RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 ROBO2Q9HCK4 1378 aa11.37□□□□□ -0.59
GABPA-201ENST00000354828 ITGA6P23229 1130 aa11.37□□□□□ -0.59
GABPA-201ENST00000354828 NLRP5P59047 1200 aa11.37□□□□□ -0.59
GABPA-201ENST00000354828 NLGN1Q8N2Q7 840 aa11.37□□□□□ -0.59
GABPA-201ENST00000354828 CCDC194A0A1B0GVG4 234 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 PDE8AO60658 829 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 ZFYP08048 801 aaPredicted RBP11.36□□□□□ -0.59
GABPA-201ENST00000354828 PHKG2P15735 406 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 HOMER1Q86YM7 354 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 SBNO2Q9Y2G9 1366 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 MAGEB6P1A0A0J9YX57 407 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 BRPF1P55201 1214 aaPredicted RBP11.36□□□□□ -0.59
GABPA-201ENST00000354828 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 PPP4R3BQ5MIZ7 849 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 C2CD5Q86YS7 1000 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 PDILTQ8N807 584 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 CCDC191Q8NCU4 936 aa11.36□□□□□ -0.59
GABPA-201ENST00000354828 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
GABPA-201ENST00000354828 LOC102724428A0A0B4J2F2 783 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 SIK1P57059 783 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 MYOM2P54296 1465 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 HIBADHP31937 336 aaKnown RBP11.35□□□□□ -0.59
GABPA-201ENST00000354828 PRKG1Q13976 671 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 CCDC144CPQ8IYA2 1237 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 TANGO6Q9C0B7 1094 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 MCM9Q9NXL9 1143 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 MPNDQ8N594 471 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 MIGA1Q8NAN2 632 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 METTL22Q9BUU2 404 aaPredicted RBP11.35□□□□□ -0.59
GABPA-201ENST00000354828 PLA2R1Q13018 1463 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 KRT85P78386 507 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 SSRP1Q08945 709 aaKnown RBP11.35□□□□□ -0.59
GABPA-201ENST00000354828 CCDC12Q8WUD4 166 aaPredicted RBP11.35□□□□□ -0.59
GABPA-201ENST00000354828 A2ML1A8K2U0 1454 aa11.35□□□□□ -0.59
GABPA-201ENST00000354828 VAMP4O75379 141 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 DHX8Q14562 1220 aaKnown RBP11.34□□□□□ -0.59
GABPA-201ENST00000354828 TET3O43151 1660 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 WDR33Q9C0J8 1336 aaKnown RBP11.34□□□□□ -0.59
GABPA-201ENST00000354828 FILIP1LQ4L180 1135 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 CEP131Q9UPN4 1083 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 CDC42BPBQ9Y5S2 1711 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 H7C1D1 291 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 NCOA7Q8NI08 942 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 BICC1Q9H694 974 aaKnown RBP11.34□□□□□ -0.59
GABPA-201ENST00000354828 BABAM1Q9NWV8 329 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 SAMM50Q9Y512 469 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 MICU3Q86XE3 530 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 CCDC83Q8IWF9 413 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 DENND2AQ9ULE3 1009 aa11.34□□□□□ -0.59
GABPA-201ENST00000354828 TFCP2Q12800 502 aa11.33□□□□□ -0.59
GABPA-201ENST00000354828 CCDC70Q6NSX1 233 aa11.33□□□□□ -0.59
GABPA-201ENST00000354828 RAB34Q9BZG1 259 aa11.33□□□□□ -0.59
GABPA-201ENST00000354828 CCT2P78371 535 aaKnown RBP11.33□□□□□ -0.6
GABPA-201ENST00000354828 ARHGEF25Q86VW2 580 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 MAGEB6Q8N7X4 407 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 ESR2Q92731 530 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 PICK1Q9NRD5 415 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 NPC1L1Q9UHC9 1359 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 SOS1Q07889 1333 aaPredicted RBP11.33□□□□□ -0.6
GABPA-201ENST00000354828 K7ELQ4 463 aaPredicted RBP11.33□□□□□ -0.6
GABPA-201ENST00000354828 TMEM266Q2M3C6 531 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 BAG4O95429 457 aaKnown RBP11.33□□□□□ -0.6
GABPA-201ENST00000354828 LIG1P18858 919 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 CCDC178Q5BJE1 867 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 C8orf76Q96K31 380 aa11.33□□□□□ -0.6
GABPA-201ENST00000354828 PRPF40AO75400 957 aaKnown RBP11.32□□□□□ -0.6
GABPA-201ENST00000354828 RBM6P78332 1123 aaKnown RBP11.32□□□□□ -0.6
GABPA-201ENST00000354828 TRAF1Q13077 416 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 USPL1Q5W0Q7 1092 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 CEP57L1Q8IYX8 460 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 RAB11FIP4Q86YS3 637 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 PAG1Q9NWQ8 432 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 CFAP45Q9UL16 551 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 HOXB7P09629 217 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 KCNQ4P56696 695 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 TEX11Q8IYF3 940 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 CNKSR1Q969H4 720 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 GUCY1B3Q02153 619 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 TTC6Q86TZ1 520 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 KRT23Q9C075 422 aa11.32□□□□□ -0.6
GABPA-201ENST00000354828 TRIM21P19474 475 aaKnown RBP11.31□□□□□ -0.6
GABPA-201ENST00000354828 WTAPQ15007 396 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 TAF5LO75529 589 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 FAM135BQ49AJ0 1406 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 IARSP41252 1262 aaKnown RBP11.31□□□□□ -0.6
GABPA-201ENST00000354828 IFIT1BQ5T764 474 aaKnown RBP11.31□□□□□ -0.6
GABPA-201ENST00000354828 G2E3Q7L622 706 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 FERMT3Q86UX7 667 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 ZNF526Q8TF50 670 aaPredicted RBP11.31□□□□□ -0.6
GABPA-201ENST00000354828 ASAP1Q9ULH1 1129 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 USP16Q9Y5T5 823 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 KDM5CP41229 1560 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 MAST3O60307 1309 aa11.31□□□□□ -0.6
GABPA-201ENST00000354828 B4DLN1 442 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 EYA2O00167 538 aa11.3□□□□□ -0.6
GABPA-201ENST00000354828 DEKP35659 375 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms