RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 RIC1Q4ADV7 1423 aa14.96□□□□□ -0.01
SPTLC1-202ENST00000337841 C3orf67Q6ZVT6 689 aa14.96□□□□□ -0.01
SPTLC1-202ENST00000337841 FOXD4L1Q9NU39 408 aa14.96□□□□□ -0.01
SPTLC1-202ENST00000337841 ARFGEF2Q9Y6D5 1785 aa14.96□□□□□ -0.02
SPTLC1-202ENST00000337841 BBOX1O75936 387 aa14.95□□□□□ -0.02
SPTLC1-202ENST00000337841 RLBP1P12271 317 aa14.95□□□□□ -0.02
SPTLC1-202ENST00000337841 RRP1P56182 461 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-202ENST00000337841 GPR162Q16538 588 aa14.95□□□□□ -0.02
SPTLC1-202ENST00000337841 PELP1Q8IZL8 1130 aaKnown RBP14.95□□□□□ -0.02
SPTLC1-202ENST00000337841 TTLL11Q8NHH1 800 aa14.95□□□□□ -0.02
SPTLC1-202ENST00000337841 TMX4Q9H1E5 349 aaPredicted RBP14.95□□□□□ -0.02
SPTLC1-202ENST00000337841 CSF1RP07333 972 aa14.94□□□□□ -0.02
SPTLC1-202ENST00000337841 FOXO4P98177 505 aa14.94□□□□□ -0.02
SPTLC1-202ENST00000337841 LMBR1LQ6UX01 489 aa14.94□□□□□ -0.02
SPTLC1-202ENST00000337841 SUCLG2Q96I99 432 aa14.94□□□□□ -0.02
SPTLC1-202ENST00000337841 DDX19BQ9UMR2 479 aa14.94□□□□□ -0.02
SPTLC1-202ENST00000337841 BCS1LQ9Y276 419 aa14.94□□□□□ -0.02
SPTLC1-202ENST00000337841 SUPT16HQ9Y5B9 1047 aaKnown RBP14.94□□□□□ -0.02
SPTLC1-202ENST00000337841 NRXN2Q9P2S2 1712 aa14.94□□□□□ -0.02
SPTLC1-202ENST00000337841 ZBTB7BO15156 539 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 GNAI2P04899 355 aa14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 CENPBP07199 599 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 MVPQ14764 893 aaKnown RBP14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 CCDC85AQ96PX6 553 aaPredicted RBP14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 MEIS3Q99687 375 aa14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 WWC3Q9ULE0 1092 aa14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 COG6Q9Y2V7 657 aa14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 CHMP3Q9Y3E7 222 aa14.93□□□□□ -0.02
SPTLC1-202ENST00000337841 GRIN3BO60391 1043 aa14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 RPS8P62241 208 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 IFIT5Q13325 482 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 GRAPQ13588 217 aa14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 EPHA10Q5JZY3 1008 aa14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 TMC4Q7Z404 712 aa14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 GRAPLQ8TC17 118 aaPredicted RBP14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 CDC5LQ99459 802 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 AFDNP55196 1824 aaKnown RBP14.92□□□□□ -0.02
SPTLC1-202ENST00000337841 ANKRD36CQ5JPF3 1778 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 ANKRD18BA2A2Z9 1011 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 CCDC57Q2TAC2 916 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 C20orf194Q5TEA3 1177 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 SOGA3Q5TF21 947 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 CC2D2BQ6DHV5 1058 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 PRPF40BQ6NWY9 871 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 ANKRD18AQ8IVF6 992 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 KAZALD1Q96I82 304 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 BICC1Q9H694 974 aaKnown RBP14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 GREM2Q9H772 168 aa14.91□□□□□ -0.02
SPTLC1-202ENST00000337841 ITGA6P23229 1130 aa14.9□□□□□ -0.02
SPTLC1-202ENST00000337841 RABL6Q3YEC7 729 aaPredicted RBP14.9□□□□□ -0.02
SPTLC1-202ENST00000337841 TAF7LQ5H9L4 462 aa14.9□□□□□ -0.02
SPTLC1-202ENST00000337841 SEC31BQ9NQW1 1179 aa14.9□□□□□ -0.02
SPTLC1-202ENST00000337841 ZNF219Q9P2Y4 722 aaPredicted RBP14.9□□□□□ -0.02
SPTLC1-202ENST00000337841 LRRFIP2Q9Y608 721 aaKnown RBP14.9□□□□□ -0.02
SPTLC1-202ENST00000337841 RTL9Q8NET4 1388 aa14.89□□□□□ -0.03
SPTLC1-202ENST00000337841 PPEF1O14829 653 aaPredicted RBP14.89□□□□□ -0.03
SPTLC1-202ENST00000337841 C21orf2O43822 256 aa14.89□□□□□ -0.03
SPTLC1-202ENST00000337841 IGHMBP2P38935 993 aaKnown RBP14.89□□□□□ -0.03
SPTLC1-202ENST00000337841 GRIPAP1Q4V328 841 aa14.89□□□□□ -0.03
SPTLC1-202ENST00000337841 ARHGAP27Q6ZUM4 889 aa14.89□□□□□ -0.03
SPTLC1-202ENST00000337841 SP8Q8IXZ3 490 aa14.89□□□□□ -0.03
SPTLC1-202ENST00000337841 CELF1Q92879 486 aaKnown RBP14.89□□□□□ -0.03
SPTLC1-202ENST00000337841 FAM161AQ3B820 660 aa14.88□□□□□ -0.03
SPTLC1-202ENST00000337841 RTKN2Q8IZC4 609 aa14.88□□□□□ -0.03
SPTLC1-202ENST00000337841 ANKRD44Q8N8A2 993 aa14.88□□□□□ -0.03
SPTLC1-202ENST00000337841 C7orf43Q8WVR3 580 aa14.88□□□□□ -0.03
SPTLC1-202ENST00000337841 MPHOSPH8Q99549 860 aa14.88□□□□□ -0.03
SPTLC1-202ENST00000337841 ATP6V0A2Q9Y487 856 aa14.88□□□□□ -0.03
SPTLC1-202ENST00000337841 YBX3P16989 372 aaKnown RBP eCLIP14.87□□□□□ -0.03
SPTLC1-202ENST00000337841 BSDC1Q9NW68 430 aaPredicted RBP14.87□□□□□ -0.03
SPTLC1-202ENST00000337841 CCDC93Q567U6 631 aa14.86□□□□□ -0.03
SPTLC1-202ENST00000337841 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
SPTLC1-202ENST00000337841 ZBTB40Q9NUA8 1239 aa14.86□□□□□ -0.03
SPTLC1-202ENST00000337841 KIF13BQ9NQT8 1826 aa14.86□□□□□ -0.03
SPTLC1-202ENST00000337841 ATP8B2P98198 1209 aa14.85□□□□□ -0.03
SPTLC1-202ENST00000337841 LDHAL6AQ6ZMR3 332 aa14.85□□□□□ -0.03
SPTLC1-202ENST00000337841 SRGAP3O43295 1099 aa14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 MTX1Q13505 466 aa14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 RPAP2Q8IXW5 612 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 MPNDQ8N594 471 aa14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 ZNF594Q96JF6 807 aaPredicted RBP14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 ANKRD2Q9GZV1 360 aa14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 C1orf115Q9H7X2 142 aa14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 CNNM1Q9NRU3 951 aa14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 ANKRD31Q8N7Z5 1873 aa14.84□□□□□ -0.03
SPTLC1-202ENST00000337841 AAMPQ13685 434 aa14.83□□□□□ -0.04
SPTLC1-202ENST00000337841 DPP8Q6V1X1 898 aaPredicted RBP14.83□□□□□ -0.04
SPTLC1-202ENST00000337841 SUPT20HQ8NEM7 779 aa14.83□□□□□ -0.04
SPTLC1-202ENST00000337841 ANKIB1Q9P2G1 1089 aa14.83□□□□□ -0.04
SPTLC1-202ENST00000337841 MINPP1Q9UNW1 487 aa14.83□□□□□ -0.04
SPTLC1-202ENST00000337841 NSFL1CQ9UNZ2 370 aaKnown RBP14.83□□□□□ -0.04
SPTLC1-202ENST00000337841 OLFM4Q6UX06 510 aa14.82□□□□□ -0.04
SPTLC1-202ENST00000337841 FBXO3Q9UK99 471 aa14.82□□□□□ -0.04
SPTLC1-202ENST00000337841 TNRC6CQ9HCJ0 1690 aaKnown RBP14.81□□□□□ -0.04
SPTLC1-202ENST00000337841 N4BP2Q86UW6 1770 aaPredicted RBP14.81□□□□□ -0.04
SPTLC1-202ENST00000337841 HMMRO75330 724 aa14.81□□□□□ -0.04
SPTLC1-202ENST00000337841 RFX5P48382 616 aaPredicted RBP14.81□□□□□ -0.04
SPTLC1-202ENST00000337841 FKBP4Q02790 459 aaKnown RBP eCLIP14.81□□□□□ -0.04
SPTLC1-202ENST00000337841 PTPN12Q05209 780 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms