RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 PSME4Q14997 1843 aa25.37■■□□□ 1.65
CLTA-202ENST00000345519 KDM2BQ8NHM5 1336 aa25.37■■□□□ 1.65
CLTA-202ENST00000345519 GLTPD2A6NH11 291 aa25.36■■□□□ 1.65
CLTA-202ENST00000345519 NEXNQ0ZGT2 675 aa25.36■■□□□ 1.65
CLTA-202ENST00000345519 FKBP5Q13451 457 aaPredicted RBP25.36■■□□□ 1.65
CLTA-202ENST00000345519 ZNF526Q8TF50 670 aaPredicted RBP25.36■■□□□ 1.65
CLTA-202ENST00000345519 DNAAF4Q8WXU2 420 aa25.36■■□□□ 1.65
CLTA-202ENST00000345519 CEP350Q5VT06 3117 aa25.36■■□□□ 1.65
CLTA-202ENST00000345519 DDX46Q7L014 1031 aaKnown RBP25.35■■□□□ 1.65
CLTA-202ENST00000345519 SLC51AQ86UW1 340 aa25.35■■□□□ 1.65
CLTA-202ENST00000345519 RTL9Q8NET4 1388 aa25.34■■□□□ 1.65
CLTA-202ENST00000345519 C1QTNF8P60827 252 aa25.34■■□□□ 1.65
CLTA-202ENST00000345519 CWF19L2Q2TBE0 894 aaKnown RBP25.34■■□□□ 1.65
CLTA-202ENST00000345519 SP8Q8IXZ3 490 aa25.34■■□□□ 1.65
CLTA-202ENST00000345519 LINS1Q8NG48 757 aa25.34■■□□□ 1.65
CLTA-202ENST00000345519 CDCA7LQ96GN5 454 aa25.34■■□□□ 1.65
CLTA-202ENST00000345519 RTFDC1Q9BY42 306 aaPredicted RBP25.34■■□□□ 1.65
CLTA-202ENST00000345519 PDE8AO60658 829 aa25.33■■□□□ 1.65
CLTA-202ENST00000345519 NMRK2Q9NPI5 230 aa25.33■■□□□ 1.65
CLTA-202ENST00000345519 ADAMTSL1Q8N6G6 1762 aa25.33■■□□□ 1.65
CLTA-202ENST00000345519 H7C1W4 665 aa25.32■■□□□ 1.64
CLTA-202ENST00000345519 IARSP41252 1262 aaKnown RBP25.32■■□□□ 1.64
CLTA-202ENST00000345519 CASP7P55210 303 aa25.32■■□□□ 1.64
CLTA-202ENST00000345519 ZNF277Q9NRM2 450 aaPredicted RBP25.32■■□□□ 1.64
CLTA-202ENST00000345519 CT47B1P0C2W7 299 aaPredicted RBP25.31■■□□□ 1.64
CLTA-202ENST00000345519 GCKRQ14397 625 aa25.31■■□□□ 1.64
CLTA-202ENST00000345519 RTL5Q5HYW3 569 aaPredicted RBP25.31■■□□□ 1.64
CLTA-202ENST00000345519 VPS33BQ9H267 617 aa25.31■■□□□ 1.64
CLTA-202ENST00000345519 PLA2G12BQ9BX93 195 aa25.3■■□□□ 1.64
CLTA-202ENST00000345519 ZNF646O15015 1829 aaPredicted RBP25.3■■□□□ 1.64
CLTA-202ENST00000345519 FZD9O00144 591 aa25.29■■□□□ 1.64
CLTA-202ENST00000345519 BEND3Q5T5X7 828 aa25.29■■□□□ 1.64
CLTA-202ENST00000345519 CELF1Q92879 486 aaKnown RBP25.29■■□□□ 1.64
CLTA-202ENST00000345519 ALDH1L2Q3SY69 923 aa25.28■■□□□ 1.64
CLTA-202ENST00000345519 MRPL50Q8N5N7 158 aaKnown RBP25.28■■□□□ 1.64
CLTA-202ENST00000345519 CTSWP56202 376 aa25.27■■□□□ 1.64
CLTA-202ENST00000345519 CCDC152Q4G0S7 254 aa25.27■■□□□ 1.64
CLTA-202ENST00000345519 PTPRCP08575 1304 aa25.27■■□□□ 1.64
CLTA-202ENST00000345519 POTECB2RU33 542 aa25.26■■□□□ 1.63
CLTA-202ENST00000345519 F6X3S4 739 aa25.26■■□□□ 1.63
CLTA-202ENST00000345519 L3MBTL3Q96JM7 780 aaPredicted RBP25.26■■□□□ 1.63
CLTA-202ENST00000345519 TOMM70O94826 608 aa25.25■■□□□ 1.63
CLTA-202ENST00000345519 BRPF1P55201 1214 aaPredicted RBP25.25■■□□□ 1.63
CLTA-202ENST00000345519 DPY19L2Q6NUT2 758 aa25.25■■□□□ 1.63
CLTA-202ENST00000345519 UBE3BQ7Z3V4 1068 aa25.25■■□□□ 1.63
CLTA-202ENST00000345519 TTLL11Q8NHH1 800 aa25.25■■□□□ 1.63
CLTA-202ENST00000345519 SSH1Q8WYL5 1049 aa25.25■■□□□ 1.63
CLTA-202ENST00000345519 SCN9AQ15858 1988 aa25.25■■□□□ 1.63
CLTA-202ENST00000345519 SUPT20HQ8NEM7 779 aa25.24■■□□□ 1.63
CLTA-202ENST00000345519 JARID2Q92833 1246 aaPredicted RBP25.24■■□□□ 1.63
CLTA-202ENST00000345519 ZNF541Q9H0D2 1346 aa25.23■■□□□ 1.63
CLTA-202ENST00000345519 RPS8P62241 208 aaKnown RBP25.23■■□□□ 1.63
CLTA-202ENST00000345519 RBM46Q8TBY0 533 aaKnown RBP25.23■■□□□ 1.63
CLTA-202ENST00000345519 TMX4Q9H1E5 349 aaPredicted RBP25.23■■□□□ 1.63
CLTA-202ENST00000345519 SEC31BQ9NQW1 1179 aa25.23■■□□□ 1.63
CLTA-202ENST00000345519 ALDH1L1O75891 902 aa25.22■■□□□ 1.63
CLTA-202ENST00000345519 DPP8Q6V1X1 898 aaPredicted RBP25.22■■□□□ 1.63
CLTA-202ENST00000345519 MPNDQ8N594 471 aa25.22■■□□□ 1.63
CLTA-202ENST00000345519 RRAGCQ9HB90 399 aa25.22■■□□□ 1.63
CLTA-202ENST00000345519 PODXL2Q9NZ53 605 aa25.22■■□□□ 1.63
CLTA-202ENST00000345519 CSF1RP07333 972 aa25.21■■□□□ 1.63
CLTA-202ENST00000345519 VEGFAP15692 232 aaPredicted RBP25.21■■□□□ 1.63
CLTA-202ENST00000345519 KIAA2012Q0VF49 1180 aa25.21■■□□□ 1.63
CLTA-202ENST00000345519 UTYO14607 1347 aa25.2■■□□□ 1.62
CLTA-202ENST00000345519 JDP2Q8WYK2 163 aa25.2■■□□□ 1.62
CLTA-202ENST00000345519 DDNO94850 711 aaPredicted RBP25.19■■□□□ 1.62
CLTA-202ENST00000345519 GPC2Q8N158 579 aa25.19■■□□□ 1.62
CLTA-202ENST00000345519 GREM2Q9H772 168 aa25.19■■□□□ 1.62
CLTA-202ENST00000345519 GRM8O00222 908 aa25.18■■□□□ 1.62
CLTA-202ENST00000345519 LARGE2Q8N3Y3 721 aa25.18■■□□□ 1.62
CLTA-202ENST00000345519 PPIP5K2O43314 1243 aa25.17■■□□□ 1.62
CLTA-202ENST00000345519 AOC3Q16853 763 aa25.17■■□□□ 1.62
CLTA-202ENST00000345519 CDC5LQ99459 802 aaKnown RBP25.17■■□□□ 1.62
CLTA-202ENST00000345519 SRCIN1Q9C0H9 1055 aa25.17■■□□□ 1.62
CLTA-202ENST00000345519 GPSM2P81274 684 aa25.16■■□□□ 1.62
CLTA-202ENST00000345519 FOXO4P98177 505 aa25.16■■□□□ 1.62
CLTA-202ENST00000345519 FSTL1Q12841 308 aa25.15■■□□□ 1.62
CLTA-202ENST00000345519 ANKRD18AQ8IVF6 992 aa25.15■■□□□ 1.62
CLTA-202ENST00000345519 BSDC1Q9NW68 430 aaPredicted RBP25.15■■□□□ 1.62
CLTA-202ENST00000345519 POLLQ9UGP5 575 aa25.15■■□□□ 1.62
CLTA-202ENST00000345519 ZBED9Q6R2W3 1325 aa25.14■■□□□ 1.62
CLTA-202ENST00000345519 IQCA1LA6NCM1 817 aa25.14■■□□□ 1.62
CLTA-202ENST00000345519 NIM1KQ8IY84 436 aa25.14■■□□□ 1.62
CLTA-202ENST00000345519 SMC4Q9NTJ3 1288 aa25.14■■□□□ 1.62
CLTA-202ENST00000345519 ZNF609O15014 1411 aa25.13■■□□□ 1.61
CLTA-202ENST00000345519 RARSP54136 660 aaKnown RBP25.13■■□□□ 1.61
CLTA-202ENST00000345519 HNRNPUQ00839 825 aaKnown RBP eCLIP25.13■■□□□ 1.61
CLTA-202ENST00000345519 FAM161AQ3B820 660 aa25.13■■□□□ 1.61
CLTA-202ENST00000345519 TBC1D16Q8TBP0 767 aa25.13■■□□□ 1.61
CLTA-202ENST00000345519 CCDC85AQ96PX6 553 aaPredicted RBP25.13■■□□□ 1.61
CLTA-202ENST00000345519 BCL2L13Q9BXK5 485 aa25.13■■□□□ 1.61
CLTA-202ENST00000345519 ZNRF3Q9ULT6 936 aa25.13■■□□□ 1.61
CLTA-202ENST00000345519 NSFL1CQ9UNZ2 370 aaKnown RBP25.13■■□□□ 1.61
CLTA-202ENST00000345519 XDHP47989 1333 aa25.12■■□□□ 1.61
CLTA-202ENST00000345519 HSPA6P17066 643 aa25.12■■□□□ 1.61
CLTA-202ENST00000345519 EIF6P56537 245 aaKnown RBP25.12■■□□□ 1.61
CLTA-202ENST00000345519 C16orf71Q8IYS4 520 aaPredicted RBP25.12■■□□□ 1.61
CLTA-202ENST00000345519 ITGA6P23229 1130 aa25.11■■□□□ 1.61
CLTA-202ENST00000345519 SLC4A10Q6U841 1118 aa25.11■■□□□ 1.61
CLTA-202ENST00000345519 KAZALD1Q96I82 304 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms