RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 ATP2B3Q16720 1220 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 DNAI2Q9GZS0 605 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 KIF5BP33176 963 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 IL6STP40189 918 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-203ENST00000393287 SLC27A3Q5K4L6 730 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 R3HCC1Q9Y3T6 440 aaKnown RBP9.55□□□□□ -0.88
ATXN3-203ENST00000393287 NUTM1Q86Y26 1132 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 ANKRD44Q8N8A2 993 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 C16orf71Q8IYS4 520 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-203ENST00000393287 KRT23Q9C075 422 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 RAD50Q92878 1312 aa9.55□□□□□ -0.88
ATXN3-203ENST00000393287 GIGYF1O75420 1035 aaPredicted RBP9.55□□□□□ -0.88
ATXN3-203ENST00000393287 AOX1Q06278 1338 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 WDR33Q9C0J8 1336 aaKnown RBP9.54□□□□□ -0.88
ATXN3-203ENST00000393287 H0YIN7 160 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 A1BGP04217 495 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 PALLDQ8WX93 1383 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 ZNF213O14771 459 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 IL1RAPL2Q9NP60 686 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 MBD3O95983 291 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 ATP2B2Q01814 1243 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 PIGBQ92521 554 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 FOXD4L1Q9NU39 408 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 ADAMTSL3P82987 1691 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 MPHOSPH10O00566 681 aaKnown RBP9.54□□□□□ -0.88
ATXN3-203ENST00000393287 NEK4P51957 841 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 TMTC2Q8N394 836 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 ASAP1Q9ULH1 1129 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 MROH5Q6ZUA9 1318 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 SASS6Q6UVJ0 657 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 TRIM35Q9UPQ4 493 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 EXOC6BQ9Y2D4 811 aa9.54□□□□□ -0.88
ATXN3-203ENST00000393287 CWC27Q6UX04 472 aaKnown RBP9.53□□□□□ -0.88
ATXN3-203ENST00000393287 CTCFLQ8NI51 663 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-203ENST00000393287 ZNF219Q9P2Y4 722 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-203ENST00000393287 DDX49Q9Y6V7 483 aaKnown RBP9.53□□□□□ -0.88
ATXN3-203ENST00000393287 FAM13BQ9NYF5 915 aa9.53□□□□□ -0.88
ATXN3-203ENST00000393287 CIZ1Q9ULV3 898 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-203ENST00000393287 ADRA2BP18089 450 aa9.53□□□□□ -0.88
ATXN3-203ENST00000393287 B4DLN1 442 aa9.53□□□□□ -0.88
ATXN3-203ENST00000393287 MRPL12P52815 198 aaKnown RBP9.53□□□□□ -0.88
ATXN3-203ENST00000393287 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
ATXN3-203ENST00000393287 ZC3H12CQ9C0D7 883 aaKnown RBP9.53□□□□□ -0.88
ATXN3-203ENST00000393287 GRIPAP1Q4V328 841 aa9.52□□□□□ -0.88
ATXN3-203ENST00000393287 KDRP35968 1356 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 CRKLP46109 303 aaKnown RBP9.52□□□□□ -0.89
ATXN3-203ENST00000393287 BMP2KLQ5H9B9 411 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 CATIPQ7Z7H3 387 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 PYM1Q9BRP8 204 aaKnown RBP9.52□□□□□ -0.89
ATXN3-203ENST00000393287 FBXO3Q9UK99 471 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 HMGN5P82970 282 aaKnown RBP9.52□□□□□ -0.89
ATXN3-203ENST00000393287 TXNRD1Q16881 649 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 RBM27Q9P2N5 1060 aaKnown RBP9.52□□□□□ -0.89
ATXN3-203ENST00000393287 C3P01024 1663 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 K7ELQ4 463 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-203ENST00000393287 TTLL12Q14166 644 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-203ENST00000393287 FNBP4Q8N3X1 1017 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-203ENST00000393287 TSPYL6Q8N831 410 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 SH2D4AQ9H788 454 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 CFAP45Q9UL16 551 aa9.52□□□□□ -0.89
ATXN3-203ENST00000393287 LMBR1LQ6UX01 489 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 JAKMIP1Q96N16 626 aaKnown RBP9.51□□□□□ -0.89
ATXN3-203ENST00000393287 USP16Q9Y5T5 823 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 IPO7O95373 1038 aaKnown RBP9.51□□□□□ -0.89
ATXN3-203ENST00000393287 KRT24Q2M2I5 525 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 NUP133Q8WUM0 1156 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 RPS6KA4O75676 772 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 BMP2KQ9NSY1 1161 aaPredicted RBP9.51□□□□□ -0.89
ATXN3-203ENST00000393287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.51□□□□□ -0.89
ATXN3-203ENST00000393287 GNAQP50148 359 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 BOLA2Q9H3K6 86 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 STIM1Q13586 685 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 GGA1Q9UJY5 639 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 CALM1P0DP23 149 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 CALM2P0DP24 149 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 CALM3P0DP25 149 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 NUCB1Q02818 461 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 TCIRG1Q13488 830 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 TTC22Q5TAA0 569 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 RAB34Q9BZG1 259 aa9.51□□□□□ -0.89
ATXN3-203ENST00000393287 IQGAP1P46940 1657 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 ZNF76P36508 570 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 EIF6P56537 245 aaKnown RBP9.5□□□□□ -0.89
ATXN3-203ENST00000393287 STK38Q15208 465 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 PUM3Q15397 648 aaKnown RBP9.5□□□□□ -0.89
ATXN3-203ENST00000393287 HSP90AA2PQ14568 343 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-203ENST00000393287 RNF123Q5XPI4 1314 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 NCOA7Q8NI08 942 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 PLEKHF1Q96S99 279 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 SLC12A7Q9Y666 1083 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 RTL9Q8NET4 1388 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 SAMD1Q6SPF0 538 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-203ENST00000393287 TRIM21P19474 475 aaKnown RBP9.5□□□□□ -0.89
ATXN3-203ENST00000393287 MARCH10Q8NA82 808 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-203ENST00000393287 TBC1D22AQ8WUA7 517 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 CNKSR1Q969H4 720 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 NAA16Q6N069 864 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-203ENST00000393287 MFSD6Q6ZSS7 791 aa9.5□□□□□ -0.89
ATXN3-203ENST00000393287 CCDC8Q9H0W5 538 aaPredicted RBP9.5□□□□□ -0.89
ATXN3-203ENST00000393287 ZBTB1Q9Y2K1 713 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms