RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 SUPT20HQ8NEM7 779 aa21.91■■□□□ 1.1
SMN2-201ENST00000380741 GRAPLQ8TC17 118 aaPredicted RBP21.91■■□□□ 1.1
SMN2-201ENST00000380741 HYPKQ9NX55 129 aa21.91■■□□□ 1.1
SMN2-201ENST00000380741 ATP5J2-PTCD1G3V325 749 aa21.9■■□□□ 1.1
SMN2-201ENST00000380741 MPNDQ8N594 471 aa21.9■■□□□ 1.1
SMN2-201ENST00000380741 IFT57Q9NWB7 429 aa21.9■■□□□ 1.1
SMN2-201ENST00000380741 FAM89AQ96GI7 184 aa21.89■■□□□ 1.09
SMN2-201ENST00000380741 ZNRF3Q9ULT6 936 aa21.89■■□□□ 1.09
SMN2-201ENST00000380741 DUOX1Q9NRD9 1551 aa21.89■■□□□ 1.09
SMN2-201ENST00000380741 CXCL9Q07325 125 aa21.88■■□□□ 1.09
SMN2-201ENST00000380741 GNAI1P63096 354 aa21.87■■□□□ 1.09
SMN2-201ENST00000380741 KIAA2012Q0VF49 1180 aa21.87■■□□□ 1.09
SMN2-201ENST00000380741 COL4A1P02462 1669 aa21.87■■□□□ 1.09
SMN2-201ENST00000380741 ELL2O00472 640 aaPredicted RBP21.86■■□□□ 1.09
SMN2-201ENST00000380741 VEGFBP49765 207 aa21.86■■□□□ 1.09
SMN2-201ENST00000380741 CALD1Q05682 793 aaKnown RBP21.86■■□□□ 1.09
SMN2-201ENST00000380741 RTL5Q5HYW3 569 aaPredicted RBP21.86■■□□□ 1.09
SMN2-201ENST00000380741 USP50Q70EL3 339 aaPredicted RBP21.86■■□□□ 1.09
SMN2-201ENST00000380741 TMC4Q7Z404 712 aa21.86■■□□□ 1.09
SMN2-201ENST00000380741 TNS4Q8IZW8 715 aa21.86■■□□□ 1.09
SMN2-201ENST00000380741 TRIM28Q13263 835 aaKnown RBP21.85■■□□□ 1.09
SMN2-201ENST00000380741 SF3B3Q15393 1217 aaKnown RBP21.85■■□□□ 1.09
SMN2-201ENST00000380741 CELF1Q92879 486 aaKnown RBP21.85■■□□□ 1.09
SMN2-201ENST00000380741 PHAXQ9H814 394 aaKnown RBP21.85■■□□□ 1.09
SMN2-201ENST00000380741 GPRC5DQ9NZD1 345 aa21.85■■□□□ 1.09
SMN2-201ENST00000380741 TRPM7Q96QT4 1865 aa21.84■■□□□ 1.09
SMN2-201ENST00000380741 RIC3Q7Z5B4 369 aa21.84■■□□□ 1.09
SMN2-201ENST00000380741 ADARB2Q9NS39 739 aaKnown RBP21.84■■□□□ 1.09
SMN2-201ENST00000380741 RASSF10A6NK89 507 aa21.83■■□□□ 1.09
SMN2-201ENST00000380741 IRS4O14654 1257 aaPredicted RBP21.83■■□□□ 1.09
SMN2-201ENST00000380741 GMPSP49915 693 aaPredicted RBP21.83■■□□□ 1.09
SMN2-201ENST00000380741 FMR1Q06787 632 aaKnown RBP eCLIP21.83■■□□□ 1.09
SMN2-201ENST00000380741 GOLGA2Q08379 1002 aa21.83■■□□□ 1.09
SMN2-201ENST00000380741 CIAPIN1Q6FI81 312 aa21.83■■□□□ 1.09
SMN2-201ENST00000380741 C8orf58Q8NAV2 365 aa21.83■■□□□ 1.09
SMN2-201ENST00000380741 RAD17O75943 681 aa21.82■■□□□ 1.08
SMN2-201ENST00000380741 YDJCA8MPS7 323 aa21.81■■□□□ 1.08
SMN2-201ENST00000380741 DEFB115Q30KQ5 88 aa21.81■■□□□ 1.08
SMN2-201ENST00000380741 ABT1Q9ULW3 272 aaKnown RBP21.81■■□□□ 1.08
SMN2-201ENST00000380741 NSFL1CQ9UNZ2 370 aaKnown RBP21.81■■□□□ 1.08
SMN2-201ENST00000380741 CDHR2Q9BYE9 1310 aa21.8■■□□□ 1.08
SMN2-201ENST00000380741 TRAF5O00463 557 aa21.8■■□□□ 1.08
SMN2-201ENST00000380741 FOXN1O15353 648 aa21.8■■□□□ 1.08
SMN2-201ENST00000380741 CCDC184Q52MB2 194 aa21.8■■□□□ 1.08
SMN2-201ENST00000380741 ZBTB38Q8NAP3 1195 aaPredicted RBP21.8■■□□□ 1.08
SMN2-201ENST00000380741 MYD88Q99836 296 aa21.8■■□□□ 1.08
SMN2-201ENST00000380741 TNIP1Q15025 636 aa21.79■■□□□ 1.08
SMN2-201ENST00000380741 BCL2L13Q9BXK5 485 aa21.79■■□□□ 1.08
SMN2-201ENST00000380741 CAPN15O75808 1086 aa21.78■■□□□ 1.08
SMN2-201ENST00000380741 GPSM2P81274 684 aa21.78■■□□□ 1.08
SMN2-201ENST00000380741 WASHC4Q2M389 1173 aa21.78■■□□□ 1.08
SMN2-201ENST00000380741 POLLQ9UGP5 575 aa21.78■■□□□ 1.08
SMN2-201ENST00000380741 CCDC30Q5VVM6 783 aa21.77■■□□□ 1.08
SMN2-201ENST00000380741 CST9Q5W186 159 aa21.77■■□□□ 1.08
SMN2-201ENST00000380741 TSPYL6Q8N831 410 aa21.77■■□□□ 1.08
SMN2-201ENST00000380741 CCDC191Q8NCU4 936 aa21.77■■□□□ 1.08
SMN2-201ENST00000380741 DBNDD1Q9H9R9 158 aa21.77■■□□□ 1.08
SMN2-201ENST00000380741 WDR33Q9C0J8 1336 aaKnown RBP21.77■■□□□ 1.07
SMN2-201ENST00000380741 SHTN1A0MZ66 631 aa21.76■■□□□ 1.07
SMN2-201ENST00000380741 C6orf229H3BNL8 230 aa21.76■■□□□ 1.07
SMN2-201ENST00000380741 RIMBP2O15034 1052 aa21.76■■□□□ 1.07
SMN2-201ENST00000380741 RPS8P62241 208 aaKnown RBP21.76■■□□□ 1.07
SMN2-201ENST00000380741 AIDAQ96BJ3 306 aa21.76■■□□□ 1.07
SMN2-201ENST00000380741 WBP1LQ9NX94 342 aa21.76■■□□□ 1.07
SMN2-201ENST00000380741 THSD7BQ9C0I4 1608 aa21.76■■□□□ 1.07
SMN2-201ENST00000380741 PCCAP05165 728 aaPredicted RBP21.75■■□□□ 1.07
SMN2-201ENST00000380741 HSP90B1P14625 803 aaKnown RBP21.75■■□□□ 1.07
SMN2-201ENST00000380741 HIRAP54198 1017 aaPredicted RBP21.75■■□□□ 1.07
SMN2-201ENST00000380741 TRPM4Q8TD43 1214 aa21.75■■□□□ 1.07
SMN2-201ENST00000380741 TSR2Q969E8 191 aaKnown RBP21.75■■□□□ 1.07
SMN2-201ENST00000380741 METTL22Q9BUU2 404 aaPredicted RBP21.75■■□□□ 1.07
SMN2-201ENST00000380741 SEC31BQ9NQW1 1179 aa21.75■■□□□ 1.07
SMN2-201ENST00000380741 CWC25Q9NXE8 425 aaPredicted RBP21.75■■□□□ 1.07
SMN2-201ENST00000380741 CNOT7Q9UIV1 285 aaKnown RBP21.75■■□□□ 1.07
SMN2-201ENST00000380741 PSMD14O00487 310 aa21.74■■□□□ 1.07
SMN2-201ENST00000380741 DDX58O95786 925 aaKnown RBP21.74■■□□□ 1.07
SMN2-201ENST00000380741 CTCFP49711 727 aaPredicted RBP21.74■■□□□ 1.07
SMN2-201ENST00000380741 TBC1D16Q8TBP0 767 aa21.74■■□□□ 1.07
SMN2-201ENST00000380741 JARID2Q92833 1246 aaPredicted RBP21.74■■□□□ 1.07
SMN2-201ENST00000380741 GPR101Q96P66 508 aaPredicted RBP21.74■■□□□ 1.07
SMN2-201ENST00000380741 CHMP4AQ9BY43 222 aa21.74■■□□□ 1.07
SMN2-201ENST00000380741 GLIS2Q9BZE0 524 aaPredicted RBP21.74■■□□□ 1.07
SMN2-201ENST00000380741 PGAP2Q9UHJ9 254 aa21.74■■□□□ 1.07
SMN2-201ENST00000380741 ZBTB12Q9Y330 459 aaPredicted RBP21.74■■□□□ 1.07
SMN2-201ENST00000380741 PAXIP1Q6ZW49 1069 aaPredicted RBP21.73■■□□□ 1.07
SMN2-201ENST00000380741 MICALL2Q8IY33 904 aa21.73■■□□□ 1.07
SMN2-201ENST00000380741 ZC3H15Q8WU90 426 aaKnown RBP21.73■■□□□ 1.07
SMN2-201ENST00000380741 EYA3Q99504 573 aa21.73■■□□□ 1.07
SMN2-201ENST00000380741 MAP3K2Q9Y2U5 619 aa21.73■■□□□ 1.07
SMN2-201ENST00000380741 TLL2Q9Y6L7 1015 aa21.73■■□□□ 1.07
SMN2-201ENST00000380741 SCN9AQ15858 1988 aa21.73■■□□□ 1.07
SMN2-201ENST00000380741 H7C1D1 291 aa21.72■■□□□ 1.07
SMN2-201ENST00000380741 ECE2O60344 883 aa21.72■■□□□ 1.07
SMN2-201ENST00000380741 PDE8AO60658 829 aa21.72■■□□□ 1.07
SMN2-201ENST00000380741 DOK7Q18PE1 504 aa21.72■■□□□ 1.07
SMN2-201ENST00000380741 CCDC27Q2M243 656 aa21.72■■□□□ 1.07
SMN2-201ENST00000380741 CCDC152Q4G0S7 254 aa21.72■■□□□ 1.07
SMN2-201ENST00000380741 CAPNS2Q96L46 248 aa21.72■■□□□ 1.07
SMN2-201ENST00000380741 CCDC85AQ96PX6 553 aaPredicted RBP21.72■■□□□ 1.07
SMN2-201ENST00000380741 PRDM10Q9NQV6 1147 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms