD18AQ8IVF6 992 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 LINS1Q8NG48 757 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 TTLL11Q8NHH1 800 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 BCL2L13Q9BXK5 485 aa18.56■□□□□ 0.56
SMARCE1-204ENST00000400122 ZC3H12CQ9C0D7 883 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms