RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 ZBTB38Q8NAP3 1195 aaPredicted RBP16.3■□□□□ 0.2
CKS2-201ENST00000314355 CCDC191Q8NCU4 936 aa16.3■□□□□ 0.2
CKS2-201ENST00000314355 ZNF428Q96B54 188 aa16.3■□□□□ 0.2
CKS2-201ENST00000314355 AOC3Q16853 763 aa16.29■□□□□ 0.2
CKS2-201ENST00000314355 CCDC184Q52MB2 194 aa16.29■□□□□ 0.2
CKS2-201ENST00000314355 ZNRF3Q9ULT6 936 aa16.29■□□□□ 0.2
CKS2-201ENST00000314355 NSFL1CQ9UNZ2 370 aaKnown RBP16.29■□□□□ 0.2
CKS2-201ENST00000314355 IL16Q14005 1332 aa16.28■□□□□ 0.2
CKS2-201ENST00000314355 TNIP1Q15025 636 aa16.28■□□□□ 0.2
CKS2-201ENST00000314355 TWISTNBQ3B726 338 aaPredicted RBP16.28■□□□□ 0.2
CKS2-201ENST00000314355 METTL22Q9BUU2 404 aaPredicted RBP16.28■□□□□ 0.2
CKS2-201ENST00000314355 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
CKS2-201ENST00000314355 CWC25Q9NXE8 425 aaPredicted RBP16.28■□□□□ 0.2
CKS2-201ENST00000314355 SALL2Q9Y467 1007 aaPredicted RBP16.28■□□□□ 0.2
CKS2-201ENST00000314355 G3V3G9 751 aa16.27■□□□□ 0.2
CKS2-201ENST00000314355 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.2
CKS2-201ENST00000314355 DCAF8Q5TAQ9 597 aa16.27■□□□□ 0.2
CKS2-201ENST00000314355 KSR2Q6VAB6 950 aa16.27■□□□□ 0.2
CKS2-201ENST00000314355 WDR63Q8IWG1 891 aa16.27■□□□□ 0.2
CKS2-201ENST00000314355 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
CKS2-201ENST00000314355 EYA3Q99504 573 aa16.27■□□□□ 0.2
CKS2-201ENST00000314355 BCL2L13Q9BXK5 485 aa16.27■□□□□ 0.2
CKS2-201ENST00000314355 CREBZFQ9NS37 354 aa16.27■□□□□ 0.2
CKS2-201ENST00000314355 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
CKS2-201ENST00000314355 PCCAP05165 728 aaPredicted RBP16.26■□□□□ 0.19
CKS2-201ENST00000314355 RPS8P62241 208 aaKnown RBP16.26■□□□□ 0.19
CKS2-201ENST00000314355 WASHC4Q2M389 1173 aa16.26■□□□□ 0.19
CKS2-201ENST00000314355 CIAPIN1Q6FI81 312 aa16.26■□□□□ 0.19
CKS2-201ENST00000314355 FAM9BQ8IZU0 186 aa16.26■□□□□ 0.19
CKS2-201ENST00000314355 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
CKS2-201ENST00000314355 SCN4AP35499 1836 aa16.25■□□□□ 0.19
CKS2-201ENST00000314355 PDE8AO60658 829 aa16.25■□□□□ 0.19
CKS2-201ENST00000314355 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
CKS2-201ENST00000314355 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
CKS2-201ENST00000314355 POTEJP0CG39 1038 aa16.25■□□□□ 0.19
CKS2-201ENST00000314355 KIAA2012Q0VF49 1180 aa16.25■□□□□ 0.19
CKS2-201ENST00000314355 USP50Q70EL3 339 aaPredicted RBP16.25■□□□□ 0.19
CKS2-201ENST00000314355 CNTROBQ8N137 903 aa16.25■□□□□ 0.19
CKS2-201ENST00000314355 TSPYL6Q8N831 410 aa16.25■□□□□ 0.19
CKS2-201ENST00000314355 PI4KAP2A4QPH2 592 aa16.24■□□□□ 0.19
CKS2-201ENST00000314355 TMEM88BA6NKF7 163 aa16.24■□□□□ 0.19
CKS2-201ENST00000314355 PI4KAP1Q8N8J0 262 aa16.24■□□□□ 0.19
CKS2-201ENST00000314355 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
CKS2-201ENST00000314355 ANKRD36CQ5JPF3 1778 aa16.23■□□□□ 0.19
CKS2-201ENST00000314355 CELF1Q92879 486 aaKnown RBP16.23■□□□□ 0.19
CKS2-201ENST00000314355 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
CKS2-201ENST00000314355 MYH16Q9H6N6 1097 aa16.23■□□□□ 0.19
CKS2-201ENST00000314355 ANKIB1Q9P2G1 1089 aa16.23■□□□□ 0.19
CKS2-201ENST00000314355 H7C1D1 291 aa16.22■□□□□ 0.19
CKS2-201ENST00000314355 RIMBP2O15034 1052 aa16.22■□□□□ 0.19
CKS2-201ENST00000314355 EPS15P42566 896 aa16.22■□□□□ 0.19
CKS2-201ENST00000314355 CXCL9Q07325 125 aa16.22■□□□□ 0.19
CKS2-201ENST00000314355 ANKRD18AQ8IVF6 992 aa16.22■□□□□ 0.19
CKS2-201ENST00000314355 ADARB2Q9NS39 739 aaKnown RBP16.22■□□□□ 0.19
CKS2-201ENST00000314355 SNED1Q8TER0 1413 aa16.21■□□□□ 0.19
CKS2-201ENST00000314355 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.19
CKS2-201ENST00000314355 MAP1SQ66K74 1059 aaPredicted RBP16.21■□□□□ 0.19
CKS2-201ENST00000314355 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
CKS2-201ENST00000314355 MKRN1Q9UHC7 482 aaKnown RBP16.21■□□□□ 0.19
CKS2-201ENST00000314355 RAD17O75943 681 aa16.2■□□□□ 0.18
CKS2-201ENST00000314355 ITGBL1O95965 494 aaPredicted RBP16.2■□□□□ 0.18
CKS2-201ENST00000314355 SCNN1DP51172 638 aa16.2■□□□□ 0.18
CKS2-201ENST00000314355 GPRC5DQ9NZD1 345 aa16.2■□□□□ 0.18
CKS2-201ENST00000314355 PASKQ96RG2 1323 aa16.19■□□□□ 0.18
CKS2-201ENST00000314355 CDHR2Q9BYE9 1310 aa16.19■□□□□ 0.18
CKS2-201ENST00000314355 GPSM2P81274 684 aa16.19■□□□□ 0.18
CKS2-201ENST00000314355 IFFO2Q5TF58 517 aa16.19■□□□□ 0.18
CKS2-201ENST00000314355 JARID2Q92833 1246 aaPredicted RBP16.19■□□□□ 0.18
CKS2-201ENST00000314355 CCDC85AQ96PX6 553 aaPredicted RBP16.19■□□□□ 0.18
CKS2-201ENST00000314355 GGA1Q9UJY5 639 aa16.19■□□□□ 0.18
CKS2-201ENST00000314355 GMPSP49915 693 aaPredicted RBP16.18■□□□□ 0.18
CKS2-201ENST00000314355 EXOSC9Q06265 439 aaKnown RBP16.18■□□□□ 0.18
CKS2-201ENST00000314355 FLIIQ13045 1269 aa16.18■□□□□ 0.18
CKS2-201ENST00000314355 DEFB115Q30KQ5 88 aa16.18■□□□□ 0.18
CKS2-201ENST00000314355 SEC31BQ9NQW1 1179 aa16.18■□□□□ 0.18
CKS2-201ENST00000314355 CNOT7Q9UIV1 285 aaKnown RBP16.18■□□□□ 0.18
CKS2-201ENST00000314355 ABT1Q9ULW3 272 aaKnown RBP16.18■□□□□ 0.18
CKS2-201ENST00000314355 FANCIQ9NVI1 1328 aa16.18■□□□□ 0.18
CKS2-201ENST00000314355 VAMP4O75379 141 aa16.17■□□□□ 0.18
CKS2-201ENST00000314355 TBC1D16Q8TBP0 767 aa16.17■□□□□ 0.18
CKS2-201ENST00000314355 DNAAF4Q8WXU2 420 aa16.17■□□□□ 0.18
CKS2-201ENST00000314355 DBNDD1Q9H9R9 158 aa16.17■□□□□ 0.18
CKS2-201ENST00000314355 PODXL2Q9NZ53 605 aa16.17■□□□□ 0.18
CKS2-201ENST00000314355 POLLQ9UGP5 575 aa16.17■□□□□ 0.18
CKS2-201ENST00000314355 CEP350Q5VT06 3117 aa16.17■□□□□ 0.18
CKS2-201ENST00000314355 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 ECE2O60344 883 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 UFL1O94874 794 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 ATP2B4P23634 1241 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 RPS12P25398 132 aaKnown RBP16.16■□□□□ 0.18
CKS2-201ENST00000314355 IGHMBP2P38935 993 aaKnown RBP16.16■□□□□ 0.18
CKS2-201ENST00000314355 CTSWP56202 376 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 DOK7Q18PE1 504 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 PAXIP1Q6ZW49 1069 aaPredicted RBP16.16■□□□□ 0.18
CKS2-201ENST00000314355 SLC51AQ86UW1 340 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 ZC3H15Q8WU90 426 aaKnown RBP16.16■□□□□ 0.18
CKS2-201ENST00000314355 DPF2Q92785 391 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 AIDAQ96BJ3 306 aa16.16■□□□□ 0.18
CKS2-201ENST00000314355 IGKV5-2P06315 115 aa16.15■□□□□ 0.18
CKS2-201ENST00000314355 CWF19L2Q2TBE0 894 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms