RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
SMAD9-203ENST00000399275 ZNF608Q9ULD9 1512 aaPredicted RBP10.96□□□□□ -0.65
SMAD9-203ENST00000399275 LRRD1A4D1F6 860 aa10.96□□□□□ -0.65
SMAD9-203ENST00000399275 NDUFAB1O14561 156 aa10.96□□□□□ -0.65
SMAD9-203ENST00000399275 E2F4Q16254 413 aa10.96□□□□□ -0.65
SMAD9-203ENST00000399275 SULT6B1Q6IMI4 303 aa10.96□□□□□ -0.65
SMAD9-203ENST00000399275 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.65
SMAD9-203ENST00000399275 CCDC12Q8WUD4 166 aaPredicted RBP10.96□□□□□ -0.65
SMAD9-203ENST00000399275 RBM42Q9BTD8 480 aaKnown RBP10.96□□□□□ -0.65
SMAD9-203ENST00000399275 FAF1Q9UNN5 650 aaPredicted RBP10.96□□□□□ -0.65
SMAD9-203ENST00000399275 SRGAP3O43295 1099 aa10.96□□□□□ -0.66
SMAD9-203ENST00000399275 RIC3Q7Z5B4 369 aa10.96□□□□□ -0.66
SMAD9-203ENST00000399275 FERMT3Q86UX7 667 aa10.96□□□□□ -0.66
SMAD9-203ENST00000399275 MYCNP04198 464 aaPredicted RBP10.96□□□□□ -0.66
SMAD9-203ENST00000399275 PRPF40BQ6NWY9 871 aaKnown RBP10.96□□□□□ -0.66
SMAD9-203ENST00000399275 CCDC186Q7Z3E2 898 aa10.96□□□□□ -0.66
SMAD9-203ENST00000399275 STMN2Q93045 179 aa10.96□□□□□ -0.66
SMAD9-203ENST00000399275 ABTB1Q969K4 478 aaPredicted RBP10.96□□□□□ -0.66
SMAD9-203ENST00000399275 PUS7Q96PZ0 661 aaKnown RBP10.96□□□□□ -0.66
SMAD9-203ENST00000399275 CABP1Q9NZU7 370 aa10.96□□□□□ -0.66
SMAD9-203ENST00000399275 GCC2Q8IWJ2 1684 aa10.96□□□□□ -0.66
SMAD9-203ENST00000399275 STMN1P16949 149 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 RANBP1P43487 201 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 HDGFL1Q5TGJ6 251 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 SMC6Q96SB8 1091 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 IL1RAPL2Q9NP60 686 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 ANKRD36BQ8N2N9 1353 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 ERCC3P19447 782 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 TTC5Q8N0Z6 440 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 AFAP1Q8N556 730 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 SLC24A3Q9HC58 644 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 GPATCH8Q9UKJ3 1502 aaKnown RBP10.95□□□□□ -0.66
SMAD9-203ENST00000399275 SLC8A1P32418 973 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 COG7P83436 770 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 NBPF6Q5VWK0 638 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 NBPF5PQ86XG9 351 aaPredicted RBP10.95□□□□□ -0.66
SMAD9-203ENST00000399275 ZNF513Q8N8E2 541 aaPredicted RBP10.95□□□□□ -0.66
SMAD9-203ENST00000399275 KLHDC4Q8TBB5 520 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 NBPF4Q96M43 638 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.95□□□□□ -0.66
SMAD9-203ENST00000399275 GRIN2AQ12879 1464 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 CTAGE15A4D2H0 777 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 CTAGE8P0CG41 777 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 SPA17Q15506 151 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 CTAGE4Q8IX94 777 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 CCDC65Q8IXS2 484 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 VCX3AQ9NNX9 186 aa10.95□□□□□ -0.66
SMAD9-203ENST00000399275 ZNF330Q9Y3S2 320 aaPredicted RBP10.95□□□□□ -0.66
SMAD9-203ENST00000399275 GSTTP1A0A1W2PQM5 241 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 LUC7L3O95232 432 aaKnown RBP10.94□□□□□ -0.66
SMAD9-203ENST00000399275 MAP3K9P80192 1104 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 SATB1Q01826 763 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 WASHC4Q2M389 1173 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 HDXQ7Z353 690 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 AFAP1L1Q8TED9 768 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 CNPY2Q9Y2B0 182 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 PZPP20742 1482 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 NUTM2FA1L443 756 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 VPS41P49754 854 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 RASIP1Q5U651 963 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 GOLGA1Q92805 767 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 USP26Q9BXU7 913 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 DNAJC8O75937 253 aaPredicted RBP10.94□□□□□ -0.66
SMAD9-203ENST00000399275 CDKL5O76039 1030 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 F13A1P00488 732 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 TUBB4BP68371 445 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 FAM160A1Q05DH4 1040 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 AACSQ86V21 672 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 NEUROD6Q96NK8 337 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 SAMD15Q9P1V8 674 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 BAIAP2L1Q9UHR4 511 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 DNAI1Q9UI46 699 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 MAP3K7CLP57077 242 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 ZC3H6P61129 1189 aaKnown RBP10.94□□□□□ -0.66
SMAD9-203ENST00000399275 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.94□□□□□ -0.66
SMAD9-203ENST00000399275 PNMA8AQ86V59 439 aaPredicted RBP10.94□□□□□ -0.66
SMAD9-203ENST00000399275 ANKRD44Q8N8A2 993 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 SH3GL3Q99963 347 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 ODF2LQ9ULJ1 636 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 A6NNZ2 444 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 CREB3O43889 395 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 SKILP12757 684 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 TUBB8Q3ZCM7 444 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 CTCFLQ8NI51 663 aaPredicted RBP10.94□□□□□ -0.66
SMAD9-203ENST00000399275 USH1CQ9Y6N9 552 aa10.94□□□□□ -0.66
SMAD9-203ENST00000399275 DNMT1P26358 1616 aaKnown RBP10.93□□□□□ -0.66
SMAD9-203ENST00000399275 SREK1Q8WXA9 508 aaKnown RBP10.93□□□□□ -0.66
SMAD9-203ENST00000399275 LMBRD1Q9NUN5 540 aa10.93□□□□□ -0.66
SMAD9-203ENST00000399275 IBTKQ9P2D0 1353 aaPredicted RBP10.93□□□□□ -0.66
SMAD9-203ENST00000399275 TUBBP07437 444 aa10.93□□□□□ -0.66
SMAD9-203ENST00000399275 ERO1AQ96HE7 468 aa10.93□□□□□ -0.66
SMAD9-203ENST00000399275 TTC14Q96N46 770 aa10.93□□□□□ -0.66
SMAD9-203ENST00000399275 ZSCAN16Q9H4T2 348 aaPredicted RBP10.93□□□□□ -0.66
SMAD9-203ENST00000399275 CAPN7Q9Y6W3 813 aa10.93□□□□□ -0.66
SMAD9-203ENST00000399275 SART3Q15020 963 aaKnown RBP10.93□□□□□ -0.66
SMAD9-203ENST00000399275 ANO6Q4KMQ2 910 aa10.93□□□□□ -0.66
SMAD9-203ENST00000399275 TRIM6Q9C030 488 aaPredicted RBP10.93□□□□□ -0.66
SMAD9-203ENST00000399275 ANTXR1Q9H6X2 564 aa10.93□□□□□ -0.66
SMAD9-203ENST00000399275 MRPL50Q8N5N7 158 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms