RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TMC4Q7Z404 712 aa22.34■■□□□ 1.17
HMGN1-204ENST00000380749 ISCA1Q9BUE6 129 aa22.34■■□□□ 1.17
HMGN1-204ENST00000380749 RTFDC1Q9BY42 306 aaPredicted RBP22.34■■□□□ 1.17
HMGN1-204ENST00000380749 TMEM88BA6NKF7 163 aa22.33■■□□□ 1.17
HMGN1-204ENST00000380749 ITGBL1O95965 494 aaPredicted RBP22.33■■□□□ 1.17
HMGN1-204ENST00000380749 SCNN1DP51172 638 aa22.33■■□□□ 1.17
HMGN1-204ENST00000380749 GOLGA2Q08379 1002 aa22.33■■□□□ 1.17
HMGN1-204ENST00000380749 MPNDQ8N594 471 aa22.33■■□□□ 1.17
HMGN1-204ENST00000380749 ATP5J2-PTCD1G3V325 749 aa22.32■■□□□ 1.16
HMGN1-204ENST00000380749 MAP1SQ66K74 1059 aaPredicted RBP22.31■■□□□ 1.16
HMGN1-204ENST00000380749 CNTROBQ8N137 903 aa22.31■■□□□ 1.16
HMGN1-204ENST00000380749 ZNF428Q96B54 188 aa22.31■■□□□ 1.16
HMGN1-204ENST00000380749 ZNRF3Q9ULT6 936 aa22.31■■□□□ 1.16
HMGN1-204ENST00000380749 RIC3Q7Z5B4 369 aa22.3■■□□□ 1.16
HMGN1-204ENST00000380749 FAM89AQ96GI7 184 aa22.3■■□□□ 1.16
HMGN1-204ENST00000380749 CHMP4AQ9BY43 222 aa22.3■■□□□ 1.16
HMGN1-204ENST00000380749 KIAA2012Q0VF49 1180 aa22.29■■□□□ 1.16
HMGN1-204ENST00000380749 EPS15P42566 896 aa22.28■■□□□ 1.16
HMGN1-204ENST00000380749 TRIM28Q13263 835 aaKnown RBP22.28■■□□□ 1.16
HMGN1-204ENST00000380749 SF3B3Q15393 1217 aaKnown RBP22.28■■□□□ 1.16
HMGN1-204ENST00000380749 COL13A1Q5TAT6 717 aaPredicted RBP22.28■■□□□ 1.16
HMGN1-204ENST00000380749 USP50Q70EL3 339 aaPredicted RBP22.28■■□□□ 1.16
HMGN1-204ENST00000380749 ELL2O00472 640 aaPredicted RBP22.27■■□□□ 1.16
HMGN1-204ENST00000380749 HSP90B1P14625 803 aaKnown RBP22.27■■□□□ 1.16
HMGN1-204ENST00000380749 GPRC5DQ9NZD1 345 aa22.27■■□□□ 1.16
HMGN1-204ENST00000380749 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
HMGN1-204ENST00000380749 CDHR2Q9BYE9 1310 aa22.27■■□□□ 1.16
HMGN1-204ENST00000380749 IRS4O14654 1257 aaPredicted RBP22.26■■□□□ 1.15
HMGN1-204ENST00000380749 CXCL9Q07325 125 aa22.26■■□□□ 1.15
HMGN1-204ENST00000380749 RTL5Q5HYW3 569 aaPredicted RBP22.26■■□□□ 1.15
HMGN1-204ENST00000380749 ADARB2Q9NS39 739 aaKnown RBP22.26■■□□□ 1.15
HMGN1-204ENST00000380749 COL4A1P02462 1669 aa22.26■■□□□ 1.15
HMGN1-204ENST00000380749 CIAPIN1Q6FI81 312 aa22.25■■□□□ 1.15
HMGN1-204ENST00000380749 PHAXQ9H814 394 aaKnown RBP22.25■■□□□ 1.15
HMGN1-204ENST00000380749 PSME4Q14997 1843 aa22.25■■□□□ 1.15
HMGN1-204ENST00000380749 POLR2AP24928 1970 aaKnown RBP22.25■■□□□ 1.15
HMGN1-204ENST00000380749 DDX58O95786 925 aaKnown RBP22.25■■□□□ 1.15
HMGN1-204ENST00000380749 TNIP1Q15025 636 aa22.25■■□□□ 1.15
HMGN1-204ENST00000380749 CCDC30Q5VVM6 783 aa22.25■■□□□ 1.15
HMGN1-204ENST00000380749 CELF1Q92879 486 aaKnown RBP22.25■■□□□ 1.15
HMGN1-204ENST00000380749 GMPSP49915 693 aaPredicted RBP22.24■■□□□ 1.15
HMGN1-204ENST00000380749 TNS4Q8IZW8 715 aa22.24■■□□□ 1.15
HMGN1-204ENST00000380749 ZBTB38Q8NAP3 1195 aaPredicted RBP22.24■■□□□ 1.15
HMGN1-204ENST00000380749 C8orf58Q8NAV2 365 aa22.24■■□□□ 1.15
HMGN1-204ENST00000380749 MYD88Q99836 296 aa22.24■■□□□ 1.15
HMGN1-204ENST00000380749 BCL2L13Q9BXK5 485 aa22.24■■□□□ 1.15
HMGN1-204ENST00000380749 ABT1Q9ULW3 272 aaKnown RBP22.24■■□□□ 1.15
HMGN1-204ENST00000380749 THSD7BQ9C0I4 1608 aa22.23■■□□□ 1.15
HMGN1-204ENST00000380749 SCN9AQ15858 1988 aa22.23■■□□□ 1.15
HMGN1-204ENST00000380749 RASSF10A6NK89 507 aa22.23■■□□□ 1.15
HMGN1-204ENST00000380749 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
HMGN1-204ENST00000380749 NSFL1CQ9UNZ2 370 aaKnown RBP22.23■■□□□ 1.15
HMGN1-204ENST00000380749 RAD17O75943 681 aa22.22■■□□□ 1.15
HMGN1-204ENST00000380749 VEGFBP49765 207 aa22.22■■□□□ 1.15
HMGN1-204ENST00000380749 AIDAQ96BJ3 306 aa22.21■■□□□ 1.15
HMGN1-204ENST00000380749 CWC25Q9NXE8 425 aaPredicted RBP22.21■■□□□ 1.15
HMGN1-204ENST00000380749 CCDC27Q2M243 656 aa22.2■■□□□ 1.14
HMGN1-204ENST00000380749 WASHC4Q2M389 1173 aa22.2■■□□□ 1.14
HMGN1-204ENST00000380749 DEFB115Q30KQ5 88 aa22.2■■□□□ 1.14
HMGN1-204ENST00000380749 EYA3Q99504 573 aa22.2■■□□□ 1.14
HMGN1-204ENST00000380749 C6orf229H3BNL8 230 aa22.19■■□□□ 1.14
HMGN1-204ENST00000380749 PCCAP05165 728 aaPredicted RBP22.19■■□□□ 1.14
HMGN1-204ENST00000380749 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
HMGN1-204ENST00000380749 RPS8P62241 208 aaKnown RBP22.19■■□□□ 1.14
HMGN1-204ENST00000380749 CCDC152Q4G0S7 254 aa22.19■■□□□ 1.14
HMGN1-204ENST00000380749 METTL22Q9BUU2 404 aaPredicted RBP22.19■■□□□ 1.14
HMGN1-204ENST00000380749 STK31Q9BXU1 1019 aa22.19■■□□□ 1.14
HMGN1-204ENST00000380749 YDJCA8MPS7 323 aa22.18■■□□□ 1.14
HMGN1-204ENST00000380749 TSR2Q969E8 191 aaKnown RBP22.18■■□□□ 1.14
HMGN1-204ENST00000380749 PDE8AO60658 829 aa22.17■■□□□ 1.14
HMGN1-204ENST00000380749 GPSM2P81274 684 aa22.17■■□□□ 1.14
HMGN1-204ENST00000380749 CCDC184Q52MB2 194 aa22.17■■□□□ 1.14
HMGN1-204ENST00000380749 TSPYL6Q8N831 410 aa22.17■■□□□ 1.14
HMGN1-204ENST00000380749 DBNDD1Q9H9R9 158 aa22.17■■□□□ 1.14
HMGN1-204ENST00000380749 MAP3K2Q9Y2U5 619 aa22.17■■□□□ 1.14
HMGN1-204ENST00000380749 H7C1D1 291 aa22.16■■□□□ 1.14
HMGN1-204ENST00000380749 RIMBP2O15034 1052 aa22.16■■□□□ 1.14
HMGN1-204ENST00000380749 WWC1Q8IX03 1113 aa22.16■■□□□ 1.14
HMGN1-204ENST00000380749 POLLQ9UGP5 575 aa22.16■■□□□ 1.14
HMGN1-204ENST00000380749 TRAF5O00463 557 aa22.15■■□□□ 1.14
HMGN1-204ENST00000380749 FOXN1O15353 648 aa22.15■■□□□ 1.14
HMGN1-204ENST00000380749 NEXNQ0ZGT2 675 aa22.15■■□□□ 1.14
HMGN1-204ENST00000380749 PAXIP1Q6ZW49 1069 aaPredicted RBP22.15■■□□□ 1.14
HMGN1-204ENST00000380749 ZC3H15Q8WU90 426 aaKnown RBP22.15■■□□□ 1.14
HMGN1-204ENST00000380749 SEC31BQ9NQW1 1179 aa22.15■■□□□ 1.14
HMGN1-204ENST00000380749 CNOT7Q9UIV1 285 aaKnown RBP22.15■■□□□ 1.14
HMGN1-204ENST00000380749 IL16Q14005 1332 aa22.15■■□□□ 1.14
HMGN1-204ENST00000380749 WDR33Q9C0J8 1336 aaKnown RBP22.15■■□□□ 1.14
HMGN1-204ENST00000380749 ECE2O60344 883 aa22.14■■□□□ 1.14
HMGN1-204ENST00000380749 FMR1Q06787 632 aaKnown RBP eCLIP22.14■■□□□ 1.142e-6■□□□□ 10.3
HMGN1-204ENST00000380749 TWISTNBQ3B726 338 aaPredicted RBP22.14■■□□□ 1.14
HMGN1-204ENST00000380749 KSR2Q6VAB6 950 aa22.14■■□□□ 1.14
HMGN1-204ENST00000380749 MICALL2Q8IY33 904 aa22.14■■□□□ 1.14
HMGN1-204ENST00000380749 TBC1D16Q8TBP0 767 aa22.14■■□□□ 1.14
HMGN1-204ENST00000380749 TRPM4Q8TD43 1214 aa22.14■■□□□ 1.14
HMGN1-204ENST00000380749 MRS2Q9HD23 443 aa22.14■■□□□ 1.14
HMGN1-204ENST00000380749 PODXL2Q9NZ53 605 aa22.14■■□□□ 1.14
HMGN1-204ENST00000380749 ANKIB1Q9P2G1 1089 aa22.14■■□□□ 1.14
HMGN1-204ENST00000380749 PSMD14O00487 310 aa22.13■■□□□ 1.13
HMGN1-204ENST00000380749 ECE1P42892 770 aa22.13■■□□□ 1.13
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