RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 ADCK5Q3MIX3 580 aa23.37■■□□□ 1.33
AP3S1-201ENST00000316788 TOM1L2Q6ZVM7 507 aa23.37■■□□□ 1.33
AP3S1-201ENST00000316788 TTC5Q8N0Z6 440 aa23.37■■□□□ 1.33
AP3S1-201ENST00000316788 MYD88Q99836 296 aa23.37■■□□□ 1.33
AP3S1-201ENST00000316788 LAMB4A4D0S4 1761 aa23.37■■□□□ 1.33
AP3S1-201ENST00000316788 GLI3P10071 1580 aa23.37■■□□□ 1.33
AP3S1-201ENST00000316788 SLC27A2O14975 620 aa23.36■■□□□ 1.33
AP3S1-201ENST00000316788 RFX5P48382 616 aaPredicted RBP23.36■■□□□ 1.33
AP3S1-201ENST00000316788 NAP1L5Q96NT1 182 aaPredicted RBP23.36■■□□□ 1.33
AP3S1-201ENST00000316788 CCDC8Q9H0W5 538 aaPredicted RBP23.36■■□□□ 1.33
AP3S1-201ENST00000316788 GADD45BO75293 160 aaPredicted RBP23.36■■□□□ 1.33
AP3S1-201ENST00000316788 LARGE1O95461 756 aa23.36■■□□□ 1.33
AP3S1-201ENST00000316788 FAM227BQ96M60 508 aa23.36■■□□□ 1.33
AP3S1-201ENST00000316788 FSD1Q9BTV5 496 aa23.36■■□□□ 1.33
AP3S1-201ENST00000316788 RGS17Q9UGC6 210 aaPredicted RBP23.36■■□□□ 1.33
AP3S1-201ENST00000316788 MTMR6Q9Y217 621 aa23.36■■□□□ 1.33
AP3S1-201ENST00000316788 ZNF500O60304 480 aaPredicted RBP23.35■■□□□ 1.33
AP3S1-201ENST00000316788 GJB2P29033 226 aa23.35■■□□□ 1.33
AP3S1-201ENST00000316788 TLR7Q9NYK1 1049 aaKnown RBP23.35■■□□□ 1.33
AP3S1-201ENST00000316788 CCDC39Q9UFE4 941 aa23.35■■□□□ 1.33
AP3S1-201ENST00000316788 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.35■■□□□ 1.33
AP3S1-201ENST00000316788 MYL6BP14649 208 aa23.34■■□□□ 1.33
AP3S1-201ENST00000316788 EPHA10Q5JZY3 1008 aa23.34■■□□□ 1.33
AP3S1-201ENST00000316788 USPL1Q5W0Q7 1092 aa23.34■■□□□ 1.33
AP3S1-201ENST00000316788 CCDC83Q8IWF9 413 aa23.34■■□□□ 1.33
AP3S1-201ENST00000316788 KCNJ4P48050 445 aa23.33■■□□□ 1.33
AP3S1-201ENST00000316788 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.33
AP3S1-201ENST00000316788 A0A0D9SFI3 127 aa23.33■■□□□ 1.32
AP3S1-201ENST00000316788 CYP27B1O15528 508 aa23.33■■□□□ 1.32
AP3S1-201ENST00000316788 CPA1P15085 419 aa23.33■■□□□ 1.32
AP3S1-201ENST00000316788 PTPN12Q05209 780 aaKnown RBP23.33■■□□□ 1.32
AP3S1-201ENST00000316788 BOLA2Q9H3K6 86 aa23.33■■□□□ 1.32
AP3S1-201ENST00000316788 CNPY2Q9Y2B0 182 aa23.33■■□□□ 1.32
AP3S1-201ENST00000316788 OFD1O75665 1012 aa23.32■■□□□ 1.32
AP3S1-201ENST00000316788 PDCP20941 246 aa23.32■■□□□ 1.32
AP3S1-201ENST00000316788 TERF1P54274 439 aa23.32■■□□□ 1.32
AP3S1-201ENST00000316788 ST3GAL1Q11201 340 aa23.32■■□□□ 1.32
AP3S1-201ENST00000316788 KRT32Q14532 448 aa23.32■■□□□ 1.32
AP3S1-201ENST00000316788 ME3Q16798 604 aa23.32■■□□□ 1.32
AP3S1-201ENST00000316788 PLBD2Q8NHP8 589 aa23.32■■□□□ 1.32
AP3S1-201ENST00000316788 GDPD2Q9HCC8 539 aa23.32■■□□□ 1.32
AP3S1-201ENST00000316788 ARFGEF2Q9Y6D5 1785 aa23.31■■□□□ 1.32
AP3S1-201ENST00000316788 RPS6KB1P23443 525 aa23.31■■□□□ 1.32
AP3S1-201ENST00000316788 VPS72Q15906 364 aa23.31■■□□□ 1.32
AP3S1-201ENST00000316788 TNNI3KQ59H18 835 aa23.31■■□□□ 1.32
AP3S1-201ENST00000316788 BLOC1S2Q6QNY1 142 aa23.31■■□□□ 1.32
AP3S1-201ENST00000316788 USP16Q9Y5T5 823 aa23.31■■□□□ 1.32
AP3S1-201ENST00000316788 FPGT-TNNI3KV9GXZ4 949 aa23.31■■□□□ 1.32
AP3S1-201ENST00000316788 CASP7P55210 303 aa23.3■■□□□ 1.32
AP3S1-201ENST00000316788 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.3■■□□□ 1.32
AP3S1-201ENST00000316788 SIL1Q9H173 461 aa23.3■■□□□ 1.32
AP3S1-201ENST00000316788 ZKSCAN5Q9Y2L8 839 aa23.3■■□□□ 1.32
AP3S1-201ENST00000316788 SPATA31A1Q5TZJ5 1347 aa23.3■■□□□ 1.32
AP3S1-201ENST00000316788 SPATA31A5Q5VU36 1347 aa23.3■■□□□ 1.32
AP3S1-201ENST00000316788 SPATA31A7Q8IWB4 1347 aa23.3■■□□□ 1.32
AP3S1-201ENST00000316788 TPM2P07951 284 aa23.3■■□□□ 1.32
AP3S1-201ENST00000316788 CARD10Q9BWT7 1032 aa23.3■■□□□ 1.32
AP3S1-201ENST00000316788 QTRT2Q9H974 415 aaKnown RBP23.3■■□□□ 1.32
AP3S1-201ENST00000316788 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.29■■□□□ 1.32
AP3S1-201ENST00000316788 ATRNO75882 1429 aa23.29■■□□□ 1.32
AP3S1-201ENST00000316788 TAF5LO75529 589 aa23.29■■□□□ 1.32
AP3S1-201ENST00000316788 DBNLQ9UJU6 430 aaKnown RBP23.29■■□□□ 1.32
AP3S1-201ENST00000316788 TPCN1Q9ULQ1 816 aa23.29■■□□□ 1.32
AP3S1-201ENST00000316788 CABP4P57796 275 aa23.28■■□□□ 1.32
AP3S1-201ENST00000316788 GPR108Q9NPR9 543 aa23.28■■□□□ 1.32
AP3S1-201ENST00000316788 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.28■■□□□ 1.32
AP3S1-201ENST00000316788 ELP1O95163 1332 aa23.27■■□□□ 1.32
AP3S1-201ENST00000316788 KLHDC4Q8TBB5 520 aa23.27■■□□□ 1.32
AP3S1-201ENST00000316788 HAUS7Q99871 368 aa23.27■■□□□ 1.32
AP3S1-201ENST00000316788 LARP6Q9BRS8 491 aaKnown RBP23.27■■□□□ 1.32
AP3S1-201ENST00000316788 TRPC5Q9UL62 973 aaPredicted RBP23.27■■□□□ 1.32
AP3S1-201ENST00000316788 U3KPZ7 1027 aaPredicted RBP23.27■■□□□ 1.32
AP3S1-201ENST00000316788 AFDNP55196 1824 aaKnown RBP23.26■■□□□ 1.31
AP3S1-201ENST00000316788 H7C1W4 665 aa23.25■■□□□ 1.31
AP3S1-201ENST00000316788 TFCP2Q12800 502 aa23.25■■□□□ 1.31
AP3S1-201ENST00000316788 FOXD4L6Q3SYB3 417 aaPredicted RBP23.25■■□□□ 1.31
AP3S1-201ENST00000316788 ZNF772Q68DY9 489 aaPredicted RBP23.25■■□□□ 1.31
AP3S1-201ENST00000316788 POTEAQ6S8J7 498 aa23.25■■□□□ 1.31
AP3S1-201ENST00000316788 FOXD4L3Q6VB84 417 aaPredicted RBP23.25■■□□□ 1.31
AP3S1-201ENST00000316788 UBE3BQ7Z3V4 1068 aa23.25■■□□□ 1.31
AP3S1-201ENST00000316788 GJD4Q96KN9 370 aaPredicted RBP23.25■■□□□ 1.31
AP3S1-201ENST00000316788 A0A087WZG4 1122 aa23.25■■□□□ 1.31
AP3S1-201ENST00000316788 ZNF589Q86UQ0 364 aaPredicted RBP23.25■■□□□ 1.31
AP3S1-201ENST00000316788 RNF214Q8ND24 703 aa23.25■■□□□ 1.31
AP3S1-201ENST00000316788 PALLDQ8WX93 1383 aa23.24■■□□□ 1.31
AP3S1-201ENST00000316788 TOB2Q14106 344 aaPredicted RBP23.24■■□□□ 1.31
AP3S1-201ENST00000316788 FAM98CQ17RN3 349 aaKnown RBP23.24■■□□□ 1.31
AP3S1-201ENST00000316788 UBR2Q8IWV8 1755 aa23.23■■□□□ 1.31
AP3S1-201ENST00000316788 FIBPO43427 364 aa23.23■■□□□ 1.31
AP3S1-201ENST00000316788 DNM1Q05193 864 aaKnown RBP23.23■■□□□ 1.31
AP3S1-201ENST00000316788 LARP1BQ659C4 914 aaKnown RBP23.23■■□□□ 1.31
AP3S1-201ENST00000316788 FUCA2Q9BTY2 467 aa23.23■■□□□ 1.31
AP3S1-201ENST00000316788 SH3TC1Q8TE82 1336 aa23.23■■□□□ 1.31
AP3S1-201ENST00000316788 PCDH11XQ9BZA7 1347 aa23.23■■□□□ 1.31
AP3S1-201ENST00000316788 PCDH11YQ9BZA8 1340 aa23.23■■□□□ 1.31
AP3S1-201ENST00000316788 PAPPAQ13219 1627 aa23.23■■□□□ 1.31
AP3S1-201ENST00000316788 ERVV-2B6SEH9 535 aa23.22■■□□□ 1.31
AP3S1-201ENST00000316788 KRT85P78386 507 aa23.22■■□□□ 1.31
AP3S1-201ENST00000316788 NECAB1Q8N987 351 aa23.22■■□□□ 1.31
AP3S1-201ENST00000316788 ZNF609O15014 1411 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms