RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CWC25Q9NXE8 425 aaPredicted RBP26.35■■□□□ 1.81
SMNDC1-201ENST00000369592 LRRC37AA6NMS7 1700 aa26.34■■□□□ 1.81
SMNDC1-201ENST00000369592 IRS4O14654 1257 aaPredicted RBP26.34■■□□□ 1.81
SMNDC1-201ENST00000369592 GRAPQ13588 217 aa26.33■■□□□ 1.81
SMNDC1-201ENST00000369592 GRAPLQ8TC17 118 aaPredicted RBP26.33■■□□□ 1.81
SMNDC1-201ENST00000369592 COL4A5P29400 1685 aa26.33■■□□□ 1.81
SMNDC1-201ENST00000369592 POTECB2RU33 542 aa26.32■■□□□ 1.8
SMNDC1-201ENST00000369592 SLFN5Q08AF3 891 aa26.32■■□□□ 1.8
SMNDC1-201ENST00000369592 RTL5Q5HYW3 569 aaPredicted RBP26.32■■□□□ 1.8
SMNDC1-201ENST00000369592 DDX46Q7L014 1031 aaKnown RBP26.32■■□□□ 1.8
SMNDC1-201ENST00000369592 SP8Q8IXZ3 490 aa26.32■■□□□ 1.8
SMNDC1-201ENST00000369592 IARSP41252 1262 aaKnown RBP26.31■■□□□ 1.8
SMNDC1-201ENST00000369592 TRMT2AQ8IZ69 625 aaKnown RBP26.31■■□□□ 1.8
SMNDC1-201ENST00000369592 RRAGCQ9HB90 399 aa26.31■■□□□ 1.8
SMNDC1-201ENST00000369592 CDHR2Q9BYE9 1310 aa26.31■■□□□ 1.8
SMNDC1-201ENST00000369592 NEURL1BA8MQ27 555 aa26.3■■□□□ 1.8
SMNDC1-201ENST00000369592 E9PSI1 815 aa26.3■■□□□ 1.8
SMNDC1-201ENST00000369592 RTFDC1Q9BY42 306 aaPredicted RBP26.3■■□□□ 1.8
SMNDC1-201ENST00000369592 CWF19L2Q2TBE0 894 aaKnown RBP26.29■■□□□ 1.8
SMNDC1-201ENST00000369592 MYH3P11055 1940 aa26.28■■□□□ 1.8
SMNDC1-201ENST00000369592 FZD9O00144 591 aa26.28■■□□□ 1.8
SMNDC1-201ENST00000369592 FSTL1Q12841 308 aa26.28■■□□□ 1.8
SMNDC1-201ENST00000369592 DIEXFQ68CQ4 756 aaKnown RBP26.28■■□□□ 1.8
SMNDC1-201ENST00000369592 TMC4Q7Z404 712 aa26.28■■□□□ 1.8
SMNDC1-201ENST00000369592 DNAAF4Q8WXU2 420 aa26.28■■□□□ 1.8
SMNDC1-201ENST00000369592 CELF1Q92879 486 aaKnown RBP26.28■■□□□ 1.8
SMNDC1-201ENST00000369592 H7C1W4 665 aa26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 PDE8AO60658 829 aa26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 HSP90B1P14625 803 aaKnown RBP26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 NEXNQ0ZGT2 675 aa26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 FKBP5Q13451 457 aaPredicted RBP26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 DPY19L2Q6NUT2 758 aa26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 MIER1Q8N108 512 aa26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 JARID2Q92833 1246 aaPredicted RBP26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 DUOX1Q9NRD9 1551 aa26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 LTBP1Q14766 1721 aa26.27■■□□□ 1.8
SMNDC1-201ENST00000369592 CDCA7LQ96GN5 454 aa26.26■■□□□ 1.79
SMNDC1-201ENST00000369592 VEGFAP15692 232 aaPredicted RBP26.25■■□□□ 1.79
SMNDC1-201ENST00000369592 CASP7P55210 303 aa26.25■■□□□ 1.79
SMNDC1-201ENST00000369592 GCKRQ14397 625 aa26.25■■□□□ 1.79
SMNDC1-201ENST00000369592 LINS1Q8NG48 757 aa26.25■■□□□ 1.79
SMNDC1-201ENST00000369592 L3MBTL3Q96JM7 780 aaPredicted RBP26.25■■□□□ 1.79
SMNDC1-201ENST00000369592 VPS33BQ9H267 617 aa26.25■■□□□ 1.79
SMNDC1-201ENST00000369592 ZNF541Q9H0D2 1346 aa26.24■■□□□ 1.79
SMNDC1-201ENST00000369592 DDNO94850 711 aaPredicted RBP26.24■■□□□ 1.79
SMNDC1-201ENST00000369592 SCN4AP35499 1836 aa26.23■■□□□ 1.79
SMNDC1-201ENST00000369592 RPS8P62241 208 aaKnown RBP26.22■■□□□ 1.79
SMNDC1-201ENST00000369592 BEND3Q5T5X7 828 aa26.22■■□□□ 1.79
SMNDC1-201ENST00000369592 PLA2G12BQ9BX93 195 aa26.22■■□□□ 1.79
SMNDC1-201ENST00000369592 SEC31BQ9NQW1 1179 aa26.22■■□□□ 1.79
SMNDC1-201ENST00000369592 F6X3S4 739 aa26.21■■□□□ 1.79
SMNDC1-201ENST00000369592 MPNDQ8N594 471 aa26.21■■□□□ 1.79
SMNDC1-201ENST00000369592 RTL9Q8NET4 1388 aa26.2■■□□□ 1.79
SMNDC1-201ENST00000369592 CTSWP56202 376 aa26.2■■□□□ 1.78
SMNDC1-201ENST00000369592 CCDC152Q4G0S7 254 aa26.2■■□□□ 1.78
SMNDC1-201ENST00000369592 DPP8Q6V1X1 898 aaPredicted RBP26.2■■□□□ 1.78
SMNDC1-201ENST00000369592 MRPL50Q8N5N7 158 aaKnown RBP26.2■■□□□ 1.78
SMNDC1-201ENST00000369592 TTLL11Q8NHH1 800 aa26.2■■□□□ 1.78
SMNDC1-201ENST00000369592 UBE3BQ7Z3V4 1068 aa26.19■■□□□ 1.78
SMNDC1-201ENST00000369592 SUPT20HQ8NEM7 779 aa26.19■■□□□ 1.78
SMNDC1-201ENST00000369592 TMX4Q9H1E5 349 aaPredicted RBP26.19■■□□□ 1.78
SMNDC1-201ENST00000369592 KIAA2012Q0VF49 1180 aa26.18■■□□□ 1.78
SMNDC1-201ENST00000369592 LARGE2Q8N3Y3 721 aa26.18■■□□□ 1.78
SMNDC1-201ENST00000369592 JDP2Q8WYK2 163 aa26.18■■□□□ 1.78
SMNDC1-201ENST00000369592 PCNTO95613 3336 aa26.17■■□□□ 1.78
SMNDC1-201ENST00000369592 AOC3Q16853 763 aa26.17■■□□□ 1.78
SMNDC1-201ENST00000369592 PPIP5K2O43314 1243 aa26.16■■□□□ 1.78
SMNDC1-201ENST00000369592 GPC2Q8N158 579 aa26.16■■□□□ 1.78
SMNDC1-201ENST00000369592 SMC1BQ8NDV3 1235 aa26.16■■□□□ 1.78
SMNDC1-201ENST00000369592 SSH1Q8WYL5 1049 aa26.16■■□□□ 1.78
SMNDC1-201ENST00000369592 CSF1RP07333 972 aa26.15■■□□□ 1.78
SMNDC1-201ENST00000369592 HSPA1AP0DMV8 641 aaKnown RBP26.15■■□□□ 1.78
SMNDC1-201ENST00000369592 HSPA1BP0DMV9 641 aaKnown RBP26.15■■□□□ 1.78
SMNDC1-201ENST00000369592 GPSM2P81274 684 aa26.15■■□□□ 1.78
SMNDC1-201ENST00000369592 PODXL2Q9NZ53 605 aa26.15■■□□□ 1.78
SMNDC1-201ENST00000369592 POLLQ9UGP5 575 aa26.15■■□□□ 1.78
SMNDC1-201ENST00000369592 GREM2Q9H772 168 aa26.14■■□□□ 1.78
SMNDC1-201ENST00000369592 ADAMTSL1Q8N6G6 1762 aa26.13■■□□□ 1.77
SMNDC1-201ENST00000369592 NIM1KQ8IY84 436 aa26.13■■□□□ 1.77
SMNDC1-201ENST00000369592 CCDC85AQ96PX6 553 aaPredicted RBP26.13■■□□□ 1.77
SMNDC1-201ENST00000369592 ALDH1L1O75891 902 aa26.12■■□□□ 1.77
SMNDC1-201ENST00000369592 CT47B1P0C2W7 299 aaPredicted RBP26.12■■□□□ 1.77
SMNDC1-201ENST00000369592 ALDH1L2Q3SY69 923 aa26.12■■□□□ 1.77
SMNDC1-201ENST00000369592 TAF1DQ9H5J8 278 aaPredicted RBP26.12■■□□□ 1.77
SMNDC1-201ENST00000369592 ZNRF3Q9ULT6 936 aa26.12■■□□□ 1.77
SMNDC1-201ENST00000369592 NSFL1CQ9UNZ2 370 aaKnown RBP26.12■■□□□ 1.77
SMNDC1-201ENST00000369592 IQCA1LA6NCM1 817 aa26.11■■□□□ 1.77
SMNDC1-201ENST00000369592 EIF6P56537 245 aaKnown RBP26.11■■□□□ 1.77
SMNDC1-201ENST00000369592 FOXO4P98177 505 aa26.11■■□□□ 1.77
SMNDC1-201ENST00000369592 TBC1D16Q8TBP0 767 aa26.11■■□□□ 1.77
SMNDC1-201ENST00000369592 PTPRCP08575 1304 aa26.11■■□□□ 1.77
SMNDC1-201ENST00000369592 SPEF2Q9C093 1822 aa26.1■■□□□ 1.77
SMNDC1-201ENST00000369592 ANKRD18AQ8IVF6 992 aa26.1■■□□□ 1.77
SMNDC1-201ENST00000369592 YDJCA8MPS7 323 aa26.09■■□□□ 1.77
SMNDC1-201ENST00000369592 POTEIP0CG38 1075 aa26.09■■□□□ 1.77
SMNDC1-201ENST00000369592 POTEJP0CG39 1038 aa26.09■■□□□ 1.77
SMNDC1-201ENST00000369592 BRPF1P55201 1214 aaPredicted RBP26.09■■□□□ 1.77
SMNDC1-201ENST00000369592 CXCL9Q07325 125 aa26.09■■□□□ 1.77
SMNDC1-201ENST00000369592 CDC5LQ99459 802 aaKnown RBP26.09■■□□□ 1.77
SMNDC1-201ENST00000369592 BSDC1Q9NW68 430 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms