RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 KIAA2012Q0VF49 1180 aa19.16■□□□□ 0.66
CTSD-202ENST00000367196 CNTROBQ8N137 903 aa19.16■□□□□ 0.66
CTSD-202ENST00000367196 ZNRF3Q9ULT6 936 aa19.16■□□□□ 0.66
CTSD-202ENST00000367196 CNTNAP1P78357 1384 aa19.16■□□□□ 0.66
CTSD-202ENST00000367196 ATP5J2-PTCD1G3V325 749 aa19.15■□□□□ 0.66
CTSD-202ENST00000367196 DDX58O95786 925 aaKnown RBP19.15■□□□□ 0.66
CTSD-202ENST00000367196 ITGBL1O95965 494 aaPredicted RBP19.15■□□□□ 0.66
CTSD-202ENST00000367196 SCNN1DP51172 638 aa19.15■□□□□ 0.66
CTSD-202ENST00000367196 SF3B3Q15393 1217 aaKnown RBP19.15■□□□□ 0.66
CTSD-202ENST00000367196 CCDC30Q5VVM6 783 aa19.15■□□□□ 0.66
CTSD-202ENST00000367196 USP50Q70EL3 339 aaPredicted RBP19.15■□□□□ 0.66
CTSD-202ENST00000367196 FAM89AQ96GI7 184 aa19.15■□□□□ 0.66
CTSD-202ENST00000367196 MKRN1Q9UHC7 482 aaKnown RBP19.15■□□□□ 0.66
CTSD-202ENST00000367196 CDHR2Q9BYE9 1310 aa19.15■□□□□ 0.66
CTSD-202ENST00000367196 LTBP1Q14766 1721 aa19.14■□□□□ 0.66
CTSD-202ENST00000367196 HSPA1AP0DMV8 641 aaKnown RBP19.14■□□□□ 0.65
CTSD-202ENST00000367196 HSPA1BP0DMV9 641 aaKnown RBP19.14■□□□□ 0.65
CTSD-202ENST00000367196 ELL2O00472 640 aaPredicted RBP19.13■□□□□ 0.65
CTSD-202ENST00000367196 IRS4O14654 1257 aaPredicted RBP19.13■□□□□ 0.65
CTSD-202ENST00000367196 TNIP1Q15025 636 aa19.13■□□□□ 0.65
CTSD-202ENST00000367196 MAP1SQ66K74 1059 aaPredicted RBP19.13■□□□□ 0.65
CTSD-202ENST00000367196 ZBTB38Q8NAP3 1195 aaPredicted RBP19.13■□□□□ 0.65
CTSD-202ENST00000367196 TAF1P21675 1872 aa19.12■□□□□ 0.65
CTSD-202ENST00000367196 EPS15P42566 896 aa19.12■□□□□ 0.65
CTSD-202ENST00000367196 CCDC27Q2M243 656 aa19.12■□□□□ 0.65
CTSD-202ENST00000367196 CIAPIN1Q6FI81 312 aa19.12■□□□□ 0.65
CTSD-202ENST00000367196 SLC51AQ86UW1 340 aa19.12■□□□□ 0.65
CTSD-202ENST00000367196 CCDC191Q8NCU4 936 aa19.12■□□□□ 0.65
CTSD-202ENST00000367196 ADARB2Q9NS39 739 aaKnown RBP19.12■□□□□ 0.65
CTSD-202ENST00000367196 GPRC5DQ9NZD1 345 aa19.12■□□□□ 0.65
CTSD-202ENST00000367196 BCL2L13Q9BXK5 485 aa19.11■□□□□ 0.65
CTSD-202ENST00000367196 PHAXQ9H814 394 aaKnown RBP19.11■□□□□ 0.65
CTSD-202ENST00000367196 DUOX1Q9NRD9 1551 aa19.1■□□□□ 0.65
CTSD-202ENST00000367196 CXCL9Q07325 125 aa19.1■□□□□ 0.65
CTSD-202ENST00000367196 EYA3Q99504 573 aa19.1■□□□□ 0.65
CTSD-202ENST00000367196 MYD88Q99836 296 aa19.1■□□□□ 0.65
CTSD-202ENST00000367196 STK31Q9BXU1 1019 aa19.1■□□□□ 0.65
CTSD-202ENST00000367196 WASHC4Q2M389 1173 aa19.09■□□□□ 0.65
CTSD-202ENST00000367196 CCDC152Q4G0S7 254 aa19.09■□□□□ 0.65
CTSD-202ENST00000367196 NCBP3Q53F19 620 aaKnown RBP19.09■□□□□ 0.65
CTSD-202ENST00000367196 RTL5Q5HYW3 569 aaPredicted RBP19.09■□□□□ 0.65
CTSD-202ENST00000367196 C8orf58Q8NAV2 365 aa19.09■□□□□ 0.65
CTSD-202ENST00000367196 CELF1Q92879 486 aaKnown RBP19.09■□□□□ 0.65
CTSD-202ENST00000367196 ZNF428Q96B54 188 aa19.09■□□□□ 0.65
CTSD-202ENST00000367196 CWC25Q9NXE8 425 aaPredicted RBP19.09■□□□□ 0.65
CTSD-202ENST00000367196 NSFL1CQ9UNZ2 370 aaKnown RBP19.09■□□□□ 0.65
CTSD-202ENST00000367196 TRPM7Q96QT4 1865 aa19.08■□□□□ 0.65
CTSD-202ENST00000367196 PCCAP05165 728 aaPredicted RBP19.08■□□□□ 0.64
CTSD-202ENST00000367196 GMPSP49915 693 aaPredicted RBP19.08■□□□□ 0.64
CTSD-202ENST00000367196 COL13A1Q5TAT6 717 aaPredicted RBP19.08■□□□□ 0.64
CTSD-202ENST00000367196 ABT1Q9ULW3 272 aaKnown RBP19.08■□□□□ 0.64
CTSD-202ENST00000367196 IL16Q14005 1332 aa19.07■□□□□ 0.64
CTSD-202ENST00000367196 RASSF10A6NK89 507 aa19.07■□□□□ 0.64
CTSD-202ENST00000367196 C6orf229H3BNL8 230 aa19.07■□□□□ 0.64
CTSD-202ENST00000367196 ANP32CO43423 234 aa19.07■□□□□ 0.64
CTSD-202ENST00000367196 RPS8P62241 208 aaKnown RBP19.07■□□□□ 0.64
CTSD-202ENST00000367196 NEXNQ0ZGT2 675 aa19.07■□□□□ 0.64
CTSD-202ENST00000367196 AIDAQ96BJ3 306 aa19.07■□□□□ 0.64
CTSD-202ENST00000367196 METTL22Q9BUU2 404 aaPredicted RBP19.07■□□□□ 0.64
CTSD-202ENST00000367196 PDE8AO60658 829 aa19.06■□□□□ 0.64
CTSD-202ENST00000367196 RAD17O75943 681 aa19.06■□□□□ 0.64
CTSD-202ENST00000367196 VEGFBP49765 207 aa19.06■□□□□ 0.64
CTSD-202ENST00000367196 DEFB115Q30KQ5 88 aa19.06■□□□□ 0.64
CTSD-202ENST00000367196 WWC1Q8IX03 1113 aa19.06■□□□□ 0.64
CTSD-202ENST00000367196 H7C1D1 291 aa19.05■□□□□ 0.64
CTSD-202ENST00000367196 KSR2Q6VAB6 950 aa19.05■□□□□ 0.64
CTSD-202ENST00000367196 TNS4Q8IZW8 715 aa19.05■□□□□ 0.64
CTSD-202ENST00000367196 ZC3H15Q8WU90 426 aaKnown RBP19.05■□□□□ 0.64
CTSD-202ENST00000367196 MRS2Q9HD23 443 aa19.05■□□□□ 0.64
CTSD-202ENST00000367196 MAP3K2Q9Y2U5 619 aa19.05■□□□□ 0.64
CTSD-202ENST00000367196 GPSM2P81274 684 aa19.04■□□□□ 0.64
CTSD-202ENST00000367196 TWISTNBQ3B726 338 aaPredicted RBP19.04■□□□□ 0.64
CTSD-202ENST00000367196 TSR2Q969E8 191 aaKnown RBP19.04■□□□□ 0.64
CTSD-202ENST00000367196 YDJCA8MPS7 323 aa19.03■□□□□ 0.64
CTSD-202ENST00000367196 RPS12P25398 132 aaKnown RBP19.03■□□□□ 0.64
CTSD-202ENST00000367196 TSPYL6Q8N831 410 aa19.03■□□□□ 0.64
CTSD-202ENST00000367196 DPF2Q92785 391 aa19.03■□□□□ 0.64
CTSD-202ENST00000367196 PODXL2Q9NZ53 605 aa19.03■□□□□ 0.64
CTSD-202ENST00000367196 ANKIB1Q9P2G1 1089 aa19.03■□□□□ 0.64
CTSD-202ENST00000367196 MYH3P11055 1940 aa19.03■□□□□ 0.64
CTSD-202ENST00000367196 CACNA1FO60840 1977 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 PI4KAP2A4QPH2 592 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 G3V3G9 751 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 RIMBP2O15034 1052 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 ECE1P42892 770 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 CCDC184Q52MB2 194 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 DCAF8Q5TAQ9 597 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 ANKRD18AQ8IVF6 992 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 PI4KAP1Q8N8J0 262 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 TBC1D16Q8TBP0 767 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 CDC5LQ99459 802 aaKnown RBP19.02■□□□□ 0.64
CTSD-202ENST00000367196 ZC3H12CQ9C0D7 883 aaKnown RBP19.02■□□□□ 0.64
CTSD-202ENST00000367196 DBNDD1Q9H9R9 158 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 POLLQ9UGP5 575 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 CNOT7Q9UIV1 285 aaKnown RBP19.02■□□□□ 0.64
CTSD-202ENST00000367196 GGA1Q9UJY5 639 aa19.02■□□□□ 0.64
CTSD-202ENST00000367196 ZNF316A6NFI3 1004 aaPredicted RBP19.01■□□□□ 0.63
CTSD-202ENST00000367196 ECE2O60344 883 aa19.01■□□□□ 0.63
CTSD-202ENST00000367196 CTCFP49711 727 aaPredicted RBP19.01■□□□□ 0.63
CTSD-202ENST00000367196 MAP2K1Q02750 393 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms