RNA–Protein interactions for RNA: ENST00000396372.2

CALCA-203, Transcript of calcitonin related polypeptide alpha, humanhuman

TSL 1 (best) BASIC

Gene CALCA, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCA-203ENST00000396372 DPP8Q6V1X1 898 aaPredicted RBP18.29■□□□□ 0.52
CALCA-203ENST00000396372 LDHDQ86WU2 507 aa18.29■□□□□ 0.52
CALCA-203ENST00000396372 ADAMTSL1Q8N6G6 1762 aa18.29■□□□□ 0.52
CALCA-203ENST00000396372 IRS4O14654 1257 aaPredicted RBP18.28■□□□□ 0.52
CALCA-203ENST00000396372 SP8Q8IXZ3 490 aa18.28■□□□□ 0.52
CALCA-203ENST00000396372 MPNDQ8N594 471 aa18.28■□□□□ 0.52
CALCA-203ENST00000396372 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
CALCA-203ENST00000396372 DUOX1Q9NRD9 1551 aa18.28■□□□□ 0.52
CALCA-203ENST00000396372 PCNTO95613 3336 aa18.28■□□□□ 0.52
CALCA-203ENST00000396372 DDX58O95786 925 aaKnown RBP18.27■□□□□ 0.52
CALCA-203ENST00000396372 TRIM28Q13263 835 aaKnown RBP18.27■□□□□ 0.52
CALCA-203ENST00000396372 SUPT20HQ8NEM7 779 aa18.27■□□□□ 0.52
CALCA-203ENST00000396372 CLEC11AQ9Y240 323 aa18.27■□□□□ 0.52
CALCA-203ENST00000396372 LMOD1P29536 600 aaPredicted RBP18.26■□□□□ 0.51
CALCA-203ENST00000396372 CELF1Q92879 486 aaKnown RBP18.26■□□□□ 0.51
CALCA-203ENST00000396372 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
CALCA-203ENST00000396372 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
CALCA-203ENST00000396372 SF3B3Q15393 1217 aaKnown RBP18.25■□□□□ 0.51
CALCA-203ENST00000396372 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
CALCA-203ENST00000396372 ZBTB38Q8NAP3 1195 aaPredicted RBP18.25■□□□□ 0.51
CALCA-203ENST00000396372 JARID2Q92833 1246 aaPredicted RBP18.25■□□□□ 0.51
CALCA-203ENST00000396372 RTFDC1Q9BY42 306 aaPredicted RBP18.25■□□□□ 0.51
CALCA-203ENST00000396372 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
CALCA-203ENST00000396372 IL16Q14005 1332 aa18.24■□□□□ 0.51
CALCA-203ENST00000396372 MYH3P11055 1940 aa18.24■□□□□ 0.51
CALCA-203ENST00000396372 TMC4Q7Z404 712 aa18.24■□□□□ 0.51
CALCA-203ENST00000396372 CCDC191Q8NCU4 936 aa18.24■□□□□ 0.51
CALCA-203ENST00000396372 METTL22Q9BUU2 404 aaPredicted RBP18.24■□□□□ 0.51
CALCA-203ENST00000396372 CWC25Q9NXE8 425 aaPredicted RBP18.24■□□□□ 0.51
CALCA-203ENST00000396372 FANCIQ9NVI1 1328 aa18.23■□□□□ 0.51
CALCA-203ENST00000396372 SCNN1DP51172 638 aa18.23■□□□□ 0.51
CALCA-203ENST00000396372 KIAA2012Q0VF49 1180 aa18.23■□□□□ 0.51
CALCA-203ENST00000396372 PNMA8AQ86V59 439 aaPredicted RBP18.23■□□□□ 0.51
CALCA-203ENST00000396372 JMYQ8N9B5 988 aa18.23■□□□□ 0.51
CALCA-203ENST00000396372 VPS33BQ9H267 617 aa18.23■□□□□ 0.51
CALCA-203ENST00000396372 ZNRF3Q9ULT6 936 aa18.23■□□□□ 0.51
CALCA-203ENST00000396372 SPEF2Q9C093 1822 aa18.23■□□□□ 0.51
CALCA-203ENST00000396372 CACNA1FO60840 1977 aa18.22■□□□□ 0.51
CALCA-203ENST00000396372 PI4KAP2A4QPH2 592 aa18.22■□□□□ 0.51
CALCA-203ENST00000396372 PCCAP05165 728 aaPredicted RBP18.22■□□□□ 0.51
CALCA-203ENST00000396372 EPS15P42566 896 aa18.22■□□□□ 0.51
CALCA-203ENST00000396372 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
CALCA-203ENST00000396372 FAM9BQ8IZU0 186 aa18.22■□□□□ 0.51
CALCA-203ENST00000396372 PI4KAP1Q8N8J0 262 aa18.22■□□□□ 0.51
CALCA-203ENST00000396372 CCDC85AQ96PX6 553 aaPredicted RBP18.22■□□□□ 0.51
CALCA-203ENST00000396372 PASKQ96RG2 1323 aa18.22■□□□□ 0.51
CALCA-203ENST00000396372 HSP90B1P14625 803 aaKnown RBP18.21■□□□□ 0.51
CALCA-203ENST00000396372 CXCL9Q07325 125 aa18.21■□□□□ 0.51
CALCA-203ENST00000396372 KSR2Q6VAB6 950 aa18.21■□□□□ 0.51
CALCA-203ENST00000396372 SEC31BQ9NQW1 1179 aa18.21■□□□□ 0.51
CALCA-203ENST00000396372 CREBZFQ9NS37 354 aa18.21■□□□□ 0.51
CALCA-203ENST00000396372 NSFL1CQ9UNZ2 370 aaKnown RBP18.21■□□□□ 0.51
CALCA-203ENST00000396372 RAD17O75943 681 aa18.2■□□□□ 0.5
CALCA-203ENST00000396372 GPSM2P81274 684 aa18.2■□□□□ 0.5
CALCA-203ENST00000396372 G2E3Q7L622 706 aa18.2■□□□□ 0.5
CALCA-203ENST00000396372 MKRN1Q9UHC7 482 aaKnown RBP18.2■□□□□ 0.5
CALCA-203ENST00000396372 C6orf229H3BNL8 230 aa18.19■□□□□ 0.5
CALCA-203ENST00000396372 PDE8AO60658 829 aa18.19■□□□□ 0.5
CALCA-203ENST00000396372 ITGBL1O95965 494 aaPredicted RBP18.19■□□□□ 0.5
CALCA-203ENST00000396372 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
CALCA-203ENST00000396372 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
CALCA-203ENST00000396372 GMPSP49915 693 aaPredicted RBP18.19■□□□□ 0.5
CALCA-203ENST00000396372 RPS8P62241 208 aaKnown RBP18.19■□□□□ 0.5
CALCA-203ENST00000396372 NEXNQ0ZGT2 675 aa18.19■□□□□ 0.5
CALCA-203ENST00000396372 CCDC152Q4G0S7 254 aa18.19■□□□□ 0.5
CALCA-203ENST00000396372 NCBP3Q53F19 620 aaKnown RBP18.19■□□□□ 0.5
CALCA-203ENST00000396372 CIAPIN1Q6FI81 312 aa18.19■□□□□ 0.5
CALCA-203ENST00000396372 CNTROBQ8N137 903 aa18.19■□□□□ 0.5
CALCA-203ENST00000396372 RIMBP2O15034 1052 aa18.18■□□□□ 0.5
CALCA-203ENST00000396372 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
CALCA-203ENST00000396372 WDR63Q8IWG1 891 aa18.18■□□□□ 0.5
CALCA-203ENST00000396372 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
CALCA-203ENST00000396372 GPRC5DQ9NZD1 345 aa18.18■□□□□ 0.5
CALCA-203ENST00000396372 YDJCA8MPS7 323 aa18.17■□□□□ 0.5
CALCA-203ENST00000396372 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
CALCA-203ENST00000396372 WASHC4Q2M389 1173 aa18.17■□□□□ 0.5
CALCA-203ENST00000396372 BCL2L13Q9BXK5 485 aa18.17■□□□□ 0.5
CALCA-203ENST00000396372 DBNDD1Q9H9R9 158 aa18.17■□□□□ 0.5
CALCA-203ENST00000396372 POLLQ9UGP5 575 aa18.17■□□□□ 0.5
CALCA-203ENST00000396372 TRPM7Q96QT4 1865 aa18.16■□□□□ 0.5
CALCA-203ENST00000396372 TMEM88BA6NKF7 163 aa18.16■□□□□ 0.5
CALCA-203ENST00000396372 CTSWP56202 376 aa18.16■□□□□ 0.5
CALCA-203ENST00000396372 FLIIQ13045 1269 aa18.16■□□□□ 0.5
CALCA-203ENST00000396372 FKBP5Q13451 457 aaPredicted RBP18.16■□□□□ 0.5
CALCA-203ENST00000396372 TNIP1Q15025 636 aa18.16■□□□□ 0.5
CALCA-203ENST00000396372 USP50Q70EL3 339 aaPredicted RBP18.16■□□□□ 0.5
CALCA-203ENST00000396372 CDHR2Q9BYE9 1310 aa18.16■□□□□ 0.5
CALCA-203ENST00000396372 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
CALCA-203ENST00000396372 NEURL1BA8MQ27 555 aa18.15■□□□□ 0.5
CALCA-203ENST00000396372 TBC1D16Q8TBP0 767 aa18.15■□□□□ 0.5
CALCA-203ENST00000396372 SPINK5Q9NQ38 1064 aaPredicted RBP18.15■□□□□ 0.5
CALCA-203ENST00000396372 ADARB2Q9NS39 739 aaKnown RBP18.15■□□□□ 0.5
CALCA-203ENST00000396372 ANKIB1Q9P2G1 1089 aa18.15■□□□□ 0.5
CALCA-203ENST00000396372 CNTNAP1P78357 1384 aa18.15■□□□□ 0.5
CALCA-203ENST00000396372 UFL1O94874 794 aa18.14■□□□□ 0.49
CALCA-203ENST00000396372 DOK7Q18PE1 504 aa18.14■□□□□ 0.49
CALCA-203ENST00000396372 UBE3BQ7Z3V4 1068 aa18.14■□□□□ 0.49
CALCA-203ENST00000396372 ANKRD18AQ8IVF6 992 aa18.14■□□□□ 0.49
CALCA-203ENST00000396372 EYA3Q99504 573 aa18.14■□□□□ 0.49
CALCA-203ENST00000396372 ECE2O60344 883 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms