RNA–Protein interactions for RNA: ENST00000317459.10

TRPT1-201, Transcript of tRNA phosphotransferase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPT1, Length 962 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-201ENST00000317459 ZNF277Q9NRM2 450 aaPredicted RBP26.06■■□□□ 1.76
TRPT1-201ENST00000317459 CCDC88AQ3V6T2 1871 aa26.06■■□□□ 1.76
TRPT1-201ENST00000317459 ALDH1L2Q3SY69 923 aa26.05■■□□□ 1.76
TRPT1-201ENST00000317459 CCDC152Q4G0S7 254 aa26.05■■□□□ 1.76
TRPT1-201ENST00000317459 UBE3BQ7Z3V4 1068 aa26.05■■□□□ 1.76
TRPT1-201ENST00000317459 PSMD1Q99460 953 aa26.05■■□□□ 1.76
TRPT1-201ENST00000317459 BCL2L13Q9BXK5 485 aa26.05■■□□□ 1.76
TRPT1-201ENST00000317459 KDM2BQ8NHM5 1336 aa26.05■■□□□ 1.76
TRPT1-201ENST00000317459 H7C1W4 665 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 BEND3Q5T5X7 828 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 SLC4A10Q6U841 1118 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 TMC4Q7Z404 712 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 SLC51AQ86UW1 340 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 SP8Q8IXZ3 490 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 SMC4Q9NTJ3 1288 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 TIAM2Q8IVF5 1701 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 SNED1Q8TER0 1413 aa26.04■■□□□ 1.76
TRPT1-201ENST00000317459 CELF1Q92879 486 aaKnown RBP26.03■■□□□ 1.76
TRPT1-201ENST00000317459 CCDC85AQ96PX6 553 aaPredicted RBP26.03■■□□□ 1.76
TRPT1-201ENST00000317459 IARSP41252 1262 aaKnown RBP26.02■■□□□ 1.76
TRPT1-201ENST00000317459 CTSWP56202 376 aa26.02■■□□□ 1.76
TRPT1-201ENST00000317459 PTPRCP08575 1304 aa26.02■■□□□ 1.76
TRPT1-201ENST00000317459 DPP8Q6V1X1 898 aaPredicted RBP26■■□□□ 1.75
TRPT1-201ENST00000317459 SEC31BQ9NQW1 1179 aa26■■□□□ 1.75
TRPT1-201ENST00000317459 DICER1Q9UPY3 1922 aaKnown RBP26■■□□□ 1.75
TRPT1-201ENST00000317459 GLTPD2A6NH11 291 aa25.99■■□□□ 1.75
TRPT1-201ENST00000317459 RPS8P62241 208 aaKnown RBP25.99■■□□□ 1.75
TRPT1-201ENST00000317459 DPY19L2Q6NUT2 758 aa25.99■■□□□ 1.75
TRPT1-201ENST00000317459 MPNDQ8N594 471 aa25.99■■□□□ 1.75
TRPT1-201ENST00000317459 SRCIN1Q9C0H9 1055 aa25.99■■□□□ 1.75
TRPT1-201ENST00000317459 NMRK2Q9NPI5 230 aa25.99■■□□□ 1.75
TRPT1-201ENST00000317459 TAF1P21675 1872 aa25.99■■□□□ 1.75
TRPT1-201ENST00000317459 ALDH1L1O75891 902 aa25.98■■□□□ 1.75
TRPT1-201ENST00000317459 CASP7P55210 303 aa25.98■■□□□ 1.75
TRPT1-201ENST00000317459 SUPT20HQ8NEM7 779 aa25.98■■□□□ 1.75
TRPT1-201ENST00000317459 TTLL11Q8NHH1 800 aa25.97■■□□□ 1.75
TRPT1-201ENST00000317459 JDP2Q8WYK2 163 aa25.97■■□□□ 1.75
TRPT1-201ENST00000317459 PLA2G12BQ9BX93 195 aa25.97■■□□□ 1.75
TRPT1-201ENST00000317459 C9orf78Q9NZ63 289 aaPredicted RBP25.96■■□□□ 1.75
TRPT1-201ENST00000317459 ZBED9Q6R2W3 1325 aa25.95■■□□□ 1.75
TRPT1-201ENST00000317459 GRM8O00222 908 aa25.95■■□□□ 1.74
TRPT1-201ENST00000317459 KIF3CO14782 793 aa25.95■■□□□ 1.74
TRPT1-201ENST00000317459 ANKRD18AQ8IVF6 992 aa25.95■■□□□ 1.74
TRPT1-201ENST00000317459 LARGE2Q8N3Y3 721 aa25.95■■□□□ 1.74
TRPT1-201ENST00000317459 CDC5LQ99459 802 aaKnown RBP25.95■■□□□ 1.74
TRPT1-201ENST00000317459 RTFDC1Q9BY42 306 aaPredicted RBP25.95■■□□□ 1.74
TRPT1-201ENST00000317459 GREM2Q9H772 168 aa25.95■■□□□ 1.74
TRPT1-201ENST00000317459 COL4A1P02462 1669 aa25.94■■□□□ 1.74
TRPT1-201ENST00000317459 PPIP5K2O43314 1243 aa25.94■■□□□ 1.74
TRPT1-201ENST00000317459 RARSP54136 660 aaKnown RBP25.94■■□□□ 1.74
TRPT1-201ENST00000317459 RRAGCQ9HB90 399 aa25.94■■□□□ 1.74
TRPT1-201ENST00000317459 NSFL1CQ9UNZ2 370 aaKnown RBP25.94■■□□□ 1.74
TRPT1-201ENST00000317459 VPS33BQ9H267 617 aa25.93■■□□□ 1.74
TRPT1-201ENST00000317459 LRRC37AA6NMS7 1700 aa25.93■■□□□ 1.74
TRPT1-201ENST00000317459 RTL9Q8NET4 1388 aa25.93■■□□□ 1.74
TRPT1-201ENST00000317459 MYH3P11055 1940 aa25.92■■□□□ 1.74
TRPT1-201ENST00000317459 C1QTNF8P60827 252 aa25.92■■□□□ 1.74
TRPT1-201ENST00000317459 AOC3Q16853 763 aa25.92■■□□□ 1.74
TRPT1-201ENST00000317459 NOB1Q9ULX3 412 aaKnown RBP25.92■■□□□ 1.74
TRPT1-201ENST00000317459 BRPF1P55201 1214 aaPredicted RBP25.91■■□□□ 1.74
TRPT1-201ENST00000317459 GPSM2P81274 684 aa25.91■■□□□ 1.74
TRPT1-201ENST00000317459 NIM1KQ8IY84 436 aa25.91■■□□□ 1.74
TRPT1-201ENST00000317459 C16orf71Q8IYS4 520 aaPredicted RBP25.91■■□□□ 1.74
TRPT1-201ENST00000317459 DDNO94850 711 aaPredicted RBP25.9■■□□□ 1.74
TRPT1-201ENST00000317459 FAM161AQ3B820 660 aa25.9■■□□□ 1.74
TRPT1-201ENST00000317459 ZNF541Q9H0D2 1346 aa25.89■■□□□ 1.74
TRPT1-201ENST00000317459 C6orf229H3BNL8 230 aa25.89■■□□□ 1.74
TRPT1-201ENST00000317459 FZD9O00144 591 aa25.89■■□□□ 1.74
TRPT1-201ENST00000317459 CSF1RP07333 972 aa25.89■■□□□ 1.74
TRPT1-201ENST00000317459 VEGFAP15692 232 aaPredicted RBP25.89■■□□□ 1.74
TRPT1-201ENST00000317459 ITGA6P23229 1130 aa25.89■■□□□ 1.74
TRPT1-201ENST00000317459 EIF6P56537 245 aaKnown RBP25.89■■□□□ 1.74
TRPT1-201ENST00000317459 API5Q9BZZ5 524 aaKnown RBP25.89■■□□□ 1.74
TRPT1-201ENST00000317459 IGHMBP2P38935 993 aaKnown RBP25.88■■□□□ 1.73
TRPT1-201ENST00000317459 ANKIB1Q9P2G1 1089 aa25.88■■□□□ 1.73
TRPT1-201ENST00000317459 CHMP3Q9Y3E7 222 aa25.88■■□□□ 1.73
TRPT1-201ENST00000317459 KIF16BQ96L93 1317 aa25.88■■□□□ 1.73
TRPT1-201ENST00000317459 COL4A5P29400 1685 aa25.87■■□□□ 1.73
TRPT1-201ENST00000317459 FOXO4P98177 505 aa25.87■■□□□ 1.73
TRPT1-201ENST00000317459 KIAA2012Q0VF49 1180 aa25.87■■□□□ 1.73
TRPT1-201ENST00000317459 DUOX1Q9NRD9 1551 aa25.86■■□□□ 1.73
TRPT1-201ENST00000317459 TOMM70O94826 608 aa25.86■■□□□ 1.73
TRPT1-201ENST00000317459 EYA3Q99504 573 aa25.86■■□□□ 1.73
TRPT1-201ENST00000317459 BSDC1Q9NW68 430 aaPredicted RBP25.86■■□□□ 1.73
TRPT1-201ENST00000317459 POLLQ9UGP5 575 aa25.86■■□□□ 1.73
TRPT1-201ENST00000317459 WDR90Q96KV7 1748 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 ANKRD18BA2A2Z9 1011 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 NBPF7P0C2Y1 421 aaPredicted RBP25.85■■□□□ 1.73
TRPT1-201ENST00000317459 WASHC4Q2M389 1173 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 EPHA10Q5JZY3 1008 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 LMBR1LQ6UX01 489 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 TBC1D16Q8TBP0 767 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 MPHOSPH8Q99549 860 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 PODXL2Q9NZ53 605 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 GGA1Q9UJY5 639 aa25.85■■□□□ 1.73
TRPT1-201ENST00000317459 UFL1O94874 794 aa25.84■■□□□ 1.73
TRPT1-201ENST00000317459 CCT4P50991 539 aaKnown RBP25.84■■□□□ 1.73
TRPT1-201ENST00000317459 IFIT5Q13325 482 aaKnown RBP25.84■■□□□ 1.73
TRPT1-201ENST00000317459 SUCLG2Q96I99 432 aa25.84■■□□□ 1.73
TRPT1-201ENST00000317459 ZNRF3Q9ULT6 936 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms