RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 USP50Q70EL3 339 aaPredicted RBP14.47□□□□□ -0.09
SRMP1-201ENST00000398959 PLBD2Q8NHP8 589 aa14.47□□□□□ -0.09
SRMP1-201ENST00000398959 GRAPLQ8TC17 118 aaPredicted RBP14.47□□□□□ -0.09
SRMP1-201ENST00000398959 AIDAQ96BJ3 306 aa14.47□□□□□ -0.09
SRMP1-201ENST00000398959 RTFDC1Q9BY42 306 aaPredicted RBP14.47□□□□□ -0.09
SRMP1-201ENST00000398959 DBF4Q9UBU7 674 aaPredicted RBP14.47□□□□□ -0.09
SRMP1-201ENST00000398959 ZNRF3Q9ULT6 936 aa14.47□□□□□ -0.09
SRMP1-201ENST00000398959 ABT1Q9ULW3 272 aaKnown RBP14.47□□□□□ -0.09
SRMP1-201ENST00000398959 DUOX1Q9NRD9 1551 aa14.47□□□□□ -0.09
SRMP1-201ENST00000398959 CFAP44Q96MT7 982 aa14.46□□□□□ -0.09
SRMP1-201ENST00000398959 THSD7BQ9C0I4 1608 aa14.45□□□□□ -0.1
SRMP1-201ENST00000398959 RASSF10A6NK89 507 aa14.45□□□□□ -0.1
SRMP1-201ENST00000398959 FOXN1O15353 648 aa14.45□□□□□ -0.1
SRMP1-201ENST00000398959 CXCL9Q07325 125 aa14.45□□□□□ -0.1
SRMP1-201ENST00000398959 DUSP27Q5VZP5 1158 aa14.45□□□□□ -0.1
SRMP1-201ENST00000398959 TMC4Q7Z404 712 aa14.45□□□□□ -0.1
SRMP1-201ENST00000398959 ADARB2Q9NS39 739 aaKnown RBP14.45□□□□□ -0.1
SRMP1-201ENST00000398959 HYPKQ9NX55 129 aa14.45□□□□□ -0.1
SRMP1-201ENST00000398959 GPRC5DQ9NZD1 345 aa14.45□□□□□ -0.1
SRMP1-201ENST00000398959 PSME4Q14997 1843 aa14.44□□□□□ -0.1
SRMP1-201ENST00000398959 ATP5J2-PTCD1G3V325 749 aa14.44□□□□□ -0.1
SRMP1-201ENST00000398959 KIAA2012Q0VF49 1180 aa14.44□□□□□ -0.1
SRMP1-201ENST00000398959 CIAPIN1Q6FI81 312 aa14.44□□□□□ -0.1
SRMP1-201ENST00000398959 FAM89AQ96GI7 184 aa14.44□□□□□ -0.1
SRMP1-201ENST00000398959 BCL2L13Q9BXK5 485 aa14.44□□□□□ -0.1
SRMP1-201ENST00000398959 PRKRIP1Q9H875 184 aaPredicted RBP14.44□□□□□ -0.1
SRMP1-201ENST00000398959 MBIPQ9NS73 344 aa14.44□□□□□ -0.1
SRMP1-201ENST00000398959 CACNA1FO60840 1977 aa14.43□□□□□ -0.1
SRMP1-201ENST00000398959 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
SRMP1-201ENST00000398959 COL4A1P02462 1669 aa14.43□□□□□ -0.1
SRMP1-201ENST00000398959 RAD17O75943 681 aa14.43□□□□□ -0.1
SRMP1-201ENST00000398959 CTCFP49711 727 aaPredicted RBP14.43□□□□□ -0.1
SRMP1-201ENST00000398959 GMPSP49915 693 aaPredicted RBP14.43□□□□□ -0.1
SRMP1-201ENST00000398959 TNIP1Q15025 636 aa14.43□□□□□ -0.1
SRMP1-201ENST00000398959 RTL5Q5HYW3 569 aaPredicted RBP14.43□□□□□ -0.1
SRMP1-201ENST00000398959 PAXIP1Q6ZW49 1069 aaPredicted RBP14.43□□□□□ -0.1
SRMP1-201ENST00000398959 ISCA1Q9BUE6 129 aa14.43□□□□□ -0.1
SRMP1-201ENST00000398959 CDHR2Q9BYE9 1310 aa14.42□□□□□ -0.1
SRMP1-201ENST00000398959 SCN9AQ15858 1988 aa14.42□□□□□ -0.1
SRMP1-201ENST00000398959 CALD1Q05682 793 aaKnown RBP14.42□□□□□ -0.1
SRMP1-201ENST00000398959 FMR1Q06787 632 aaKnown RBP eCLIP14.42□□□□□ -0.1
SRMP1-201ENST00000398959 RIC3Q7Z5B4 369 aa14.42□□□□□ -0.1
SRMP1-201ENST00000398959 TRAF5O00463 557 aa14.41□□□□□ -0.1
SRMP1-201ENST00000398959 APAF1O14727 1248 aa14.41□□□□□ -0.1
SRMP1-201ENST00000398959 GNAI1P63096 354 aa14.41□□□□□ -0.1
SRMP1-201ENST00000398959 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
SRMP1-201ENST00000398959 SF3B3Q15393 1217 aaKnown RBP14.41□□□□□ -0.1
SRMP1-201ENST00000398959 CELF1Q92879 486 aaKnown RBP14.41□□□□□ -0.1
SRMP1-201ENST00000398959 PRDM10Q9NQV6 1147 aa14.41□□□□□ -0.1
SRMP1-201ENST00000398959 IFT57Q9NWB7 429 aa14.41□□□□□ -0.1
SRMP1-201ENST00000398959 WBP1LQ9NX94 342 aa14.41□□□□□ -0.1
SRMP1-201ENST00000398959 NSFL1CQ9UNZ2 370 aaKnown RBP14.41□□□□□ -0.1
SRMP1-201ENST00000398959 ELL2O00472 640 aaPredicted RBP14.4□□□□□ -0.1
SRMP1-201ENST00000398959 IRS4O14654 1257 aaPredicted RBP14.4□□□□□ -0.1
SRMP1-201ENST00000398959 ZNF853P0CG23 659 aa14.4□□□□□ -0.1
SRMP1-201ENST00000398959 ECE1P42892 770 aa14.4□□□□□ -0.1
SRMP1-201ENST00000398959 MAP2K1Q02750 393 aaPredicted RBP14.4□□□□□ -0.1
SRMP1-201ENST00000398959 GRM1Q13255 1194 aa14.4□□□□□ -0.1
SRMP1-201ENST00000398959 WASHC4Q2M389 1173 aa14.4□□□□□ -0.1
SRMP1-201ENST00000398959 YDJCA8MPS7 323 aa14.39□□□□□ -0.11
SRMP1-201ENST00000398959 C6orf229H3BNL8 230 aa14.39□□□□□ -0.11
SRMP1-201ENST00000398959 RIMBP2O15034 1052 aa14.39□□□□□ -0.11
SRMP1-201ENST00000398959 TRIM28Q13263 835 aaKnown RBP14.39□□□□□ -0.11
SRMP1-201ENST00000398959 CST9Q5W186 159 aa14.39□□□□□ -0.11
SRMP1-201ENST00000398959 CAPNS2Q96L46 248 aa14.39□□□□□ -0.11
SRMP1-201ENST00000398959 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
SRMP1-201ENST00000398959 H7C1D1 291 aa14.38□□□□□ -0.11
SRMP1-201ENST00000398959 HSP90B1P14625 803 aaKnown RBP14.38□□□□□ -0.11
SRMP1-201ENST00000398959 LBX1P52954 281 aa14.38□□□□□ -0.11
SRMP1-201ENST00000398959 CYP4F22Q6NT55 531 aa14.38□□□□□ -0.11
SRMP1-201ENST00000398959 ZBTB38Q8NAP3 1195 aaPredicted RBP14.38□□□□□ -0.11
SRMP1-201ENST00000398959 EYA3Q99504 573 aa14.38□□□□□ -0.11
SRMP1-201ENST00000398959 MYD88Q99836 296 aa14.38□□□□□ -0.11
SRMP1-201ENST00000398959 GLIS2Q9BZE0 524 aaPredicted RBP14.38□□□□□ -0.11
SRMP1-201ENST00000398959 DBNDD1Q9H9R9 158 aa14.38□□□□□ -0.11
SRMP1-201ENST00000398959 CNOT7Q9UIV1 285 aaKnown RBP14.38□□□□□ -0.11
SRMP1-201ENST00000398959 TLL2Q9Y6L7 1015 aa14.38□□□□□ -0.11
SRMP1-201ENST00000398959 AKAP11Q9UKA4 1901 aa14.38□□□□□ -0.11
SRMP1-201ENST00000398959 CASP8AP2Q9UKL3 1982 aa14.37□□□□□ -0.11
SRMP1-201ENST00000398959 CELF2O95319 508 aaKnown RBP14.37□□□□□ -0.11
SRMP1-201ENST00000398959 RPS8P62241 208 aaKnown RBP14.37□□□□□ -0.11
SRMP1-201ENST00000398959 GPSM2P81274 684 aa14.37□□□□□ -0.11
SRMP1-201ENST00000398959 MICALL2Q8IY33 904 aa14.37□□□□□ -0.11
SRMP1-201ENST00000398959 TRPM4Q8TD43 1214 aa14.37□□□□□ -0.11
SRMP1-201ENST00000398959 ZC3H15Q8WU90 426 aaKnown RBP14.37□□□□□ -0.11
SRMP1-201ENST00000398959 GPR101Q96P66 508 aaPredicted RBP14.37□□□□□ -0.11
SRMP1-201ENST00000398959 BEGAINQ9BUH8 593 aa14.37□□□□□ -0.11
SRMP1-201ENST00000398959 POLLQ9UGP5 575 aa14.37□□□□□ -0.11
SRMP1-201ENST00000398959 SHTN1A0MZ66 631 aa14.36□□□□□ -0.11
SRMP1-201ENST00000398959 PSMD14O00487 310 aa14.36□□□□□ -0.11
SRMP1-201ENST00000398959 ECE2O60344 883 aa14.36□□□□□ -0.11
SRMP1-201ENST00000398959 DDX58O95786 925 aaKnown RBP14.36□□□□□ -0.11
SRMP1-201ENST00000398959 HIRAP54198 1017 aaPredicted RBP14.36□□□□□ -0.11
SRMP1-201ENST00000398959 C8orf58Q8NAV2 365 aa14.36□□□□□ -0.11
SRMP1-201ENST00000398959 CHMP4AQ9BY43 222 aa14.36□□□□□ -0.11
SRMP1-201ENST00000398959 ZNF408Q9H9D4 720 aa14.36□□□□□ -0.11
SRMP1-201ENST00000398959 PGAP2Q9UHJ9 254 aa14.36□□□□□ -0.11
SRMP1-201ENST00000398959 ZBTB12Q9Y330 459 aaPredicted RBP14.36□□□□□ -0.11
SRMP1-201ENST00000398959 HSPA8P11142 646 aaKnown RBP14.35□□□□□ -0.11
SRMP1-201ENST00000398959 DOK7Q18PE1 504 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms