RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 KLHL33A6NCF5 533 aa12.91□□□□□ -0.34
TWNK-202ENST00000370228 CHAF1AQ13111 956 aaPredicted RBP12.91□□□□□ -0.34
TWNK-202ENST00000370228 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
TWNK-202ENST00000370228 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
TWNK-202ENST00000370228 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
TWNK-202ENST00000370228 TMOD3Q9NYL9 352 aa12.91□□□□□ -0.34
TWNK-202ENST00000370228 JMYQ8N9B5 988 aa12.9□□□□□ -0.34
TWNK-202ENST00000370228 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
TWNK-202ENST00000370228 GOLGA6L22H0YM25 854 aa12.9□□□□□ -0.34
TWNK-202ENST00000370228 MVPQ14764 893 aaKnown RBP12.9□□□□□ -0.34
TWNK-202ENST00000370228 ILDR2Q71H61 639 aa12.9□□□□□ -0.34
TWNK-202ENST00000370228 C17orf53Q8N3J3 647 aaPredicted RBP12.9□□□□□ -0.34
TWNK-202ENST00000370228 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.9□□□□□ -0.34
TWNK-202ENST00000370228 GLI3P10071 1580 aa12.9□□□□□ -0.34
TWNK-202ENST00000370228 EXOSC9Q06265 439 aaKnown RBP12.89□□□□□ -0.35
TWNK-202ENST00000370228 BARGINQ6ZT62 677 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 MPHOSPH10O00566 681 aaKnown RBP12.89□□□□□ -0.35
TWNK-202ENST00000370228 ZC3H12AQ5D1E8 599 aaKnown RBP12.89□□□□□ -0.35
TWNK-202ENST00000370228 SWT1Q5T5J6 900 aaKnown RBP12.89□□□□□ -0.35
TWNK-202ENST00000370228 CC2D2BQ6DHV5 1058 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 SMC5Q8IY18 1101 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 LCMT1Q9UIC8 334 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 MRVI1Q9Y6F6 885 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 ATRNO75882 1429 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 DEFB132Q7Z7B7 95 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 GOLGA6L1Q8N7Z2 621 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 DCAF5Q96JK2 942 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 DEF6Q9H4E7 631 aa12.89□□□□□ -0.35
TWNK-202ENST00000370228 THRAP3Q9Y2W1 955 aaKnown RBP12.89□□□□□ -0.35
TWNK-202ENST00000370228 KDM6AO15550 1401 aaPredicted RBP12.88□□□□□ -0.35
TWNK-202ENST00000370228 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
TWNK-202ENST00000370228 A0A1B0GUL7 405 aa12.88□□□□□ -0.35
TWNK-202ENST00000370228 PPP2R5AQ15172 486 aa12.88□□□□□ -0.35
TWNK-202ENST00000370228 CAVIN1Q6NZI2 390 aaKnown RBP12.88□□□□□ -0.35
TWNK-202ENST00000370228 CLEC17AQ6ZS10 378 aa12.88□□□□□ -0.35
TWNK-202ENST00000370228 ST7Q9NRC1 585 aa12.88□□□□□ -0.35
TWNK-202ENST00000370228 KIF3CO14782 793 aa12.87□□□□□ -0.35
TWNK-202ENST00000370228 CALRP27797 417 aaKnown RBP12.87□□□□□ -0.35
TWNK-202ENST00000370228 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
TWNK-202ENST00000370228 SLC52A2Q9HAB3 445 aa12.87□□□□□ -0.35
TWNK-202ENST00000370228 RGS12O14924 1447 aa12.87□□□□□ -0.35
TWNK-202ENST00000370228 ATP6V1AP38606 617 aa12.87□□□□□ -0.35
TWNK-202ENST00000370228 MAP9Q49MG5 647 aa12.87□□□□□ -0.35
TWNK-202ENST00000370228 CASC1Q6TDU7 716 aa12.87□□□□□ -0.35
TWNK-202ENST00000370228 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
TWNK-202ENST00000370228 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
TWNK-202ENST00000370228 TAF7Q15545 349 aaPredicted RBP12.86□□□□□ -0.35
TWNK-202ENST00000370228 RPAINQ86UA6 219 aa12.86□□□□□ -0.35
TWNK-202ENST00000370228 RGPD1P0DJD0 1748 aa12.86□□□□□ -0.35
TWNK-202ENST00000370228 KCNA4P22459 653 aa12.86□□□□□ -0.35
TWNK-202ENST00000370228 DDX19BQ9UMR2 479 aa12.86□□□□□ -0.35
TWNK-202ENST00000370228 NRAPQ86VF7 1730 aa12.86□□□□□ -0.35
TWNK-202ENST00000370228 TRDNQ13061 729 aa12.85□□□□□ -0.35
TWNK-202ENST00000370228 APBA3O96018 575 aa12.85□□□□□ -0.35
TWNK-202ENST00000370228 MYL6BP14649 208 aa12.85□□□□□ -0.35
TWNK-202ENST00000370228 E2F4Q16254 413 aa12.85□□□□□ -0.35
TWNK-202ENST00000370228 TTC31Q49AM3 519 aaPredicted RBP12.85□□□□□ -0.35
TWNK-202ENST00000370228 KIF1BPQ96EK5 621 aa12.85□□□□□ -0.35
TWNK-202ENST00000370228 DISP2A7MBM2 1401 aa12.85□□□□□ -0.35
TWNK-202ENST00000370228 ZNF790Q6PG37 636 aa12.85□□□□□ -0.35
TWNK-202ENST00000370228 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
TWNK-202ENST00000370228 EN1Q05925 392 aaPredicted RBP12.84□□□□□ -0.35
TWNK-202ENST00000370228 INHBEP58166 350 aa12.84□□□□□ -0.35
TWNK-202ENST00000370228 USP16Q9Y5T5 823 aa12.84□□□□□ -0.35
TWNK-202ENST00000370228 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.35
TWNK-202ENST00000370228 AIMP1Q12904 312 aaKnown RBP12.83□□□□□ -0.35
TWNK-202ENST00000370228 KRBA2Q6ZNG9 492 aa12.83□□□□□ -0.35
TWNK-202ENST00000370228 TXLNBQ8N3L3 684 aa12.83□□□□□ -0.35
TWNK-202ENST00000370228 IPO8O15397 1037 aaKnown RBP12.83□□□□□ -0.36
TWNK-202ENST00000370228 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
TWNK-202ENST00000370228 SRLQ86TD4 932 aa12.83□□□□□ -0.36
TWNK-202ENST00000370228 CDCA7Q9BWT1 371 aaPredicted RBP12.83□□□□□ -0.36
TWNK-202ENST00000370228 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
TWNK-202ENST00000370228 TNS2Q63HR2 1409 aa12.83□□□□□ -0.36
TWNK-202ENST00000370228 MAP2K2P36507 400 aa12.83□□□□□ -0.36
TWNK-202ENST00000370228 SUGP1Q8IWZ8 645 aaKnown RBP12.83□□□□□ -0.36
TWNK-202ENST00000370228 DLG5Q8TDM6 1919 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
TWNK-202ENST00000370228 BAG4O95429 457 aaKnown RBP12.82□□□□□ -0.36
TWNK-202ENST00000370228 CCDC96Q2M329 555 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 NBPF3Q9H094 633 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
TWNK-202ENST00000370228 RPS6KL1Q9Y6S9 549 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 A1BGP04217 495 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 MTA1Q13330 715 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 NEK11Q8NG66 645 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 SLC4A9Q96Q91 983 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 FOXD4L1Q9NU39 408 aa12.82□□□□□ -0.36
TWNK-202ENST00000370228 GNAI1P63096 354 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 CCDC27Q2M243 656 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 DNAJC10Q8IXB1 793 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 ANKRD20A12PQ8NF67 263 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 ZNF397Q8NF99 534 aaPredicted RBP12.81□□□□□ -0.36
TWNK-202ENST00000370228 FAM210AQ96ND0 272 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 LNPKQ9C0E8 428 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 CWC22Q9HCG8 908 aaKnown RBP12.81□□□□□ -0.36
TWNK-202ENST00000370228 SSFA2P28290 1259 aa12.81□□□□□ -0.36
TWNK-202ENST00000370228 BMS1Q14692 1282 aaKnown RBP12.81□□□□□ -0.36
TWNK-202ENST00000370228 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms