RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 NME9Q86XW9 330 aa20.68■□□□□ 0.9
SMC4-201ENST00000344722 ANKRD24Q8TF21 1146 aa20.68■□□□□ 0.9
SMC4-201ENST00000344722 TMEM63CQ9P1W3 806 aa20.68■□□□□ 0.9
SMC4-201ENST00000344722 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 CETN2P41208 172 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 NCOA7Q8NI08 942 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 KRT83P78385 493 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 MPHOSPH8Q99549 860 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 UTP14AQ9BVJ6 771 aaKnown RBP20.67■□□□□ 0.9
SMC4-201ENST00000344722 SPTLC2O15270 562 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 CEP57Q86XR8 500 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 SPINK5Q9NQ38 1064 aaPredicted RBP20.67■□□□□ 0.9
SMC4-201ENST00000344722 IFIT3O14879 490 aaKnown RBP20.67■□□□□ 0.9
SMC4-201ENST00000344722 ATP2C2O75185 946 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 HYPKQ9NX55 129 aa20.67■□□□□ 0.9
SMC4-201ENST00000344722 Q6ZUG5 572 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 AFAP1L1Q8TED9 768 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 CLSTN2Q9H4D0 955 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 IMPACTQ9P2X3 320 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 ARHGEF12Q9NZN5 1544 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 RHOXF2BP0C7M4 288 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 ZNF569Q5MCW4 686 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 RUFY3Q7L099 469 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 RHOXF2Q9BQY4 288 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 FBXO3Q9UK99 471 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 TTC41PQ6P2S7 1318 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 KARSQ15046 597 aaKnown RBP20.66■□□□□ 0.9
SMC4-201ENST00000344722 IFI16Q16666 785 aaKnown RBP20.66■□□□□ 0.9
SMC4-201ENST00000344722 ANKS4BQ8N8V4 417 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 MYD88Q99836 296 aa20.66■□□□□ 0.9
SMC4-201ENST00000344722 TACC1O75410 805 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 LRP2BPQ9P2M1 347 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 FAM83GA6ND36 823 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 ARFGAP2Q8N6H7 521 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 RNF41Q9H4P4 317 aaPredicted RBP20.65■□□□□ 0.9
SMC4-201ENST00000344722 TMCO5BA8MYB1 307 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 KRT86O43790 486 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 TRIM21P19474 475 aaKnown RBP20.65■□□□□ 0.9
SMC4-201ENST00000344722 POTEDQ86YR6 584 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 CBX8Q9HC52 389 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 AKR1B10O60218 316 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 AMPD3Q01432 767 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 CCDC96Q2M329 555 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 TESK2Q96S53 571 aa20.65■□□□□ 0.9
SMC4-201ENST00000344722 BAG1Q99933 345 aaPredicted RBP20.65■□□□□ 0.9
SMC4-201ENST00000344722 ZBTB7BO15156 539 aaPredicted RBP20.64■□□□□ 0.9
SMC4-201ENST00000344722 B4GALNT4Q76KP1 1039 aa20.64■□□□□ 0.9
SMC4-201ENST00000344722 TTC21BQ7Z4L5 1316 aa20.64■□□□□ 0.9
SMC4-201ENST00000344722 VGLL3A8MV65 326 aa20.64■□□□□ 0.89
SMC4-201ENST00000344722 LZTFL1Q9NQ48 299 aa20.64■□□□□ 0.89
SMC4-201ENST00000344722 IFT140Q96RY7 1462 aa20.64■□□□□ 0.89
SMC4-201ENST00000344722 GSTTP1A0A1W2PQM5 241 aa20.64■□□□□ 0.89
SMC4-201ENST00000344722 TCEANC2Q96MN5 208 aa20.64■□□□□ 0.89
SMC4-201ENST00000344722 VAMP4O75379 141 aa20.64■□□□□ 0.89
SMC4-201ENST00000344722 BMP15O95972 392 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 METTL24Q5JXM2 366 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 CCDC114Q96M63 670 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 GAS2L3Q86XJ1 694 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 RAB34Q9BZG1 259 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 FAM160A1Q05DH4 1040 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 RRAGBQ5VZM2 374 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 CCDC129Q6ZRS4 1044 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 C8orf58Q8NAV2 365 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 RSRC1Q96IZ7 334 aaKnown RBP20.63■□□□□ 0.89
SMC4-201ENST00000344722 KLF18A0A0U1RQI7 1052 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 A6NNZ2 444 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 TUBB8Q3ZCM7 444 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 HSP90AA4PQ58FG1 418 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 DNAJC21Q5F1R6 531 aaKnown RBP20.63■□□□□ 0.89
SMC4-201ENST00000344722 CCDC155Q8N6L0 562 aa20.63■□□□□ 0.89
SMC4-201ENST00000344722 C14orf93Q9H972 538 aaKnown RBP20.63■□□□□ 0.89
SMC4-201ENST00000344722 MKRN1Q9UHC7 482 aaKnown RBP20.63■□□□□ 0.89
SMC4-201ENST00000344722 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
SMC4-201ENST00000344722 TRIM47Q96LD4 638 aa20.62■□□□□ 0.89
SMC4-201ENST00000344722 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
SMC4-201ENST00000344722 CCDC82Q8N4S0 544 aa20.62■□□□□ 0.89
SMC4-201ENST00000344722 OAS2P29728 719 aaKnown RBP20.62■□□□□ 0.89
SMC4-201ENST00000344722 MYL5Q02045 173 aa20.62■□□□□ 0.89
SMC4-201ENST00000344722 TMEM67Q5HYA8 995 aa20.62■□□□□ 0.89
SMC4-201ENST00000344722 NLRP5P59047 1200 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 CREB3L3Q68CJ9 461 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 COL17A1Q9UMD9 1497 aaPredicted RBP20.61■□□□□ 0.89
SMC4-201ENST00000344722 A0A1B0GUA9 196 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 GADD45BO75293 160 aaPredicted RBP20.61■□□□□ 0.89
SMC4-201ENST00000344722 ESCO1Q5FWF5 840 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 ALG1Q9BT22 464 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 CCDC194A0A1B0GVG4 234 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 BRD1O95696 1058 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 TSC1Q92574 1164 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 CARD6Q9BX69 1037 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 A0A087WZG4 1122 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 SLC26A6Q9BXS9 759 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 MAP3K2Q9Y2U5 619 aa20.61■□□□□ 0.89
SMC4-201ENST00000344722 SAMD1Q6SPF0 538 aaPredicted RBP20.6■□□□□ 0.89
SMC4-201ENST00000344722 DRC1Q96MC2 740 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 PPFIA3O75145 1194 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 CHMP4BP1P59074 171 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 TMEM266Q2M3C6 531 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 MICU3Q86XE3 530 aa20.6■□□□□ 0.89
SMC4-201ENST00000344722 IQCA1Q86XH1 822 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms