RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 RTKN2Q8IZC4 609 aa14.5□□□□□ -0.09
CLCC1-201ENST00000302500 CELF1Q92879 486 aaKnown RBP14.5□□□□□ -0.09
CLCC1-201ENST00000302500 RBM17Q96I25 401 aaKnown RBP14.5□□□□□ -0.09
CLCC1-201ENST00000302500 ZNF277Q9NRM2 450 aaPredicted RBP14.5□□□□□ -0.09
CLCC1-201ENST00000302500 SCN9AQ15858 1988 aa14.5□□□□□ -0.09
CLCC1-201ENST00000302500 GRAPQ13588 217 aa14.49□□□□□ -0.09
CLCC1-201ENST00000302500 CWF19L2Q2TBE0 894 aaKnown RBP14.49□□□□□ -0.09
CLCC1-201ENST00000302500 GRAPLQ8TC17 118 aaPredicted RBP14.49□□□□□ -0.09
CLCC1-201ENST00000302500 RPGRQ92834 1020 aaKnown RBP14.49□□□□□ -0.09
CLCC1-201ENST00000302500 L3MBTL3Q96JM7 780 aaPredicted RBP14.49□□□□□ -0.09
CLCC1-201ENST00000302500 CHMP4AQ9BY43 222 aa14.49□□□□□ -0.09
CLCC1-201ENST00000302500 ZNF541Q9H0D2 1346 aa14.49□□□□□ -0.09
CLCC1-201ENST00000302500 RTL9Q8NET4 1388 aa14.49□□□□□ -0.09
CLCC1-201ENST00000302500 H7C1W4 665 aa14.48□□□□□ -0.09
CLCC1-201ENST00000302500 IRS4O14654 1257 aaPredicted RBP14.48□□□□□ -0.09
CLCC1-201ENST00000302500 BBOX1O75936 387 aa14.48□□□□□ -0.09
CLCC1-201ENST00000302500 TOMM70O94826 608 aa14.48□□□□□ -0.09
CLCC1-201ENST00000302500 IARSP41252 1262 aaKnown RBP14.48□□□□□ -0.09
CLCC1-201ENST00000302500 SP8Q8IXZ3 490 aa14.48□□□□□ -0.09
CLCC1-201ENST00000302500 CDCA7LQ96GN5 454 aa14.48□□□□□ -0.09
CLCC1-201ENST00000302500 MYH16Q9H6N6 1097 aa14.48□□□□□ -0.09
CLCC1-201ENST00000302500 CWC25Q9NXE8 425 aaPredicted RBP14.48□□□□□ -0.09
CLCC1-201ENST00000302500 KDM2BQ8NHM5 1336 aa14.47□□□□□ -0.09
CLCC1-201ENST00000302500 GRIPAP1Q4V328 841 aa14.47□□□□□ -0.09
CLCC1-201ENST00000302500 DDX58O95786 925 aaKnown RBP14.46□□□□□ -0.09
CLCC1-201ENST00000302500 BEND3Q5T5X7 828 aa14.46□□□□□ -0.09
CLCC1-201ENST00000302500 JARID2Q92833 1246 aaPredicted RBP14.46□□□□□ -0.09
CLCC1-201ENST00000302500 PLA2G12BQ9BX93 195 aa14.46□□□□□ -0.09
CLCC1-201ENST00000302500 STK31Q9BXU1 1019 aa14.46□□□□□ -0.09
CLCC1-201ENST00000302500 RRAGCQ9HB90 399 aa14.46□□□□□ -0.09
CLCC1-201ENST00000302500 SEC31BQ9NQW1 1179 aa14.46□□□□□ -0.09
CLCC1-201ENST00000302500 E9PSI1 815 aa14.45□□□□□ -0.1
CLCC1-201ENST00000302500 DDNO94850 711 aaPredicted RBP14.45□□□□□ -0.1
CLCC1-201ENST00000302500 GCKRQ14397 625 aa14.45□□□□□ -0.1
CLCC1-201ENST00000302500 RTL5Q5HYW3 569 aaPredicted RBP14.45□□□□□ -0.1
CLCC1-201ENST00000302500 MIER1Q8N108 512 aa14.45□□□□□ -0.1
CLCC1-201ENST00000302500 RBM46Q8TBY0 533 aaKnown RBP14.45□□□□□ -0.1
CLCC1-201ENST00000302500 DNAAF4Q8WXU2 420 aa14.45□□□□□ -0.1
CLCC1-201ENST00000302500 F6X3S4 739 aa14.44□□□□□ -0.1
CLCC1-201ENST00000302500 PDE8AO60658 829 aa14.44□□□□□ -0.1
CLCC1-201ENST00000302500 MRPL50Q8N5N7 158 aaKnown RBP14.44□□□□□ -0.1
CLCC1-201ENST00000302500 LINS1Q8NG48 757 aa14.44□□□□□ -0.1
CLCC1-201ENST00000302500 TTLL11Q8NHH1 800 aa14.44□□□□□ -0.1
CLCC1-201ENST00000302500 VPS33BQ9H267 617 aa14.44□□□□□ -0.1
CLCC1-201ENST00000302500 CSF1RP07333 972 aa14.43□□□□□ -0.1
CLCC1-201ENST00000302500 POTEIP0CG38 1075 aa14.43□□□□□ -0.1
CLCC1-201ENST00000302500 POTEJP0CG39 1038 aa14.43□□□□□ -0.1
CLCC1-201ENST00000302500 CTSWP56202 376 aa14.43□□□□□ -0.1
CLCC1-201ENST00000302500 KIAA2012Q0VF49 1180 aa14.43□□□□□ -0.1
CLCC1-201ENST00000302500 DDX46Q7L014 1031 aaKnown RBP14.43□□□□□ -0.1
CLCC1-201ENST00000302500 TMC4Q7Z404 712 aa14.43□□□□□ -0.1
CLCC1-201ENST00000302500 PODXL2Q9NZ53 605 aa14.43□□□□□ -0.1
CLCC1-201ENST00000302500 VEGFAP15692 232 aaPredicted RBP14.42□□□□□ -0.1
CLCC1-201ENST00000302500 HSPA6P17066 643 aa14.42□□□□□ -0.1
CLCC1-201ENST00000302500 KAZALD1Q96I82 304 aa14.42□□□□□ -0.1
CLCC1-201ENST00000302500 POLLQ9UGP5 575 aa14.42□□□□□ -0.1
CLCC1-201ENST00000302500 UTYO14607 1347 aa14.42□□□□□ -0.1
CLCC1-201ENST00000302500 YDJCA8MPS7 323 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 SCNN1DP51172 638 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 RPS8P62241 208 aaKnown RBP14.41□□□□□ -0.1
CLCC1-201ENST00000302500 FOXO4P98177 505 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 FKBP5Q13451 457 aaPredicted RBP14.41□□□□□ -0.1
CLCC1-201ENST00000302500 AOC3Q16853 763 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 SSH1Q8WYL5 1049 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 ZNF609O15014 1411 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 IRS2Q9Y4H2 1338 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 WTIPA6NIX2 430 aaPredicted RBP14.41□□□□□ -0.1
CLCC1-201ENST00000302500 BRPF1P55201 1214 aaPredicted RBP14.41□□□□□ -0.1
CLCC1-201ENST00000302500 GPSM2P81274 684 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 FSTL1Q12841 308 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 MAPK8IP2Q13387 824 aaPredicted RBP14.41□□□□□ -0.1
CLCC1-201ENST00000302500 DIEXFQ68CQ4 756 aaKnown RBP14.41□□□□□ -0.1
CLCC1-201ENST00000302500 GPC2Q8N158 579 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 DNAJC5GQ8N7S2 189 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 GREM2Q9H772 168 aa14.41□□□□□ -0.1
CLCC1-201ENST00000302500 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
CLCC1-201ENST00000302500 EPHA10Q5JZY3 1008 aa14.4□□□□□ -0.1
CLCC1-201ENST00000302500 UBE3BQ7Z3V4 1068 aa14.4□□□□□ -0.1
CLCC1-201ENST00000302500 MPNDQ8N594 471 aa14.4□□□□□ -0.1
CLCC1-201ENST00000302500 TAF1DQ9H5J8 278 aaPredicted RBP14.4□□□□□ -0.1
CLCC1-201ENST00000302500 CCDC152Q4G0S7 254 aa14.39□□□□□ -0.11
CLCC1-201ENST00000302500 DPY19L2Q6NUT2 758 aa14.39□□□□□ -0.11
CLCC1-201ENST00000302500 TBC1D16Q8TBP0 767 aa14.39□□□□□ -0.11
CLCC1-201ENST00000302500 CXCL9Q07325 125 aa14.38□□□□□ -0.11
CLCC1-201ENST00000302500 NEXNQ0ZGT2 675 aa14.38□□□□□ -0.11
CLCC1-201ENST00000302500 ALDH1L2Q3SY69 923 aa14.38□□□□□ -0.11
CLCC1-201ENST00000302500 DPP8Q6V1X1 898 aaPredicted RBP14.38□□□□□ -0.11
CLCC1-201ENST00000302500 PASKQ96RG2 1323 aa14.37□□□□□ -0.11
CLCC1-201ENST00000302500 PPIP5K2O43314 1243 aa14.37□□□□□ -0.11
CLCC1-201ENST00000302500 LARGE2Q8N3Y3 721 aa14.37□□□□□ -0.11
CLCC1-201ENST00000302500 BSDC1Q9NW68 430 aaPredicted RBP14.37□□□□□ -0.11
CLCC1-201ENST00000302500 PTPRCP08575 1304 aa14.36□□□□□ -0.11
CLCC1-201ENST00000302500 GRM8O00222 908 aa14.36□□□□□ -0.11
CLCC1-201ENST00000302500 ALDH1L1O75891 902 aa14.36□□□□□ -0.11
CLCC1-201ENST00000302500 ITGBL1O95965 494 aaPredicted RBP14.36□□□□□ -0.11
CLCC1-201ENST00000302500 CT47B1P0C2W7 299 aaPredicted RBP14.36□□□□□ -0.11
CLCC1-201ENST00000302500 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
CLCC1-201ENST00000302500 FAM161AQ3B820 660 aa14.36□□□□□ -0.11
CLCC1-201ENST00000302500 SMC1BQ8NDV3 1235 aa14.36□□□□□ -0.11
CLCC1-201ENST00000302500 SUPT20HQ8NEM7 779 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms