RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 NMIQ13287 307 aaPredicted RBP6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 TPD52L1Q16890 204 aaPredicted RBP6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 KLHL40Q2TBA0 621 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 TNNI3KQ59H18 835 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 PANK2Q9BZ23 570 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 ZNF287Q9HBT7 754 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 STAP2Q9UGK3 403 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 FPGT-TNNI3KV9GXZ4 949 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 SLIT1O75093 1534 aa6.25□□□□□ -1.41
SMNDC1-202ENST00000369603 SGSM2O43147 1006 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 A1BGP04217 495 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 ME1P48163 572 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 RAB3GAP1Q15042 981 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 ANKRD20A12PQ8NF67 263 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 AK7Q96M32 723 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 NYXQ9GZU5 481 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 SNRKQ9NRH2 765 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 CD163L1Q9NR16 1453 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 IFT172Q9UG01 1749 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 TPM1P09493 284 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 VPS53Q5VIR6 699 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 RNF214Q8ND24 703 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 NCOA7Q8NI08 942 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 ACSBG1Q96GR2 724 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 TNMDQ9H2S6 317 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 NIP7Q9Y221 180 aaKnown RBP eCLIP6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 USP16Q9Y5T5 823 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC171Q6TFL3 1326 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 TNS3Q68CZ2 1445 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 C1orf167Q5SNV9 1468 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 MYOM1P52179 1685 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 KIF20BQ96Q89 1820 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 FER1L4A9Z1Z3 1794 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 RNF113AO15541 343 aaKnown RBP6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 GSPT1P15170 499 aaKnown RBP6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 GJB2P29033 226 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 BRINP3Q76B58 766 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 C8orf37Q96NL8 207 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 HELLSQ9NRZ9 838 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 ARHGAP23Q9P227 1491 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 SH3TC1Q8TE82 1336 aa6.24□□□□□ -1.41
SMNDC1-202ENST00000369603 CLCN1P35523 988 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 TCIRG1Q13488 830 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 OLFM4Q6UX06 510 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 NBPF5PQ86XG9 351 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 DDX11Q96FC9 970 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 NLRP3Q96P20 1036 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 SETDB2Q96T68 719 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 NUP62CLQ9H1M0 184 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 RRAGDQ9NQL2 400 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 FBXO3Q9UK99 471 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 MCM5P33992 734 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 RFC4P35249 363 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 CREB3L3Q68CJ9 461 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 SPTY2D1Q68D10 685 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 DNAJC10Q8IXB1 793 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 RPGRQ92834 1020 aaKnown RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 MAP7D2Q96T17 732 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 ZMYND15Q9H091 742 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 PDE8AO60658 829 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 DHX8Q14562 1220 aaKnown RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC183Q5T5S1 534 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 SLF2Q8IX21 1173 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 SIRT2Q8IXJ6 389 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 NUP133Q8WUM0 1156 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 ANKIB1Q9P2G1 1089 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 NOL7Q9UMY1 257 aaKnown RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 COL3A1P02461 1466 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 CRB1P82279 1406 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 RIMS1Q86UR5 1692 aaKnown RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 LDHCP07864 332 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 ZSCAN22P10073 491 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 ATP5JP18859 108 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 CEBPZQ03701 1054 aaKnown RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 IQCA1Q86XH1 822 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 DZIP1Q86YF9 867 aaKnown RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 C8orf76Q96K31 380 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 ZSCAN16Q9H4T2 348 aaPredicted RBP6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 COPRSQ9NQ92 184 aa6.23□□□□□ -1.41
SMNDC1-202ENST00000369603 A0A1B0GUL7 405 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 TXLNAP40222 546 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 TPTE2Q6XPS3 522 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 RUFY3Q7L099 469 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 FERMT3Q86UX7 667 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 FAM89AQ96GI7 184 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 CCDC87Q9NVE4 849 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 SLC12A7Q9Y666 1083 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 NCOA3Q9Y6Q9 1424 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 NRKQ7Z2Y5 1582 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 GOLGA8BA8MQT2 603 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 GNAT2P19087 354 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 PRIM1P49642 420 aaKnown RBP6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 SF3B2Q13435 895 aaKnown RBP6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 MAP3K11Q16584 847 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 TSR1Q2NL82 804 aaKnown RBP6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 CNNM2Q9H8M5 875 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 HSPA4P34932 840 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 AK2P54819 239 aa6.22□□□□□ -1.41
SMNDC1-202ENST00000369603 UBE2HP62256 183 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms