RNA–Protein interactions for RNA: ENST00000264454.7

SEC22C-201, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22C, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-201ENST00000264454 ATP5JP18859 108 aa12.16□□□□□ -0.46
SEC22C-201ENST00000264454 MCCP23508 829 aa12.16□□□□□ -0.46
SEC22C-201ENST00000264454 CTSWP56202 376 aa12.16□□□□□ -0.46
SEC22C-201ENST00000264454 TAF7LQ5H9L4 462 aa12.16□□□□□ -0.46
SEC22C-201ENST00000264454 LINC00116Q8NCU8 138 aa12.16□□□□□ -0.46
SEC22C-201ENST00000264454 TTLL11Q8NHH1 800 aa12.16□□□□□ -0.46
SEC22C-201ENST00000264454 CCDC8Q9H0W5 538 aaPredicted RBP12.16□□□□□ -0.46
SEC22C-201ENST00000264454 CEP126Q9P2H0 1117 aa12.16□□□□□ -0.46
SEC22C-201ENST00000264454 TUBGCP6Q96RT7 1819 aa12.15□□□□□ -0.46
SEC22C-201ENST00000264454 SH3TC1Q8TE82 1336 aa12.15□□□□□ -0.46
SEC22C-201ENST00000264454 COL5A3P25940 1745 aaPredicted RBP12.15□□□□□ -0.46
SEC22C-201ENST00000264454 ANKRD18BA2A2Z9 1011 aa12.15□□□□□ -0.46
SEC22C-201ENST00000264454 FAM196AQ6ZSG2 479 aa12.15□□□□□ -0.46
SEC22C-201ENST00000264454 NUP98P52948 1817 aa12.15□□□□□ -0.46
SEC22C-201ENST00000264454 RABEP1Q15276 862 aa12.14□□□□□ -0.47
SEC22C-201ENST00000264454 HSCBQ8IWL3 235 aa12.14□□□□□ -0.47
SEC22C-201ENST00000264454 TBC1D2Q9BYX2 928 aa12.14□□□□□ -0.47
SEC22C-201ENST00000264454 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
SEC22C-201ENST00000264454 UBN2Q6ZU65 1347 aa12.14□□□□□ -0.47
SEC22C-201ENST00000264454 ANAPC15P60006 121 aa12.13□□□□□ -0.47
SEC22C-201ENST00000264454 SUSD4Q5VX71 490 aa12.13□□□□□ -0.47
SEC22C-201ENST00000264454 KIF2CQ99661 725 aa12.13□□□□□ -0.47
SEC22C-201ENST00000264454 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
SEC22C-201ENST00000264454 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
SEC22C-201ENST00000264454 DBNLQ9UJU6 430 aaKnown RBP12.13□□□□□ -0.47
SEC22C-201ENST00000264454 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
SEC22C-201ENST00000264454 BTAF1O14981 1849 aa12.12□□□□□ -0.47
SEC22C-201ENST00000264454 SGSM2O43147 1006 aa12.12□□□□□ -0.47
SEC22C-201ENST00000264454 MAP4K4O95819 1239 aaPredicted RBP12.12□□□□□ -0.47
SEC22C-201ENST00000264454 ITGA6P23229 1130 aa12.12□□□□□ -0.47
SEC22C-201ENST00000264454 LRRC24Q50LG9 513 aa12.12□□□□□ -0.47
SEC22C-201ENST00000264454 KIAA1211Q6ZU35 1233 aa12.12□□□□□ -0.47
SEC22C-201ENST00000264454 KRT27Q7Z3Y8 459 aa12.12□□□□□ -0.47
SEC22C-201ENST00000264454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.12□□□□□ -0.47
SEC22C-201ENST00000264454 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
SEC22C-201ENST00000264454 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.12□□□□□ -0.47
SEC22C-201ENST00000264454 MYH14Q7Z406 1995 aaKnown RBP12.12□□□□□ -0.47
SEC22C-201ENST00000264454 RFX7Q2KHR2 1363 aa12.12□□□□□ -0.47
SEC22C-201ENST00000264454 ZPR1O75312 459 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 NTSR2O95665 410 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 SLC4A3P48751 1232 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 CCDC152Q4G0S7 254 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 LDHAL6AQ6ZMR3 332 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 IL17RAQ96F46 866 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 ZNF594Q96JF6 807 aaPredicted RBP12.11□□□□□ -0.47
SEC22C-201ENST00000264454 NEUROD6Q96NK8 337 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 NYXQ9GZU5 481 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 BOLA2Q9H3K6 86 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 ANO2Q9NQ90 1003 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 TLR7Q9NYK1 1049 aaKnown RBP12.11□□□□□ -0.47
SEC22C-201ENST00000264454 RIPOR2Q9Y4F9 1068 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 RAD50Q92878 1312 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 RTL9Q8NET4 1388 aa12.11□□□□□ -0.47
SEC22C-201ENST00000264454 A0A1B0GUL7 405 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 ADRA2BP18089 450 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
SEC22C-201ENST00000264454 SLC27A3Q5K4L6 730 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 FAM182BQ5T319 152 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 HAUS7Q99871 368 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 DBNDD2Q9BQY9 259 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 ANP32EQ9BTT0 268 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 PUS3Q9BZE2 481 aaKnown RBP12.1□□□□□ -0.47
SEC22C-201ENST00000264454 GREM2Q9H772 168 aa12.1□□□□□ -0.47
SEC22C-201ENST00000264454 GNPATO15228 680 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 ST18O60284 1047 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 LRRFIP1Q32MZ4 808 aaKnown RBP12.09□□□□□ -0.47
SEC22C-201ENST00000264454 FSD1Q9BTV5 496 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 CNNM1Q9NRU3 951 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 MROH5Q6ZUA9 1318 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 LY75O60449 1722 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 BCORQ6W2J9 1755 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 ZNF609O15014 1411 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 AK9Q5TCS8 1911 aa12.09□□□□□ -0.47
SEC22C-201ENST00000264454 TIMM10P62072 90 aa12.08□□□□□ -0.48
SEC22C-201ENST00000264454 METTL24Q5JXM2 366 aa12.08□□□□□ -0.48
SEC22C-201ENST00000264454 SLC10A5Q5PT55 438 aa12.08□□□□□ -0.48
SEC22C-201ENST00000264454 TRAPPC3LQ5T215 181 aa12.08□□□□□ -0.48
SEC22C-201ENST00000264454 GORABQ5T7V8 394 aa12.08□□□□□ -0.48
SEC22C-201ENST00000264454 CWC27Q6UX04 472 aaKnown RBP12.08□□□□□ -0.48
SEC22C-201ENST00000264454 DEFB132Q7Z7B7 95 aa12.08□□□□□ -0.48
SEC22C-201ENST00000264454 SETDB2Q96T68 719 aa12.08□□□□□ -0.48
SEC22C-201ENST00000264454 ABCC12Q96J65 1359 aa12.08□□□□□ -0.48
SEC22C-201ENST00000264454 MYH3P11055 1940 aa12.07□□□□□ -0.48
SEC22C-201ENST00000264454 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
SEC22C-201ENST00000264454 HCLS1P14317 486 aaPredicted RBP12.07□□□□□ -0.48
SEC22C-201ENST00000264454 YY1P25490 414 aa12.07□□□□□ -0.48
SEC22C-201ENST00000264454 HSPA4P34932 840 aa12.07□□□□□ -0.48
SEC22C-201ENST00000264454 MCM2P49736 904 aa12.07□□□□□ -0.48
SEC22C-201ENST00000264454 SF3B3Q15393 1217 aaKnown RBP12.07□□□□□ -0.48
SEC22C-201ENST00000264454 ZNF512BQ96KM6 892 aaPredicted RBP12.07□□□□□ -0.48
SEC22C-201ENST00000264454 CCDC85AQ96PX6 553 aaPredicted RBP12.07□□□□□ -0.48
SEC22C-201ENST00000264454 MPHOSPH8Q99549 860 aa12.07□□□□□ -0.48
SEC22C-201ENST00000264454 PDE8BO95263 885 aa12.06□□□□□ -0.48
SEC22C-201ENST00000264454 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
SEC22C-201ENST00000264454 RFC4P35249 363 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms