RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 ZNF219Q9P2Y4 722 aaPredicted RBP19.05■□□□□ 0.64
NSMCE3-201ENST00000332303 POLR3AO14802 1390 aaPredicted RBP19.05■□□□□ 0.64
NSMCE3-201ENST00000332303 GNAQP50148 359 aa19.05■□□□□ 0.64
NSMCE3-201ENST00000332303 DNA2P51530 1060 aa19.05■□□□□ 0.64
NSMCE3-201ENST00000332303 TRAF1Q13077 416 aa19.05■□□□□ 0.64
NSMCE3-201ENST00000332303 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.05■□□□□ 0.64
NSMCE3-201ENST00000332303 EIF4A2Q14240 407 aaKnown RBP19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 DNAJC5BQ9UF47 199 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 SHTN1A0MZ66 631 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 N4BP3O15049 544 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 PLCD4Q9BRC7 762 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 UHRF1BP1LA0JNW5 1464 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 CYP7A1P22680 504 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 IFFO1Q0D2I5 559 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 SLC39A6Q13433 755 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 ALG1Q9BT22 464 aa19.04■□□□□ 0.64
NSMCE3-201ENST00000332303 MACROD2A1Z1Q3 448 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 IBSPP21815 317 aaPredicted RBP19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 ZGPATQ8N5A5 531 aaKnown RBP19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 TCEANC2Q96MN5 208 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 CCDC113Q9H0I3 377 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 POTEB2H3BUK9 544 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 RMND1Q9NWS8 449 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 NLRP3Q96P20 1036 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 CGNQ9P2M7 1197 aaKnown RBP19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 SPECC1Q5M775 1068 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 CCDC91Q7Z6B0 441 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 HOOK3Q86VS8 718 aa19.03■□□□□ 0.64
NSMCE3-201ENST00000332303 MSH6P52701 1360 aa19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 RBM27Q9P2N5 1060 aaKnown RBP19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 RTN1Q16799 776 aa19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 GIMAP6Q6P9H5 292 aa19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 CHMP4BP1P59074 171 aa19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 SPAG1Q07617 926 aa19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 SNW1Q13573 536 aaKnown RBP19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 PPP4R3BQ5MIZ7 849 aa19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 TRIM47Q96LD4 638 aa19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
NSMCE3-201ENST00000332303 LRSAM1Q6UWE0 723 aa19.02■□□□□ 0.63
NSMCE3-201ENST00000332303 SLC9C2Q5TAH2 1124 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 SMARCC1Q92922 1105 aaPredicted RBP19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 PLCH2O75038 1416 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 PPIP5K1Q6PFW1 1433 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 ERICH4A6NGS2 130 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 TMCO5BA8MYB1 307 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 ISM2Q6H9L7 571 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 CTNNBL1Q8WYA6 563 aaPredicted RBP19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 LRRC2Q9BYS8 371 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 PARD3Q8TEW0 1356 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 AKR1B10O60218 316 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 TTLL12Q14166 644 aaPredicted RBP19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 MRPS27Q92552 414 aaKnown RBP19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 DCTPP1Q9H773 170 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 FLT4P35916 1363 aa19.01■□□□□ 0.63
NSMCE3-201ENST00000332303 MAP2K1Q02750 393 aaPredicted RBP19■□□□□ 0.63
NSMCE3-201ENST00000332303 HLTFQ14527 1009 aaKnown RBP eCLIP19■□□□□ 0.63
NSMCE3-201ENST00000332303 ZSCAN23Q3MJ62 389 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 IFIT1BQ5T764 474 aaKnown RBP19■□□□□ 0.63
NSMCE3-201ENST00000332303 SNX21Q969T3 373 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 SLC4A4Q9Y6R1 1079 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 TTC41PQ6P2S7 1318 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 ERMNQ8TAM6 284 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 ST5P78524 1137 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 SYCP3Q8IZU3 236 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 SETDB2Q96T68 719 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 VAMP4O75379 141 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 NAA16Q6N069 864 aaPredicted RBP19■□□□□ 0.63
NSMCE3-201ENST00000332303 EHBP1Q8NDI1 1231 aa19■□□□□ 0.63
NSMCE3-201ENST00000332303 URB2Q14146 1524 aaKnown RBP19■□□□□ 0.63
NSMCE3-201ENST00000332303 ZNF608Q9ULD9 1512 aaPredicted RBP19■□□□□ 0.63
NSMCE3-201ENST00000332303 TBCAO75347 108 aaKnown RBP18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 FAM200AQ8TCP9 573 aa18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 TSPY3P0CV98 308 aa18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 TSPY8P0CW00 308 aa18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 NOP2P46087 812 aaKnown RBP18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 EXOC1Q9NV70 894 aa18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 SAMM50Q9Y512 469 aa18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 GNG11P61952 73 aa18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 MTHFSDQ2M296 383 aaKnown RBP18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 ZNF622Q969S3 477 aaKnown RBP eCLIP18.99■□□□□ 0.63
NSMCE3-201ENST00000332303 CTNNA2P26232 953 aa18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 GCOM1H8Y6P7 765 aaPredicted RBP18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 MYZAPP0CAP1 466 aa18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 UBASH3AP57075 661 aa18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 PRAG1Q86YV5 1406 aa18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 TRMT1LQ7Z2T5 733 aaKnown RBP18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 INCENPQ9NQS7 918 aa18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 IQSEC3Q9UPP2 1182 aaPredicted RBP18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 PRC1O43663 620 aa18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 Q6ZUG5 572 aa18.98■□□□□ 0.63
NSMCE3-201ENST00000332303 A2MP01023 1474 aa18.97■□□□□ 0.63
NSMCE3-201ENST00000332303 MYO1BO43795 1136 aa18.97■□□□□ 0.63
NSMCE3-201ENST00000332303 CTAGE1Q96RT6 745 aa18.97■□□□□ 0.63
NSMCE3-201ENST00000332303 LIG1P18858 919 aa18.97■□□□□ 0.63
NSMCE3-201ENST00000332303 SMC1AQ14683 1233 aaKnown RBP18.97■□□□□ 0.63
NSMCE3-201ENST00000332303 SPAG5Q96R06 1193 aa18.97■□□□□ 0.63
NSMCE3-201ENST00000332303 GOPCQ9HD26 462 aa18.97■□□□□ 0.63
NSMCE3-201ENST00000332303 PAG1Q9NWQ8 432 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms