RNA–Protein interactions for RNA: ENST00000391975.5

HDLBP-203, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 6,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-203ENST00000391975 GCOM1H8Y6P7 765 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-203ENST00000391975 MYZAPP0CAP1 466 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 CNNM3Q8NE01 707 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 CCDC12Q8WUD4 166 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-203ENST00000391975 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 DUOX2Q9NRD8 1548 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 LMOD1P29536 600 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-203ENST00000391975 RAB11FIP4Q86YS3 637 aa13.32□□□□□ -0.28
HDLBP-203ENST00000391975 DBF4Q9UBU7 674 aaPredicted RBP13.32□□□□□ -0.28
HDLBP-203ENST00000391975 HSP90AA4PQ58FG1 418 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■□□□□ 11.3
HDLBP-203ENST00000391975 PALD1Q9ULE6 856 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 ADGRL1O94910 1474 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 ITSN2Q9NZM3 1697 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 IBTKQ9P2D0 1353 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-203ENST00000391975 MRPS27Q92552 414 aaKnown RBP13.31□□□□□ -0.28
HDLBP-203ENST00000391975 CCDC175P0C221 793 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 MCM3P25205 808 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 ORC3Q9UBD5 711 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-203ENST00000391975 GOLGA8BA8MQT2 603 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 UBASH3AP57075 661 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 GABPB1Q06547 395 aaPredicted RBP13.31□□□□□ -0.28
HDLBP-203ENST00000391975 GOPCQ9HD26 462 aa13.31□□□□□ -0.28
HDLBP-203ENST00000391975 SOS1Q07889 1333 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-203ENST00000391975 EIF4A2Q14240 407 aaKnown RBP13.3□□□□□ -0.28
HDLBP-203ENST00000391975 GRIPAP1Q4V328 841 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 GIGYF2Q6Y7W6 1299 aaKnown RBP13.3□□□□□ -0.28
HDLBP-203ENST00000391975 ZBTB9Q96C00 473 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 ERO1AQ96HE7 468 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 CBX8Q9HC52 389 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 PTPRTO14522 1441 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 IFFO1Q0D2I5 559 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 MCM6Q14566 821 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 LARP1Q6PKG0 1096 aaKnown RBP13.3□□□□□ -0.28
HDLBP-203ENST00000391975 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-203ENST00000391975 SNX14Q9Y5W7 946 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 KDM5BQ9UGL1 1544 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 FOXO3O43524 673 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 TTLL12Q14166 644 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-203ENST00000391975 ZNF75DP51815 510 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 NMIQ13287 307 aaPredicted RBP13.3□□□□□ -0.28
HDLBP-203ENST00000391975 CREB3L3Q68CJ9 461 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 MPRIPQ6WCQ1 1025 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 WWC3Q9ULE0 1092 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 USP16Q9Y5T5 823 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 TRAPPC8Q9Y2L5 1435 aa13.3□□□□□ -0.28
HDLBP-203ENST00000391975 GOLGA6L9A6NEM1 432 aa13.29□□□□□ -0.28
HDLBP-203ENST00000391975 ELF2Q15723 593 aa13.29□□□□□ -0.28
HDLBP-203ENST00000391975 PA2G4Q9UQ80 394 aaKnown RBP13.29□□□□□ -0.28
HDLBP-203ENST00000391975 GTF2A1P52655 376 aaPredicted RBP13.29□□□□□ -0.28
HDLBP-203ENST00000391975 MYD88Q99836 296 aa13.29□□□□□ -0.28
HDLBP-203ENST00000391975 IFIT1P09914 478 aaKnown RBP13.29□□□□□ -0.28
HDLBP-203ENST00000391975 LRMPQ12912 555 aa13.29□□□□□ -0.28
HDLBP-203ENST00000391975 IFNKQ9P0W0 207 aa13.29□□□□□ -0.28
HDLBP-203ENST00000391975 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
HDLBP-203ENST00000391975 Q6ZUG5 572 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 DDX46Q7L014 1031 aaKnown RBP13.28□□□□□ -0.28
HDLBP-203ENST00000391975 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 SGSM2O43147 1006 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 CCDC57Q2TAC2 916 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 RUFY3Q7L099 469 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 ABCC2Q92887 1545 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 ABCC4O15439 1325 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 GOLIM4O00461 696 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 C6orf163Q5TEZ5 329 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-203ENST00000391975 HAND2P61296 217 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.28□□□□□ -0.28
HDLBP-203ENST00000391975 CNNM1Q9NRU3 951 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 RAI14Q9P0K7 980 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 NSFL1CQ9UNZ2 370 aaKnown RBP13.28□□□□□ -0.28
HDLBP-203ENST00000391975 PPIP5K1Q6PFW1 1433 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 IDH1O75874 414 aaKnown RBP13.28□□□□□ -0.28
HDLBP-203ENST00000391975 MATR3P43243 847 aaKnown RBP eCLIP13.28□□□□□ -0.281e-7■■■■□ 23.2
HDLBP-203ENST00000391975 PYCARDQ9ULZ3 195 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 LMTK3Q96Q04 1460 aa13.28□□□□□ -0.28
HDLBP-203ENST00000391975 ZPR1O75312 459 aa13.27□□□□□ -0.28
HDLBP-203ENST00000391975 CETN2P41208 172 aa13.27□□□□□ -0.28
HDLBP-203ENST00000391975 PNMA6EA0A0J9YXQ4 647 aa13.27□□□□□ -0.28
HDLBP-203ENST00000391975 MTHFSDQ2M296 383 aaKnown RBP13.27□□□□□ -0.28
HDLBP-203ENST00000391975 LIG1P18858 919 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 EIF5P55010 431 aaKnown RBP13.27□□□□□ -0.29
HDLBP-203ENST00000391975 SEPT6Q14141 434 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 CCDC102BQ68D86 513 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 SRRTQ9BXP5 876 aaKnown RBP13.27□□□□□ -0.29
HDLBP-203ENST00000391975 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-203ENST00000391975 CHPF2Q9P2E5 772 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 ZNF526Q8TF50 670 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-203ENST00000391975 RAD50Q92878 1312 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 WDR7Q9Y4E6 1490 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 SYKP43405 635 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 DMTNQ08495 405 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 PLCH2O75038 1416 aa13.27□□□□□ -0.29
HDLBP-203ENST00000391975 DENND4BO75064 1496 aaPredicted RBP13.27□□□□□ -0.29
HDLBP-203ENST00000391975 POTEJP0CG39 1038 aa13.26□□□□□ -0.29
HDLBP-203ENST00000391975 HSPA4P34932 840 aa13.26□□□□□ -0.29
HDLBP-203ENST00000391975 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
HDLBP-203ENST00000391975 ZWINTO95229 277 aa13.26□□□□□ -0.29
HDLBP-203ENST00000391975 CLSTN2Q9H4D0 955 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms