RNA–Protein interactions for RNA: ENST00000397642.3

AL390728.1-201, humanhuman

BASIC

Gene AL390728.1, Length 1,941 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390728.1-201ENST00000397642 GPBP1L1Q9HC44 474 aaPredicted RBP13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 SMC4Q9NTJ3 1288 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 FER1L6Q2WGJ9 1857 aa13.56□□□□□ -0.24
AL390728.1-201ENST00000397642 FKBP4Q02790 459 aaKnown RBP eCLIP13.55□□□□□ -0.24
AL390728.1-201ENST00000397642 SLC51AQ86UW1 340 aa13.55□□□□□ -0.24
AL390728.1-201ENST00000397642 ATP6V0A2Q9Y487 856 aa13.55□□□□□ -0.24
AL390728.1-201ENST00000397642 CDHR2Q9BYE9 1310 aa13.55□□□□□ -0.24
AL390728.1-201ENST00000397642 DDX60Q8IY21 1712 aaKnown RBP13.55□□□□□ -0.24
AL390728.1-201ENST00000397642 LAMB2P55268 1798 aa13.55□□□□□ -0.24
AL390728.1-201ENST00000397642 CCDC152Q4G0S7 254 aa13.54□□□□□ -0.24
AL390728.1-201ENST00000397642 GRIPAP1Q4V328 841 aa13.54□□□□□ -0.24
AL390728.1-201ENST00000397642 CCDC85AQ96PX6 553 aaPredicted RBP13.54□□□□□ -0.24
AL390728.1-201ENST00000397642 ZNF277Q9NRM2 450 aaPredicted RBP13.54□□□□□ -0.24
AL390728.1-201ENST00000397642 CCDC88AQ3V6T2 1871 aa13.54□□□□□ -0.24
AL390728.1-201ENST00000397642 SP8Q8IXZ3 490 aa13.54□□□□□ -0.24
AL390728.1-201ENST00000397642 CELF1Q92879 486 aaKnown RBP13.54□□□□□ -0.24
AL390728.1-201ENST00000397642 PTPRCP08575 1304 aa13.54□□□□□ -0.24
AL390728.1-201ENST00000397642 RPS8P62241 208 aaKnown RBP13.53□□□□□ -0.24
AL390728.1-201ENST00000397642 PSMD1Q99460 953 aa13.53□□□□□ -0.24
AL390728.1-201ENST00000397642 SEC31BQ9NQW1 1179 aa13.53□□□□□ -0.24
AL390728.1-201ENST00000397642 TAF1P21675 1872 aa13.53□□□□□ -0.24
AL390728.1-201ENST00000397642 RARSP54136 660 aaKnown RBP13.52□□□□□ -0.24
AL390728.1-201ENST00000397642 CTSWP56202 376 aa13.52□□□□□ -0.24
AL390728.1-201ENST00000397642 TTLL11Q8NHH1 800 aa13.52□□□□□ -0.24
AL390728.1-201ENST00000397642 SRCIN1Q9C0H9 1055 aa13.52□□□□□ -0.24
AL390728.1-201ENST00000397642 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.24
AL390728.1-201ENST00000397642 ZC3H4Q9UPT8 1303 aaKnown RBP13.52□□□□□ -0.24
AL390728.1-201ENST00000397642 CASP7P55210 303 aa13.52□□□□□ -0.25
AL390728.1-201ENST00000397642 TMC4Q7Z404 712 aa13.52□□□□□ -0.25
AL390728.1-201ENST00000397642 SUPT16HQ9Y5B9 1047 aaKnown RBP13.52□□□□□ -0.25
AL390728.1-201ENST00000397642 ALDH1L1O75891 902 aa13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 IARSP41252 1262 aaKnown RBP13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 SNED1Q8TER0 1413 aa13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 C9orf78Q9NZ63 289 aaPredicted RBP13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 NOB1Q9ULX3 412 aaKnown RBP13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 KDM2BQ8NHM5 1336 aa13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 GRM8O00222 908 aa13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 DPP8Q6V1X1 898 aaPredicted RBP13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 MPNDQ8N594 471 aa13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 PLA2G12BQ9BX93 195 aa13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 GREM2Q9H772 168 aa13.51□□□□□ -0.25
AL390728.1-201ENST00000397642 GLTPD2A6NH11 291 aa13.5□□□□□ -0.25
AL390728.1-201ENST00000397642 BRPF1P55201 1214 aaPredicted RBP13.5□□□□□ -0.25
AL390728.1-201ENST00000397642 NSFL1CQ9UNZ2 370 aaKnown RBP13.5□□□□□ -0.25
AL390728.1-201ENST00000397642 ANKRD18AQ8IVF6 992 aa13.49□□□□□ -0.25
AL390728.1-201ENST00000397642 JDP2Q8WYK2 163 aa13.49□□□□□ -0.25
AL390728.1-201ENST00000397642 NMRK2Q9NPI5 230 aa13.49□□□□□ -0.25
AL390728.1-201ENST00000397642 DICER1Q9UPY3 1922 aaKnown RBP13.49□□□□□ -0.25
AL390728.1-201ENST00000397642 CSF1RP07333 972 aa13.49□□□□□ -0.25
AL390728.1-201ENST00000397642 LARGE2Q8N3Y3 721 aa13.49□□□□□ -0.25
AL390728.1-201ENST00000397642 CDC5LQ99459 802 aaKnown RBP13.49□□□□□ -0.25
AL390728.1-201ENST00000397642 RTFDC1Q9BY42 306 aaPredicted RBP13.49□□□□□ -0.25
AL390728.1-201ENST00000397642 SUPT20HQ8NEM7 779 aa13.48□□□□□ -0.25
AL390728.1-201ENST00000397642 RRAGCQ9HB90 399 aa13.48□□□□□ -0.25
AL390728.1-201ENST00000397642 COL4A1P02462 1669 aa13.48□□□□□ -0.25
AL390728.1-201ENST00000397642 PPIP5K2O43314 1243 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 BCAR3O75815 825 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 NBPF7P0C2Y1 421 aaPredicted RBP13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 ITGA6P23229 1130 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 FOXO4P98177 505 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 AOC3Q16853 763 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 MYH3P11055 1940 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 KIF3CO14782 793 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 DDNO94850 711 aaPredicted RBP13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 GPSM2P81274 684 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 FAM161AQ3B820 660 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 API5Q9BZZ5 524 aaKnown RBP13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 VPS33BQ9H267 617 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 ANKIB1Q9P2G1 1089 aa13.47□□□□□ -0.25
AL390728.1-201ENST00000397642 RTL9Q8NET4 1388 aa13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 KIF16BQ96L93 1317 aa13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 C6orf229H3BNL8 230 aa13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 FZD9O00144 591 aa13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 EPHA10Q5JZY3 1008 aa13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 LMBR1LQ6UX01 489 aa13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 ANP32EQ9BTT0 268 aa13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 CHMP3Q9Y3E7 222 aa13.46□□□□□ -0.25
AL390728.1-201ENST00000397642 ARHGAP45Q92619 1136 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 FRAT1Q92837 279 aaPredicted RBP13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 USP44Q9H0E7 712 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 POLLQ9UGP5 575 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 TIAM2Q8IVF5 1701 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 UTYO14607 1347 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 IPO8O15397 1037 aaKnown RBP13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 VEGFAP15692 232 aaPredicted RBP13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 IGHMBP2P38935 993 aaKnown RBP13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 KIAA2012Q0VF49 1180 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 IFIT5Q13325 482 aaKnown RBP13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 WASHC4Q2M389 1173 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 NIM1KQ8IY84 436 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 SUCLG2Q96I99 432 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 PODXL2Q9NZ53 605 aa13.45□□□□□ -0.26
AL390728.1-201ENST00000397642 ANKRD18BA2A2Z9 1011 aa13.44□□□□□ -0.26
AL390728.1-201ENST00000397642 EIF6P56537 245 aaKnown RBP13.44□□□□□ -0.26
AL390728.1-201ENST00000397642 C1QTNF8P60827 252 aa13.44□□□□□ -0.26
AL390728.1-201ENST00000397642 TBC1D16Q8TBP0 767 aa13.44□□□□□ -0.26
AL390728.1-201ENST00000397642 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms