RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 NCLP19338 710 aaKnown RBP6.23□□□□□ -1.41
ATXN3-202ENST00000359366 LMBR1LQ6UX01 489 aa6.23□□□□□ -1.41
ATXN3-202ENST00000359366 FAM89AQ96GI7 184 aa6.23□□□□□ -1.41
ATXN3-202ENST00000359366 IL25Q9H293 177 aa6.23□□□□□ -1.41
ATXN3-202ENST00000359366 WNK3Q9BYP7 1800 aa6.23□□□□□ -1.41
ATXN3-202ENST00000359366 CD2BP2O95400 341 aaKnown RBP6.23□□□□□ -1.41
ATXN3-202ENST00000359366 CYP19A1P11511 503 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-202ENST00000359366 AACSQ86V21 672 aa6.23□□□□□ -1.41
ATXN3-202ENST00000359366 KIF12Q96FN5 646 aa6.23□□□□□ -1.41
ATXN3-202ENST00000359366 TBC1D2Q9BYX2 928 aa6.23□□□□□ -1.41
ATXN3-202ENST00000359366 TTLL13PA6NNM8 815 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 ATP6V1AP38606 617 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 ITPK1Q13572 414 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 MEX3CQ5U5Q3 659 aaKnown RBP6.22□□□□□ -1.41
ATXN3-202ENST00000359366 CERKQ8TCT0 537 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 EAF2Q96CJ1 260 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-202ENST00000359366 KIF1BPQ96EK5 621 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 USP21Q9UK80 565 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 BCL9LQ86UU0 1499 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 UTYO14607 1347 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 SLIT2O94813 1529 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 STARD3NLO95772 234 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 CASP7P55210 303 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 G3BP1Q13283 466 aaKnown RBP eCLIP6.22□□□□□ -1.41
ATXN3-202ENST00000359366 MTX1Q13505 466 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 EDC3Q96F86 508 aaKnown RBP6.22□□□□□ -1.41
ATXN3-202ENST00000359366 KIF2CQ99661 725 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 CWC25Q9NXE8 425 aaPredicted RBP6.22□□□□□ -1.41
ATXN3-202ENST00000359366 TRPC6Q9Y210 931 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 PLEKHG2Q9H7P9 1386 aa6.22□□□□□ -1.41
ATXN3-202ENST00000359366 NUP188Q5SRE5 1749 aa6.21□□□□□ -1.41
ATXN3-202ENST00000359366 RAB11FIP3O75154 756 aa6.21□□□□□ -1.41
ATXN3-202ENST00000359366 FOXO4P98177 505 aa6.21□□□□□ -1.41
ATXN3-202ENST00000359366 PTPN12Q05209 780 aaKnown RBP6.21□□□□□ -1.41
ATXN3-202ENST00000359366 TFCP2Q12800 502 aa6.21□□□□□ -1.41
ATXN3-202ENST00000359366 KIF6Q6ZMV9 814 aa6.21□□□□□ -1.41
ATXN3-202ENST00000359366 PI4K2BQ8TCG2 481 aa6.21□□□□□ -1.41
ATXN3-202ENST00000359366 JCADQ9P266 1359 aa6.21□□□□□ -1.41
ATXN3-202ENST00000359366 LOC102724428A0A0B4J2F2 783 aa6.21□□□□□ -1.42
ATXN3-202ENST00000359366 CHGBP05060 677 aa6.21□□□□□ -1.42
ATXN3-202ENST00000359366 IFIT2P09913 472 aaKnown RBP6.21□□□□□ -1.42
ATXN3-202ENST00000359366 RFX5P48382 616 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-202ENST00000359366 MNX1P50219 401 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-202ENST00000359366 SIK1P57059 783 aa6.21□□□□□ -1.42
ATXN3-202ENST00000359366 CLASRPQ8N2M8 674 aaKnown RBP6.21□□□□□ -1.42
ATXN3-202ENST00000359366 PUS3Q9BZE2 481 aaKnown RBP6.21□□□□□ -1.42
ATXN3-202ENST00000359366 TSPYL2Q9H2G4 693 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-202ENST00000359366 MYH14Q7Z406 1995 aaKnown RBP6.21□□□□□ -1.42
ATXN3-202ENST00000359366 H7C1W4 665 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 PLCG2P16885 1265 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 CRKLP46109 303 aaKnown RBP6.2□□□□□ -1.42
ATXN3-202ENST00000359366 TCIRG1Q13488 830 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 HSP90AA2PQ14568 343 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-202ENST00000359366 LRRC24Q50LG9 513 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 DZIP3Q86Y13 1208 aaKnown RBP6.2□□□□□ -1.42
ATXN3-202ENST00000359366 FAM43AQ8N2R8 423 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 IPO4Q8TEX9 1081 aaKnown RBP6.2□□□□□ -1.42
ATXN3-202ENST00000359366 BOLA2Q9H3K6 86 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 OSBPL3Q9H4L5 887 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.2□□□□□ -1.42
ATXN3-202ENST00000359366 THRAP3Q9Y2W1 955 aaKnown RBP6.2□□□□□ -1.42
ATXN3-202ENST00000359366 TJP1Q07157 1748 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 TUBGCP6Q96RT7 1819 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 AK9Q5TCS8 1911 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 CDK11BP21127 795 aaKnown RBP6.2□□□□□ -1.42
ATXN3-202ENST00000359366 CHMLP26374 656 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 VPS72Q15906 364 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 INTS5Q6P9B9 1019 aaKnown RBP6.2□□□□□ -1.42
ATXN3-202ENST00000359366 USP26Q9BXU7 913 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 ANO2Q9NQ90 1003 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 STAP2Q9UGK3 403 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 ERBB4Q15303 1308 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 MAP3K15Q6ZN16 1313 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 PALLDQ8WX93 1383 aa6.2□□□□□ -1.42
ATXN3-202ENST00000359366 POTEB3A0JP26 581 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 RBM25P49756 843 aaKnown RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 TIMM10P62072 90 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 SLFNL1Q499Z3 407 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 POTEBQ6S5H4 581 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 CWC27Q6UX04 472 aaKnown RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 BARGINQ6ZT62 677 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 ESYT1Q9BSJ8 1104 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 ISCA1Q9BUE6 129 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 PALD1Q9ULE6 856 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 NAP1L2Q9ULW6 460 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 AFF2P51816 1311 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 ERC2O15083 957 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 HCLS1P14317 486 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 BECN1Q14457 450 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 RABL6Q3YEC7 729 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 HSP90AB4PQ58FF6 505 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 NOL8Q76FK4 1167 aaKnown RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 CCDC191Q8NCU4 936 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 NEUROD6Q96NK8 337 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 DBNDD2Q9BQY9 259 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 CDCA7Q9BWT1 371 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 TEX13AQ9BXU3 409 aaPredicted RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 DBNLQ9UJU6 430 aaKnown RBP6.19□□□□□ -1.42
ATXN3-202ENST00000359366 UBN2Q6ZU65 1347 aa6.19□□□□□ -1.42
ATXN3-202ENST00000359366 NWD2Q9ULI1 1742 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms