RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
LINC01560-201ENST00000357412 USP50Q70EL3 339 aaPredicted RBP13.3□□□□□ -0.28
LINC01560-201ENST00000357412 TNS4Q8IZW8 715 aa13.3□□□□□ -0.28
LINC01560-201ENST00000357412 FAM89AQ96GI7 184 aa13.3□□□□□ -0.28
LINC01560-201ENST00000357412 HYPKQ9NX55 129 aa13.3□□□□□ -0.28
LINC01560-201ENST00000357412 RASSF10A6NK89 507 aa13.29□□□□□ -0.28
LINC01560-201ENST00000357412 TRIM28Q13263 835 aaKnown RBP13.29□□□□□ -0.28
LINC01560-201ENST00000357412 IFT57Q9NWB7 429 aa13.29□□□□□ -0.28
LINC01560-201ENST00000357412 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
LINC01560-201ENST00000357412 GPRC5DQ9NZD1 345 aa13.29□□□□□ -0.28
LINC01560-201ENST00000357412 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
LINC01560-201ENST00000357412 FMR1Q06787 632 aaKnown RBP eCLIP13.28□□□□□ -0.28
LINC01560-201ENST00000357412 TMC4Q7Z404 712 aa13.28□□□□□ -0.28
LINC01560-201ENST00000357412 CELF1Q92879 486 aaKnown RBP13.28□□□□□ -0.28
LINC01560-201ENST00000357412 FOXN1O15353 648 aa13.27□□□□□ -0.29
LINC01560-201ENST00000357412 GMPSP49915 693 aaPredicted RBP13.27□□□□□ -0.29
LINC01560-201ENST00000357412 DEFB115Q30KQ5 88 aa13.27□□□□□ -0.29
LINC01560-201ENST00000357412 CIAPIN1Q6FI81 312 aa13.27□□□□□ -0.29
LINC01560-201ENST00000357412 ADARB2Q9NS39 739 aaKnown RBP13.27□□□□□ -0.29
LINC01560-201ENST00000357412 YDJCA8MPS7 323 aa13.26□□□□□ -0.29
LINC01560-201ENST00000357412 TRAF5O00463 557 aa13.26□□□□□ -0.29
LINC01560-201ENST00000357412 ELL2O00472 640 aaPredicted RBP13.26□□□□□ -0.29
LINC01560-201ENST00000357412 IRS4O14654 1257 aaPredicted RBP13.26□□□□□ -0.29
LINC01560-201ENST00000357412 RAD17O75943 681 aa13.26□□□□□ -0.29
LINC01560-201ENST00000357412 GNAI1P63096 354 aa13.26□□□□□ -0.29
LINC01560-201ENST00000357412 CALD1Q05682 793 aaKnown RBP13.26□□□□□ -0.29
LINC01560-201ENST00000357412 RTL5Q5HYW3 569 aaPredicted RBP13.26□□□□□ -0.29
LINC01560-201ENST00000357412 C8orf58Q8NAV2 365 aa13.26□□□□□ -0.29
LINC01560-201ENST00000357412 PHAXQ9H814 394 aaKnown RBP13.26□□□□□ -0.29
LINC01560-201ENST00000357412 WBP1LQ9NX94 342 aa13.26□□□□□ -0.29
LINC01560-201ENST00000357412 HIRAP54198 1017 aaPredicted RBP13.25□□□□□ -0.29
LINC01560-201ENST00000357412 GOLGA2Q08379 1002 aa13.25□□□□□ -0.29
LINC01560-201ENST00000357412 TNIP1Q15025 636 aa13.25□□□□□ -0.29
LINC01560-201ENST00000357412 CST9Q5W186 159 aa13.25□□□□□ -0.29
LINC01560-201ENST00000357412 RIC3Q7Z5B4 369 aa13.25□□□□□ -0.29
LINC01560-201ENST00000357412 ZBTB38Q8NAP3 1195 aaPredicted RBP13.25□□□□□ -0.29
LINC01560-201ENST00000357412 PGAP2Q9UHJ9 254 aa13.25□□□□□ -0.29
LINC01560-201ENST00000357412 ABT1Q9ULW3 272 aaKnown RBP13.25□□□□□ -0.29
LINC01560-201ENST00000357412 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
LINC01560-201ENST00000357412 ARFGEF2Q9Y6D5 1785 aa13.25□□□□□ -0.29
LINC01560-201ENST00000357412 WDR33Q9C0J8 1336 aaKnown RBP13.24□□□□□ -0.29
LINC01560-201ENST00000357412 GPSM2P81274 684 aa13.24□□□□□ -0.29
LINC01560-201ENST00000357412 POLLQ9UGP5 575 aa13.24□□□□□ -0.29
LINC01560-201ENST00000357412 CDHR2Q9BYE9 1310 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 SHTN1A0MZ66 631 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 CAPN15O75808 1086 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 RPS8P62241 208 aaKnown RBP13.23□□□□□ -0.29
LINC01560-201ENST00000357412 WASHC4Q2M389 1173 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 CCDC184Q52MB2 194 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 TRPM4Q8TD43 1214 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 MYD88Q99836 296 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 PRDM10Q9NQV6 1147 aa13.23□□□□□ -0.29
LINC01560-201ENST00000357412 ZBTB12Q9Y330 459 aaPredicted RBP13.23□□□□□ -0.29
LINC01560-201ENST00000357412 CTCFP49711 727 aaPredicted RBP13.22□□□□□ -0.29
LINC01560-201ENST00000357412 TSPYL6Q8N831 410 aa13.22□□□□□ -0.29
LINC01560-201ENST00000357412 CCDC191Q8NCU4 936 aa13.22□□□□□ -0.29
LINC01560-201ENST00000357412 TBC1D16Q8TBP0 767 aa13.22□□□□□ -0.29
LINC01560-201ENST00000357412 ZC3H15Q8WU90 426 aaKnown RBP13.22□□□□□ -0.29
LINC01560-201ENST00000357412 GLIS2Q9BZE0 524 aaPredicted RBP13.22□□□□□ -0.29
LINC01560-201ENST00000357412 DBNDD1Q9H9R9 158 aa13.22□□□□□ -0.29
LINC01560-201ENST00000357412 SEC31BQ9NQW1 1179 aa13.22□□□□□ -0.29
LINC01560-201ENST00000357412 CNOT7Q9UIV1 285 aaKnown RBP13.22□□□□□ -0.29
LINC01560-201ENST00000357412 TLL2Q9Y6L7 1015 aa13.22□□□□□ -0.29
LINC01560-201ENST00000357412 ADAMTSL1Q8N6G6 1762 aa13.22□□□□□ -0.29
LINC01560-201ENST00000357412 C6orf229H3BNL8 230 aa13.21□□□□□ -0.29
LINC01560-201ENST00000357412 PSMD14O00487 310 aa13.21□□□□□ -0.29
LINC01560-201ENST00000357412 RIMBP2O15034 1052 aa13.21□□□□□ -0.29
LINC01560-201ENST00000357412 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.29
LINC01560-201ENST00000357412 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.29
LINC01560-201ENST00000357412 DPF2Q92785 391 aa13.21□□□□□ -0.29
LINC01560-201ENST00000357412 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.29
LINC01560-201ENST00000357412 GPR101Q96P66 508 aaPredicted RBP13.21□□□□□ -0.29
LINC01560-201ENST00000357412 METTL22Q9BUU2 404 aaPredicted RBP13.21□□□□□ -0.29
LINC01560-201ENST00000357412 LTBP1Q14766 1721 aa13.21□□□□□ -0.3
LINC01560-201ENST00000357412 DLG5Q8TDM6 1919 aa13.21□□□□□ -0.3
LINC01560-201ENST00000357412 DICER1Q9UPY3 1922 aaKnown RBP13.2□□□□□ -0.3
LINC01560-201ENST00000357412 H7C1D1 291 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 CELF2O95319 508 aaKnown RBP13.2□□□□□ -0.3
LINC01560-201ENST00000357412 LBX1P52954 281 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 MAP2K1Q02750 393 aaPredicted RBP13.2□□□□□ -0.3
LINC01560-201ENST00000357412 DOK7Q18PE1 504 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 CYP4F22Q6NT55 531 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 SAPCD2Q86UD0 394 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 MICALL2Q8IY33 904 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 CAPNS2Q96L46 248 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 EYA3Q99504 573 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 KCNQ5Q9NR82 932 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 CWC25Q9NXE8 425 aaPredicted RBP13.2□□□□□ -0.3
LINC01560-201ENST00000357412 PODXL2Q9NZ53 605 aa13.2□□□□□ -0.3
LINC01560-201ENST00000357412 SCN4AP35499 1836 aa13.19□□□□□ -0.3
LINC01560-201ENST00000357412 PDE8AO60658 829 aa13.19□□□□□ -0.3
LINC01560-201ENST00000357412 DDX58O95786 925 aaKnown RBP13.19□□□□□ -0.3
LINC01560-201ENST00000357412 HSPA8P11142 646 aaKnown RBP13.19□□□□□ -0.3
LINC01560-201ENST00000357412 HSP90B1P14625 803 aaKnown RBP13.19□□□□□ -0.3
LINC01560-201ENST00000357412 ECE1P42892 770 aa13.19□□□□□ -0.3
LINC01560-201ENST00000357412 CCDC27Q2M243 656 aa13.19□□□□□ -0.3
LINC01560-201ENST00000357412 PAXIP1Q6ZW49 1069 aaPredicted RBP13.19□□□□□ -0.3
LINC01560-201ENST00000357412 CDC37L1Q7L3B6 337 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms