RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 TMEM88BA6NKF7 163 aa22.66■■□□□ 1.22
CSNK1D-201ENST00000269361 COL13A1Q5TAT6 717 aaPredicted RBP22.66■■□□□ 1.22
CSNK1D-201ENST00000269361 TMC4Q7Z404 712 aa22.66■■□□□ 1.22
CSNK1D-201ENST00000269361 HSPA1AP0DMV8 641 aaKnown RBP22.65■■□□□ 1.22
CSNK1D-201ENST00000269361 HSPA1BP0DMV9 641 aaKnown RBP22.65■■□□□ 1.22
CSNK1D-201ENST00000269361 GOLGA2Q08379 1002 aa22.65■■□□□ 1.22
CSNK1D-201ENST00000269361 SF3B3Q15393 1217 aaKnown RBP22.65■■□□□ 1.22
CSNK1D-201ENST00000269361 RIC3Q7Z5B4 369 aa22.65■■□□□ 1.22
CSNK1D-201ENST00000269361 C8orf58Q8NAV2 365 aa22.65■■□□□ 1.22
CSNK1D-201ENST00000269361 PHAXQ9H814 394 aaKnown RBP22.65■■□□□ 1.22
CSNK1D-201ENST00000269361 ANKRD36CQ5JPF3 1778 aa22.64■■□□□ 1.22
CSNK1D-201ENST00000269361 CXCL9Q07325 125 aa22.64■■□□□ 1.21
CSNK1D-201ENST00000269361 KIAA2012Q0VF49 1180 aa22.64■■□□□ 1.21
CSNK1D-201ENST00000269361 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
CSNK1D-201ENST00000269361 CNTNAP1P78357 1384 aa22.63■■□□□ 1.21
CSNK1D-201ENST00000269361 IRS4O14654 1257 aaPredicted RBP22.63■■□□□ 1.21
CSNK1D-201ENST00000269361 CCDC184Q52MB2 194 aa22.63■■□□□ 1.21
CSNK1D-201ENST00000269361 USP50Q70EL3 339 aaPredicted RBP22.63■■□□□ 1.21
CSNK1D-201ENST00000269361 CELF1Q92879 486 aaKnown RBP22.62■■□□□ 1.21
CSNK1D-201ENST00000269361 CHMP4AQ9BY43 222 aa22.62■■□□□ 1.21
CSNK1D-201ENST00000269361 GPRC5DQ9NZD1 345 aa22.62■■□□□ 1.21
CSNK1D-201ENST00000269361 ADAMTSL1Q8N6G6 1762 aa22.62■■□□□ 1.21
CSNK1D-201ENST00000269361 CCDC30Q5VVM6 783 aa22.6■■□□□ 1.21
CSNK1D-201ENST00000269361 CIAPIN1Q6FI81 312 aa22.6■■□□□ 1.21
CSNK1D-201ENST00000269361 ZBTB38Q8NAP3 1195 aaPredicted RBP22.6■■□□□ 1.21
CSNK1D-201ENST00000269361 GMPSP49915 693 aaPredicted RBP22.59■■□□□ 1.21
CSNK1D-201ENST00000269361 TNIP1Q15025 636 aa22.59■■□□□ 1.21
CSNK1D-201ENST00000269361 MYD88Q99836 296 aa22.59■■□□□ 1.21
CSNK1D-201ENST00000269361 ADARB2Q9NS39 739 aaKnown RBP22.59■■□□□ 1.21
CSNK1D-201ENST00000269361 NSFL1CQ9UNZ2 370 aaKnown RBP22.59■■□□□ 1.21
CSNK1D-201ENST00000269361 LTBP1Q14766 1721 aa22.59■■□□□ 1.21
CSNK1D-201ENST00000269361 LAMB2P55268 1798 aa22.58■■□□□ 1.21
CSNK1D-201ENST00000269361 RAD17O75943 681 aa22.58■■□□□ 1.21
CSNK1D-201ENST00000269361 VEGFBP49765 207 aa22.58■■□□□ 1.21
CSNK1D-201ENST00000269361 TSPYL6Q8N831 410 aa22.58■■□□□ 1.21
CSNK1D-201ENST00000269361 CCDC191Q8NCU4 936 aa22.58■■□□□ 1.21
CSNK1D-201ENST00000269361 DDX58O95786 925 aaKnown RBP22.57■■□□□ 1.2
CSNK1D-201ENST00000269361 HSP90B1P14625 803 aaKnown RBP22.57■■□□□ 1.2
CSNK1D-201ENST00000269361 RPS8P62241 208 aaKnown RBP22.57■■□□□ 1.2
CSNK1D-201ENST00000269361 CCDC27Q2M243 656 aa22.57■■□□□ 1.2
CSNK1D-201ENST00000269361 RASSF10A6NK89 507 aa22.56■■□□□ 1.2
CSNK1D-201ENST00000269361 YDJCA8MPS7 323 aa22.56■■□□□ 1.2
CSNK1D-201ENST00000269361 GPSM2P81274 684 aa22.56■■□□□ 1.2
CSNK1D-201ENST00000269361 WASHC4Q2M389 1173 aa22.56■■□□□ 1.2
CSNK1D-201ENST00000269361 TSR2Q969E8 191 aaKnown RBP22.56■■□□□ 1.2
CSNK1D-201ENST00000269361 METTL22Q9BUU2 404 aaPredicted RBP22.56■■□□□ 1.2
CSNK1D-201ENST00000269361 BCL2L13Q9BXK5 485 aa22.56■■□□□ 1.2
CSNK1D-201ENST00000269361 CWC25Q9NXE8 425 aaPredicted RBP22.56■■□□□ 1.2
CSNK1D-201ENST00000269361 PCCAP05165 728 aaPredicted RBP22.55■■□□□ 1.2
CSNK1D-201ENST00000269361 ZEB1P37275 1124 aaPredicted RBP22.55■■□□□ 1.2
CSNK1D-201ENST00000269361 DEFB115Q30KQ5 88 aa22.55■■□□□ 1.2
CSNK1D-201ENST00000269361 WWC1Q8IX03 1113 aa22.55■■□□□ 1.2
CSNK1D-201ENST00000269361 POLLQ9UGP5 575 aa22.55■■□□□ 1.2
CSNK1D-201ENST00000269361 CDHR2Q9BYE9 1310 aa22.55■■□□□ 1.2
CSNK1D-201ENST00000269361 C6orf229H3BNL8 230 aa22.54■■□□□ 1.2
CSNK1D-201ENST00000269361 FMR1Q06787 632 aaKnown RBP eCLIP22.54■■□□□ 1.2
CSNK1D-201ENST00000269361 TNS4Q8IZW8 715 aa22.54■■□□□ 1.2
CSNK1D-201ENST00000269361 ABT1Q9ULW3 272 aaKnown RBP22.54■■□□□ 1.2
CSNK1D-201ENST00000269361 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
CSNK1D-201ENST00000269361 DDX60Q8IY21 1712 aaKnown RBP22.54■■□□□ 1.2
CSNK1D-201ENST00000269361 TRAF5O00463 557 aa22.53■■□□□ 1.2
CSNK1D-201ENST00000269361 RIMBP2O15034 1052 aa22.53■■□□□ 1.2
CSNK1D-201ENST00000269361 JARID2Q92833 1246 aaPredicted RBP22.53■■□□□ 1.2
CSNK1D-201ENST00000269361 SEC31BQ9NQW1 1179 aa22.53■■□□□ 1.2
CSNK1D-201ENST00000269361 DUOX1Q9NRD9 1551 aa22.53■■□□□ 1.2
CSNK1D-201ENST00000269361 PDE8AO60658 829 aa22.52■■□□□ 1.2
CSNK1D-201ENST00000269361 CCDC152Q4G0S7 254 aa22.52■■□□□ 1.2
CSNK1D-201ENST00000269361 KSR2Q6VAB6 950 aa22.52■■□□□ 1.2
CSNK1D-201ENST00000269361 PGAP2Q9UHJ9 254 aa22.52■■□□□ 1.2
CSNK1D-201ENST00000269361 CNOT7Q9UIV1 285 aaKnown RBP22.52■■□□□ 1.2
CSNK1D-201ENST00000269361 NCBP3Q53F19 620 aaKnown RBP22.51■■□□□ 1.19
CSNK1D-201ENST00000269361 CST9Q5W186 159 aa22.51■■□□□ 1.19
CSNK1D-201ENST00000269361 TBC1D16Q8TBP0 767 aa22.51■■□□□ 1.19
CSNK1D-201ENST00000269361 EYA3Q99504 573 aa22.51■■□□□ 1.19
CSNK1D-201ENST00000269361 STK31Q9BXU1 1019 aa22.51■■□□□ 1.19
CSNK1D-201ENST00000269361 DBNDD1Q9H9R9 158 aa22.51■■□□□ 1.19
CSNK1D-201ENST00000269361 PI4KAP2A4QPH2 592 aa22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 FOXN1O15353 648 aa22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 HIRAP54198 1017 aaPredicted RBP22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 TWISTNBQ3B726 338 aaPredicted RBP22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 PI4KAP1Q8N8J0 262 aa22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 ZC3H15Q8WU90 426 aaKnown RBP22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 MRS2Q9HD23 443 aa22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 PODXL2Q9NZ53 605 aa22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 LRRC37AA6NMS7 1700 aa22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 IL16Q14005 1332 aa22.5■■□□□ 1.19
CSNK1D-201ENST00000269361 TAF1P21675 1872 aa22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 COL4A1P02462 1669 aa22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 H7C1D1 291 aa22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 PSMD14O00487 310 aa22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 DOK7Q18PE1 504 aa22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 DPF2Q92785 391 aa22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 GPR101Q96P66 508 aaPredicted RBP22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 ZBTB12Q9Y330 459 aaPredicted RBP22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 WDR33Q9C0J8 1336 aaKnown RBP22.49■■□□□ 1.19
CSNK1D-201ENST00000269361 SHTN1A0MZ66 631 aa22.48■■□□□ 1.19
CSNK1D-201ENST00000269361 ANP32CO43423 234 aa22.48■■□□□ 1.19
CSNK1D-201ENST00000269361 IGKV5-2P06315 115 aa22.48■■□□□ 1.19
CSNK1D-201ENST00000269361 MICALL2Q8IY33 904 aa22.48■■□□□ 1.19
CSNK1D-201ENST00000269361 TRPM4Q8TD43 1214 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms