RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 PCNTO95613 3336 aa18.52■□□□□ 0.56
SNRNP25-203ENST00000397876 ZNF853P0CG23 659 aa18.52■□□□□ 0.56
SNRNP25-203ENST00000397876 GNAI1P63096 354 aa18.52■□□□□ 0.56
SNRNP25-203ENST00000397876 ISCA1Q9BUE6 129 aa18.52■□□□□ 0.56
SNRNP25-203ENST00000397876 ZNRF3Q9ULT6 936 aa18.52■□□□□ 0.56
SNRNP25-203ENST00000397876 ATP5J2-PTCD1G3V325 749 aa18.51■□□□□ 0.55
SNRNP25-203ENST00000397876 EPS15P42566 896 aa18.51■□□□□ 0.55
SNRNP25-203ENST00000397876 GOLGA2Q08379 1002 aa18.51■□□□□ 0.55
SNRNP25-203ENST00000397876 ZNF428Q96B54 188 aa18.51■□□□□ 0.55
SNRNP25-203ENST00000397876 LRRC37AA6NMS7 1700 aa18.51■□□□□ 0.55
SNRNP25-203ENST00000397876 KIAA2012Q0VF49 1180 aa18.5■□□□□ 0.55
SNRNP25-203ENST00000397876 USP50Q70EL3 339 aaPredicted RBP18.5■□□□□ 0.55
SNRNP25-203ENST00000397876 FAM89AQ96GI7 184 aa18.5■□□□□ 0.55
SNRNP25-203ENST00000397876 RIC3Q7Z5B4 369 aa18.49■□□□□ 0.55
SNRNP25-203ENST00000397876 TNS4Q8IZW8 715 aa18.49■□□□□ 0.55
SNRNP25-203ENST00000397876 TAF1P21675 1872 aa18.48■□□□□ 0.55
SNRNP25-203ENST00000397876 DUOX1Q9NRD9 1551 aa18.48■□□□□ 0.55
SNRNP25-203ENST00000397876 CXCL9Q07325 125 aa18.48■□□□□ 0.55
SNRNP25-203ENST00000397876 TRIM28Q13263 835 aaKnown RBP18.48■□□□□ 0.55
SNRNP25-203ENST00000397876 SF3B3Q15393 1217 aaKnown RBP18.48■□□□□ 0.55
SNRNP25-203ENST00000397876 ADARB2Q9NS39 739 aaKnown RBP18.48■□□□□ 0.55
SNRNP25-203ENST00000397876 GPRC5DQ9NZD1 345 aa18.48■□□□□ 0.55
SNRNP25-203ENST00000397876 CDHR2Q9BYE9 1310 aa18.48■□□□□ 0.55
SNRNP25-203ENST00000397876 ELL2O00472 640 aaPredicted RBP18.47■□□□□ 0.55
SNRNP25-203ENST00000397876 RTL5Q5HYW3 569 aaPredicted RBP18.47■□□□□ 0.55
SNRNP25-203ENST00000397876 CIAPIN1Q6FI81 312 aa18.47■□□□□ 0.55
SNRNP25-203ENST00000397876 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
SNRNP25-203ENST00000397876 IRS4O14654 1257 aaPredicted RBP18.46■□□□□ 0.55
SNRNP25-203ENST00000397876 VEGFBP49765 207 aa18.46■□□□□ 0.55
SNRNP25-203ENST00000397876 GMPSP49915 693 aaPredicted RBP18.46■□□□□ 0.55
SNRNP25-203ENST00000397876 TNIP1Q15025 636 aa18.46■□□□□ 0.55
SNRNP25-203ENST00000397876 PHAXQ9H814 394 aaKnown RBP18.46■□□□□ 0.55
SNRNP25-203ENST00000397876 ABT1Q9ULW3 272 aaKnown RBP18.46■□□□□ 0.55
SNRNP25-203ENST00000397876 RASSF10A6NK89 507 aa18.45■□□□□ 0.54
SNRNP25-203ENST00000397876 HSP90B1P14625 803 aaKnown RBP18.45■□□□□ 0.54
SNRNP25-203ENST00000397876 DEFB115Q30KQ5 88 aa18.45■□□□□ 0.54
SNRNP25-203ENST00000397876 CELF1Q92879 486 aaKnown RBP18.45■□□□□ 0.54
SNRNP25-203ENST00000397876 BCL2L13Q9BXK5 485 aa18.45■□□□□ 0.54
SNRNP25-203ENST00000397876 RAD17O75943 681 aa18.44■□□□□ 0.54
SNRNP25-203ENST00000397876 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
SNRNP25-203ENST00000397876 ZBTB38Q8NAP3 1195 aaPredicted RBP18.44■□□□□ 0.54
SNRNP25-203ENST00000397876 AIDAQ96BJ3 306 aa18.44■□□□□ 0.54
SNRNP25-203ENST00000397876 MYD88Q99836 296 aa18.44■□□□□ 0.54
SNRNP25-203ENST00000397876 NSFL1CQ9UNZ2 370 aaKnown RBP18.44■□□□□ 0.54
SNRNP25-203ENST00000397876 DDX58O95786 925 aaKnown RBP18.43■□□□□ 0.54
SNRNP25-203ENST00000397876 WASHC4Q2M389 1173 aa18.43■□□□□ 0.54
SNRNP25-203ENST00000397876 C8orf58Q8NAV2 365 aa18.43■□□□□ 0.54
SNRNP25-203ENST00000397876 FOXN1O15353 648 aa18.42■□□□□ 0.54
SNRNP25-203ENST00000397876 CCDC191Q8NCU4 936 aa18.42■□□□□ 0.54
SNRNP25-203ENST00000397876 TRPM7Q96QT4 1865 aa18.41■□□□□ 0.54
SNRNP25-203ENST00000397876 COL4A1P02462 1669 aa18.41■□□□□ 0.54
SNRNP25-203ENST00000397876 YDJCA8MPS7 323 aa18.41■□□□□ 0.54
SNRNP25-203ENST00000397876 C6orf229H3BNL8 230 aa18.41■□□□□ 0.54
SNRNP25-203ENST00000397876 TRAF5O00463 557 aa18.41■□□□□ 0.54
SNRNP25-203ENST00000397876 GPSM2P81274 684 aa18.41■□□□□ 0.54
SNRNP25-203ENST00000397876 EYA3Q99504 573 aa18.41■□□□□ 0.54
SNRNP25-203ENST00000397876 CWC25Q9NXE8 425 aaPredicted RBP18.41■□□□□ 0.54
SNRNP25-203ENST00000397876 CAPN15O75808 1086 aa18.4■□□□□ 0.54
SNRNP25-203ENST00000397876 PCCAP05165 728 aaPredicted RBP18.4■□□□□ 0.54
SNRNP25-203ENST00000397876 RPS8P62241 208 aaKnown RBP18.4■□□□□ 0.54
SNRNP25-203ENST00000397876 FMR1Q06787 632 aaKnown RBP eCLIP18.4■□□□□ 0.54
SNRNP25-203ENST00000397876 METTL22Q9BUU2 404 aaPredicted RBP18.4■□□□□ 0.54
SNRNP25-203ENST00000397876 WDR33Q9C0J8 1336 aaKnown RBP18.4■□□□□ 0.54
SNRNP25-203ENST00000397876 RIMBP2O15034 1052 aa18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 CTCFP49711 727 aaPredicted RBP18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 CCDC152Q4G0S7 254 aa18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 PAXIP1Q6ZW49 1069 aaPredicted RBP18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 ZC3H15Q8WU90 426 aaKnown RBP18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 TSR2Q969E8 191 aaKnown RBP18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 STK31Q9BXU1 1019 aa18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 DBNDD1Q9H9R9 158 aa18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 POLLQ9UGP5 575 aa18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 CNOT7Q9UIV1 285 aaKnown RBP18.39■□□□□ 0.53
SNRNP25-203ENST00000397876 H7C1D1 291 aa18.38■□□□□ 0.53
SNRNP25-203ENST00000397876 PDE8AO60658 829 aa18.38■□□□□ 0.53
SNRNP25-203ENST00000397876 ECE1P42892 770 aa18.38■□□□□ 0.53
SNRNP25-203ENST00000397876 CCDC27Q2M243 656 aa18.38■□□□□ 0.53
SNRNP25-203ENST00000397876 MICALL2Q8IY33 904 aa18.38■□□□□ 0.53
SNRNP25-203ENST00000397876 TSPYL6Q8N831 410 aa18.38■□□□□ 0.53
SNRNP25-203ENST00000397876 WBP1LQ9NX94 342 aa18.38■□□□□ 0.53
SNRNP25-203ENST00000397876 THSD7BQ9C0I4 1608 aa18.38■□□□□ 0.53
SNRNP25-203ENST00000397876 PSMD14O00487 310 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 ECE2O60344 883 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 MAP2K1Q02750 393 aaPredicted RBP18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 CCDC184Q52MB2 194 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 CST9Q5W186 159 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 TBC1D16Q8TBP0 767 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 TRPM4Q8TD43 1214 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 CAPNS2Q96L46 248 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 GLIS2Q9BZE0 524 aaPredicted RBP18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 PRDM10Q9NQV6 1147 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 SEC31BQ9NQW1 1179 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 PGAP2Q9UHJ9 254 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 MAP3K2Q9Y2U5 619 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 TLL2Q9Y6L7 1015 aa18.37■□□□□ 0.53
SNRNP25-203ENST00000397876 CELF2O95319 508 aaKnown RBP18.36■□□□□ 0.53
SNRNP25-203ENST00000397876 KSR2Q6VAB6 950 aa18.36■□□□□ 0.53
SNRNP25-203ENST00000397876 DPF2Q92785 391 aa18.36■□□□□ 0.53
SNRNP25-203ENST00000397876 ZC3H12CQ9C0D7 883 aaKnown RBP18.36■□□□□ 0.53
SNRNP25-203ENST00000397876 PODXL2Q9NZ53 605 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms