RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
TNFRSF1A-202ENST00000366159 IRS4O14654 1257 aaPredicted RBP17.64■□□□□ 0.41
TNFRSF1A-202ENST00000366159 TMC4Q7Z404 712 aa17.64■□□□□ 0.41
TNFRSF1A-202ENST00000366159 LARGE2Q8N3Y3 721 aa17.64■□□□□ 0.41
TNFRSF1A-202ENST00000366159 JMYQ8N9B5 988 aa17.64■□□□□ 0.41
TNFRSF1A-202ENST00000366159 CCDC191Q8NCU4 936 aa17.64■□□□□ 0.41
TNFRSF1A-202ENST00000366159 MYD88Q99836 296 aa17.64■□□□□ 0.41
TNFRSF1A-202ENST00000366159 DUOX1Q9NRD9 1551 aa17.64■□□□□ 0.41
TNFRSF1A-202ENST00000366159 LTBP1Q14766 1721 aa17.63■□□□□ 0.41
TNFRSF1A-202ENST00000366159 TWISTNBQ3B726 338 aaPredicted RBP17.63■□□□□ 0.41
TNFRSF1A-202ENST00000366159 LDHDQ86WU2 507 aa17.63■□□□□ 0.41
TNFRSF1A-202ENST00000366159 WDR63Q8IWG1 891 aa17.63■□□□□ 0.41
TNFRSF1A-202ENST00000366159 MPNDQ8N594 471 aa17.63■□□□□ 0.41
TNFRSF1A-202ENST00000366159 SUPT20HQ8NEM7 779 aa17.63■□□□□ 0.41
TNFRSF1A-202ENST00000366159 CELF1Q92879 486 aaKnown RBP17.63■□□□□ 0.41
TNFRSF1A-202ENST00000366159 HACL1Q9UJ83 578 aa17.63■□□□□ 0.41
TNFRSF1A-202ENST00000366159 PASKQ96RG2 1323 aa17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 PPIP5K2O43314 1243 aa17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 DDX58O95786 925 aaKnown RBP17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 PCCAP05165 728 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 EPHX2P34913 555 aa17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 EIF6P56537 245 aaKnown RBP17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 KIAA2012Q0VF49 1180 aa17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 AOC3Q16853 763 aa17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 RTL5Q5HYW3 569 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 DPP8Q6V1X1 898 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 KSR2Q6VAB6 950 aa17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 TMX4Q9H1E5 349 aaPredicted RBP17.62■□□□□ 0.41
TNFRSF1A-202ENST00000366159 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
TNFRSF1A-202ENST00000366159 PI4KAP2A4QPH2 592 aa17.61■□□□□ 0.41
TNFRSF1A-202ENST00000366159 ITGBL1O95965 494 aaPredicted RBP17.61■□□□□ 0.41
TNFRSF1A-202ENST00000366159 IGKV5-2P06315 115 aa17.61■□□□□ 0.41
TNFRSF1A-202ENST00000366159 SCNN1DP51172 638 aa17.61■□□□□ 0.41
TNFRSF1A-202ENST00000366159 G2E3Q7L622 706 aa17.61■□□□□ 0.41
TNFRSF1A-202ENST00000366159 PI4KAP1Q8N8J0 262 aa17.61■□□□□ 0.41
TNFRSF1A-202ENST00000366159 MAP3K2Q9Y2U5 619 aa17.61■□□□□ 0.41
TNFRSF1A-202ENST00000366159 VAMP4O75379 141 aa17.6■□□□□ 0.41
TNFRSF1A-202ENST00000366159 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
TNFRSF1A-202ENST00000366159 PNMA8AQ86V59 439 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1A-202ENST00000366159 NIM1KQ8IY84 436 aa17.6■□□□□ 0.41
TNFRSF1A-202ENST00000366159 CWC25Q9NXE8 425 aaPredicted RBP17.6■□□□□ 0.41
TNFRSF1A-202ENST00000366159 ZNRF3Q9ULT6 936 aa17.6■□□□□ 0.41
TNFRSF1A-202ENST00000366159 SLC4A2P04920 1241 aa17.59■□□□□ 0.41
TNFRSF1A-202ENST00000366159 CXCL9Q07325 125 aa17.59■□□□□ 0.41
TNFRSF1A-202ENST00000366159 STK31Q9BXU1 1019 aa17.59■□□□□ 0.41
TNFRSF1A-202ENST00000366159 SPINK5Q9NQ38 1064 aaPredicted RBP17.59■□□□□ 0.41
TNFRSF1A-202ENST00000366159 GJA3Q9Y6H8 435 aa17.59■□□□□ 0.41
TNFRSF1A-202ENST00000366159 CDHR2Q9BYE9 1310 aa17.58■□□□□ 0.41
TNFRSF1A-202ENST00000366159 PDE8AO60658 829 aa17.58■□□□□ 0.4
TNFRSF1A-202ENST00000366159 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
TNFRSF1A-202ENST00000366159 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
TNFRSF1A-202ENST00000366159 EPS15P42566 896 aa17.57■□□□□ 0.4
TNFRSF1A-202ENST00000366159 JARID2Q92833 1246 aaPredicted RBP17.57■□□□□ 0.4
TNFRSF1A-202ENST00000366159 SEC31BQ9NQW1 1179 aa17.57■□□□□ 0.4
TNFRSF1A-202ENST00000366159 CREBZFQ9NS37 354 aa17.57■□□□□ 0.4
TNFRSF1A-202ENST00000366159 YDJCA8MPS7 323 aa17.56■□□□□ 0.4
TNFRSF1A-202ENST00000366159 GPSM2P81274 684 aa17.56■□□□□ 0.4
TNFRSF1A-202ENST00000366159 EAPPQ56P03 285 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-202ENST00000366159 POLLQ9UGP5 575 aa17.56■□□□□ 0.4
TNFRSF1A-202ENST00000366159 SALL2Q9Y467 1007 aaPredicted RBP17.56■□□□□ 0.4
TNFRSF1A-202ENST00000366159 CACNA1FO60840 1977 aa17.56■□□□□ 0.4
TNFRSF1A-202ENST00000366159 NEURL1BA8MQ27 555 aa17.55■□□□□ 0.4
TNFRSF1A-202ENST00000366159 EXOSC9Q06265 439 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-202ENST00000366159 FAM9BQ8IZU0 186 aa17.55■□□□□ 0.4
TNFRSF1A-202ENST00000366159 PODXL2Q9NZ53 605 aa17.55■□□□□ 0.4
TNFRSF1A-202ENST00000366159 GPRC5DQ9NZD1 345 aa17.55■□□□□ 0.4
TNFRSF1A-202ENST00000366159 NSFL1CQ9UNZ2 370 aaKnown RBP17.55■□□□□ 0.4
TNFRSF1A-202ENST00000366159 ZNF521Q96K83 1311 aa17.55■□□□□ 0.4
TNFRSF1A-202ENST00000366159 H7C1W4 665 aa17.54■□□□□ 0.4
TNFRSF1A-202ENST00000366159 FLIIQ13045 1269 aa17.54■□□□□ 0.4
TNFRSF1A-202ENST00000366159 CWF19L2Q2TBE0 894 aaKnown RBP17.54■□□□□ 0.4
TNFRSF1A-202ENST00000366159 CCDC152Q4G0S7 254 aa17.54■□□□□ 0.4
TNFRSF1A-202ENST00000366159 LMOD1P29536 600 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 WASHC4Q2M389 1173 aa17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 MAP1SQ66K74 1059 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 CIAPIN1Q6FI81 312 aa17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 USP50Q70EL3 339 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 CNTROBQ8N137 903 aa17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 TTLL11Q8NHH1 800 aa17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 CLEC11AQ9Y240 323 aa17.53■□□□□ 0.4
TNFRSF1A-202ENST00000366159 NEXNQ0ZGT2 675 aa17.52■□□□□ 0.4
TNFRSF1A-202ENST00000366159 RTL9Q8NET4 1388 aa17.52■□□□□ 0.39
TNFRSF1A-202ENST00000366159 RAD17O75943 681 aa17.51■□□□□ 0.39
TNFRSF1A-202ENST00000366159 GMPSP49915 693 aaPredicted RBP17.51■□□□□ 0.39
TNFRSF1A-202ENST00000366159 CASP7P55210 303 aa17.51■□□□□ 0.39
TNFRSF1A-202ENST00000366159 CTSWP56202 376 aa17.51■□□□□ 0.39
TNFRSF1A-202ENST00000366159 GCKRQ14397 625 aa17.51■□□□□ 0.39
TNFRSF1A-202ENST00000366159 TNIP1Q15025 636 aa17.51■□□□□ 0.39
TNFRSF1A-202ENST00000366159 ADARB2Q9NS39 739 aaKnown RBP17.51■□□□□ 0.39
TNFRSF1A-202ENST00000366159 DNAAF4Q8WXU2 420 aa17.5■□□□□ 0.39
TNFRSF1A-202ENST00000366159 PLA2G12BQ9BX93 195 aa17.5■□□□□ 0.39
TNFRSF1A-202ENST00000366159 PGAP2Q9UHJ9 254 aa17.5■□□□□ 0.39
TNFRSF1A-202ENST00000366159 MYH3P11055 1940 aa17.5■□□□□ 0.39
TNFRSF1A-202ENST00000366159 TMEM88BA6NKF7 163 aa17.49■□□□□ 0.39
TNFRSF1A-202ENST00000366159 C6orf229H3BNL8 230 aa17.49■□□□□ 0.39
TNFRSF1A-202ENST00000366159 FKBP5Q13451 457 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-202ENST00000366159 LINS1Q8NG48 757 aa17.49■□□□□ 0.39
TNFRSF1A-202ENST00000366159 CCDC85AQ96PX6 553 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF1A-202ENST00000366159 EYA3Q99504 573 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms