RNA–Protein interactions for RNA: ENST00000300811.7

ZNF428-201, Transcript of zinc finger protein 428, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF428, Length 1,412 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428-201ENST00000300811 ZBED9Q6R2W3 1325 aa29.51■■■□□ 2.31
ZNF428-201ENST00000300811 FKBP4Q02790 459 aaKnown RBP eCLIP29.5■■■□□ 2.31
ZNF428-201ENST00000300811 CC2D2BQ6DHV5 1058 aa29.5■■■□□ 2.31
ZNF428-201ENST00000300811 PTPRCP08575 1304 aa29.5■■■□□ 2.31
ZNF428-201ENST00000300811 CCDC85AQ96PX6 553 aaPredicted RBP29.49■■■□□ 2.31
ZNF428-201ENST00000300811 TMX4Q9H1E5 349 aaPredicted RBP29.49■■■□□ 2.31
ZNF428-201ENST00000300811 ATP6V0A2Q9Y487 856 aa29.49■■■□□ 2.31
ZNF428-201ENST00000300811 SBF1O95248 1867 aa29.48■■■□□ 2.31
ZNF428-201ENST00000300811 CCDC152Q4G0S7 254 aa29.48■■■□□ 2.31
ZNF428-201ENST00000300811 CTSWP56202 376 aa29.47■■■□□ 2.31
ZNF428-201ENST00000300811 CELF1Q92879 486 aaKnown RBP29.47■■■□□ 2.31
ZNF428-201ENST00000300811 RARSP54136 660 aaKnown RBP29.46■■■□□ 2.31
ZNF428-201ENST00000300811 SEC31BQ9NQW1 1179 aa29.46■■■□□ 2.31
ZNF428-201ENST00000300811 ZNF277Q9NRM2 450 aaPredicted RBP29.46■■■□□ 2.31
ZNF428-201ENST00000300811 SP8Q8IXZ3 490 aa29.45■■■□□ 2.31
ZNF428-201ENST00000300811 SRCIN1Q9C0H9 1055 aa29.45■■■□□ 2.31
ZNF428-201ENST00000300811 GPBP1L1Q9HC44 474 aaPredicted RBP29.45■■■□□ 2.31
ZNF428-201ENST00000300811 ALDH1L1O75891 902 aa29.45■■■□□ 2.3
ZNF428-201ENST00000300811 CASP7P55210 303 aa29.45■■■□□ 2.3
ZNF428-201ENST00000300811 GRIPAP1Q4V328 841 aa29.45■■■□□ 2.3
ZNF428-201ENST00000300811 PSMD1Q99460 953 aa29.45■■■□□ 2.3
ZNF428-201ENST00000300811 SNED1Q8TER0 1413 aa29.44■■■□□ 2.3
ZNF428-201ENST00000300811 TMC4Q7Z404 712 aa29.43■■■□□ 2.3
ZNF428-201ENST00000300811 TTLL11Q8NHH1 800 aa29.43■■■□□ 2.3
ZNF428-201ENST00000300811 NOB1Q9ULX3 412 aaKnown RBP29.43■■■□□ 2.3
ZNF428-201ENST00000300811 RPS8P62241 208 aaKnown RBP29.42■■■□□ 2.3
ZNF428-201ENST00000300811 TAF1P21675 1872 aa29.42■■■□□ 2.3
ZNF428-201ENST00000300811 ZC3H4Q9UPT8 1303 aaKnown RBP29.41■■■□□ 2.3
ZNF428-201ENST00000300811 GRM8O00222 908 aa29.41■■■□□ 2.3
ZNF428-201ENST00000300811 PLA2G12BQ9BX93 195 aa29.41■■■□□ 2.3
ZNF428-201ENST00000300811 C9orf78Q9NZ63 289 aaPredicted RBP29.41■■■□□ 2.3
ZNF428-201ENST00000300811 COL4A1P02462 1669 aa29.41■■■□□ 2.3
ZNF428-201ENST00000300811 IARSP41252 1262 aaKnown RBP29.4■■■□□ 2.3
ZNF428-201ENST00000300811 BRPF1P55201 1214 aaPredicted RBP29.4■■■□□ 2.3
ZNF428-201ENST00000300811 CCDC88AQ3V6T2 1871 aa29.4■■■□□ 2.3
ZNF428-201ENST00000300811 DPP8Q6V1X1 898 aaPredicted RBP29.39■■■□□ 2.3
ZNF428-201ENST00000300811 MPNDQ8N594 471 aa29.39■■■□□ 2.3
ZNF428-201ENST00000300811 GREM2Q9H772 168 aa29.39■■■□□ 2.3
ZNF428-201ENST00000300811 TIAM2Q8IVF5 1701 aa29.38■■■□□ 2.29
ZNF428-201ENST00000300811 ANKRD18AQ8IVF6 992 aa29.37■■■□□ 2.29
ZNF428-201ENST00000300811 KDM2BQ8NHM5 1336 aa29.36■■■□□ 2.29
ZNF428-201ENST00000300811 CDC5LQ99459 802 aaKnown RBP29.36■■■□□ 2.29
ZNF428-201ENST00000300811 KIF16BQ96L93 1317 aa29.35■■■□□ 2.29
ZNF428-201ENST00000300811 BCAR3O75815 825 aa29.35■■■□□ 2.29
ZNF428-201ENST00000300811 SUPT20HQ8NEM7 779 aa29.35■■■□□ 2.29
ZNF428-201ENST00000300811 API5Q9BZZ5 524 aaKnown RBP29.35■■■□□ 2.29
ZNF428-201ENST00000300811 GLTPD2A6NH11 291 aa29.34■■■□□ 2.29
ZNF428-201ENST00000300811 CSF1RP07333 972 aa29.34■■■□□ 2.29
ZNF428-201ENST00000300811 FOXO4P98177 505 aa29.34■■■□□ 2.29
ZNF428-201ENST00000300811 FAM161AQ3B820 660 aa29.34■■■□□ 2.29
ZNF428-201ENST00000300811 RTFDC1Q9BY42 306 aaPredicted RBP29.34■■■□□ 2.29
ZNF428-201ENST00000300811 NSFL1CQ9UNZ2 370 aaKnown RBP29.34■■■□□ 2.29
ZNF428-201ENST00000300811 RTL9Q8NET4 1388 aa29.34■■■□□ 2.29
ZNF428-201ENST00000300811 GPSM2P81274 684 aa29.33■■■□□ 2.29
ZNF428-201ENST00000300811 DPY19L2Q6NUT2 758 aa29.33■■■□□ 2.29
ZNF428-201ENST00000300811 LARGE2Q8N3Y3 721 aa29.33■■■□□ 2.29
ZNF428-201ENST00000300811 NMRK2Q9NPI5 230 aa29.33■■■□□ 2.29
ZNF428-201ENST00000300811 DICER1Q9UPY3 1922 aaKnown RBP29.32■■■□□ 2.28
ZNF428-201ENST00000300811 PPIP5K2O43314 1243 aa29.32■■■□□ 2.28
ZNF428-201ENST00000300811 NBPF7P0C2Y1 421 aaPredicted RBP29.32■■■□□ 2.28
ZNF428-201ENST00000300811 ITGA6P23229 1130 aa29.32■■■□□ 2.28
ZNF428-201ENST00000300811 AOC3Q16853 763 aa29.32■■■□□ 2.28
ZNF428-201ENST00000300811 EPHA10Q5JZY3 1008 aa29.32■■■□□ 2.28
ZNF428-201ENST00000300811 JDP2Q8WYK2 163 aa29.32■■■□□ 2.28
ZNF428-201ENST00000300811 CHMP3Q9Y3E7 222 aa29.32■■■□□ 2.28
ZNF428-201ENST00000300811 MYH3P11055 1940 aa29.32■■■□□ 2.28
ZNF428-201ENST00000300811 FRAT1Q92837 279 aaPredicted RBP29.31■■■□□ 2.28
ZNF428-201ENST00000300811 SUCLG2Q96I99 432 aa29.31■■■□□ 2.28
ZNF428-201ENST00000300811 LRRC37AA6NMS7 1700 aa29.31■■■□□ 2.28
ZNF428-201ENST00000300811 LMBR1LQ6UX01 489 aa29.3■■■□□ 2.28
ZNF428-201ENST00000300811 ARHGAP45Q92619 1136 aa29.3■■■□□ 2.28
ZNF428-201ENST00000300811 UTYO14607 1347 aa29.3■■■□□ 2.28
ZNF428-201ENST00000300811 CCT4P50991 539 aaKnown RBP29.29■■■□□ 2.28
ZNF428-201ENST00000300811 VPS33BQ9H267 617 aa29.29■■■□□ 2.28
ZNF428-201ENST00000300811 RRAGCQ9HB90 399 aa29.29■■■□□ 2.28
ZNF428-201ENST00000300811 ANKIB1Q9P2G1 1089 aa29.29■■■□□ 2.28
ZNF428-201ENST00000300811 IGHMBP2P38935 993 aaKnown RBP29.28■■■□□ 2.28
ZNF428-201ENST00000300811 COL4A5P29400 1685 aa29.28■■■□□ 2.28
ZNF428-201ENST00000300811 ANKRD18BA2A2Z9 1011 aa29.28■■■□□ 2.28
ZNF428-201ENST00000300811 C6orf229H3BNL8 230 aa29.28■■■□□ 2.28
ZNF428-201ENST00000300811 FZD9O00144 591 aa29.28■■■□□ 2.28
ZNF428-201ENST00000300811 KIF3CO14782 793 aa29.28■■■□□ 2.28
ZNF428-201ENST00000300811 IPO8O15397 1037 aaKnown RBP29.28■■■□□ 2.28
ZNF428-201ENST00000300811 NIM1KQ8IY84 436 aa29.28■■■□□ 2.28
ZNF428-201ENST00000300811 USP44Q9H0E7 712 aa29.28■■■□□ 2.28
ZNF428-201ENST00000300811 BSDC1Q9NW68 430 aaPredicted RBP29.28■■■□□ 2.28
ZNF428-201ENST00000300811 POLLQ9UGP5 575 aa29.28■■■□□ 2.28
ZNF428-201ENST00000300811 ZNF541Q9H0D2 1346 aa29.27■■■□□ 2.28
ZNF428-201ENST00000300811 DDNO94850 711 aaPredicted RBP29.27■■■□□ 2.28
ZNF428-201ENST00000300811 DUOX1Q9NRD9 1551 aa29.26■■■□□ 2.27
ZNF428-201ENST00000300811 IFIT5Q13325 482 aaKnown RBP29.26■■■□□ 2.27
ZNF428-201ENST00000300811 KAZALD1Q96I82 304 aa29.26■■■□□ 2.27
ZNF428-201ENST00000300811 KIAA2012Q0VF49 1180 aa29.25■■■□□ 2.27
ZNF428-201ENST00000300811 TBC1D16Q8TBP0 767 aa29.25■■■□□ 2.27
ZNF428-201ENST00000300811 MPHOSPH8Q99549 860 aa29.25■■■□□ 2.27
ZNF428-201ENST00000300811 PODXL2Q9NZ53 605 aa29.25■■■□□ 2.27
ZNF428-201ENST00000300811 TRIM27P14373 513 aa29.24■■■□□ 2.27
ZNF428-201ENST00000300811 EIF6P56537 245 aaKnown RBP29.24■■■□□ 2.27
ZNF428-201ENST00000300811 WASHC4Q2M389 1173 aa29.24■■■□□ 2.27
ZNF428-201ENST00000300811 GPR101Q96P66 508 aaPredicted RBP29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms