RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 TNIP1Q15025 636 aa15.84■□□□□ 0.13
TRAF4-202ENST00000262396 DCAF8Q5TAQ9 597 aa15.84■□□□□ 0.13
TRAF4-202ENST00000262396 TMC4Q7Z404 712 aa15.84■□□□□ 0.13
TRAF4-202ENST00000262396 ZNRF3Q9ULT6 936 aa15.84■□□□□ 0.13
TRAF4-202ENST00000262396 EPS15P42566 896 aa15.83■□□□□ 0.12
TRAF4-202ENST00000262396 GRM1Q13255 1194 aa15.83■□□□□ 0.12
TRAF4-202ENST00000262396 DEFB115Q30KQ5 88 aa15.83■□□□□ 0.12
TRAF4-202ENST00000262396 CIAPIN1Q6FI81 312 aa15.83■□□□□ 0.12
TRAF4-202ENST00000262396 USP50Q70EL3 339 aaPredicted RBP15.83■□□□□ 0.12
TRAF4-202ENST00000262396 FAM89AQ96GI7 184 aa15.83■□□□□ 0.12
TRAF4-202ENST00000262396 MBIPQ9NS73 344 aa15.83■□□□□ 0.12
TRAF4-202ENST00000262396 PASKQ96RG2 1323 aa15.83■□□□□ 0.12
TRAF4-202ENST00000262396 C6orf229H3BNL8 230 aa15.82■□□□□ 0.12
TRAF4-202ENST00000262396 ITGBL1O95965 494 aaPredicted RBP15.82■□□□□ 0.12
TRAF4-202ENST00000262396 ADARB2Q9NS39 739 aaKnown RBP15.82■□□□□ 0.12
TRAF4-202ENST00000262396 IFT57Q9NWB7 429 aa15.82■□□□□ 0.12
TRAF4-202ENST00000262396 NSFL1CQ9UNZ2 370 aaKnown RBP15.82■□□□□ 0.12
TRAF4-202ENST00000262396 CNTNAP1P78357 1384 aa15.82■□□□□ 0.12
TRAF4-202ENST00000262396 RAD17O75943 681 aa15.81■□□□□ 0.12
TRAF4-202ENST00000262396 DDX58O95786 925 aaKnown RBP15.81■□□□□ 0.12
TRAF4-202ENST00000262396 IRS4O14654 1257 aaPredicted RBP15.8■□□□□ 0.12
TRAF4-202ENST00000262396 VEGFBP49765 207 aa15.8■□□□□ 0.12
TRAF4-202ENST00000262396 SCNN1DP51172 638 aa15.8■□□□□ 0.12
TRAF4-202ENST00000262396 SLC51AQ86UW1 340 aa15.8■□□□□ 0.12
TRAF4-202ENST00000262396 EYA3Q99504 573 aa15.8■□□□□ 0.12
TRAF4-202ENST00000262396 BEGAINQ9BUH8 593 aa15.8■□□□□ 0.12
TRAF4-202ENST00000262396 H7C1D1 291 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 RIMBP2O15034 1052 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 GMPSP49915 693 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-202ENST00000262396 CXCL9Q07325 125 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 KIAA2012Q0VF49 1180 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 WASHC4Q2M389 1173 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 CCDC30Q5VVM6 783 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 MYD88Q99836 296 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 ISCA1Q9BUE6 129 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 RTFDC1Q9BY42 306 aaPredicted RBP15.79■□□□□ 0.12
TRAF4-202ENST00000262396 GPRC5DQ9NZD1 345 aa15.79■□□□□ 0.12
TRAF4-202ENST00000262396 ECE1P42892 770 aa15.78■□□□□ 0.12
TRAF4-202ENST00000262396 STK31Q9BXU1 1019 aa15.78■□□□□ 0.12
TRAF4-202ENST00000262396 ZNF408Q9H9D4 720 aa15.78■□□□□ 0.12
TRAF4-202ENST00000262396 SNED1Q8TER0 1413 aa15.77■□□□□ 0.12
TRAF4-202ENST00000262396 CTCFP49711 727 aaPredicted RBP15.77■□□□□ 0.12
TRAF4-202ENST00000262396 ANKIB1Q9P2G1 1089 aa15.77■□□□□ 0.12
TRAF4-202ENST00000262396 RPS8P62241 208 aaKnown RBP15.76■□□□□ 0.11
TRAF4-202ENST00000262396 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-202ENST00000262396 SF3B3Q15393 1217 aaKnown RBP15.76■□□□□ 0.11
TRAF4-202ENST00000262396 CCDC152Q4G0S7 254 aa15.76■□□□□ 0.11
TRAF4-202ENST00000262396 ZBTB38Q8NAP3 1195 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-202ENST00000262396 CELF1Q92879 486 aaKnown RBP15.76■□□□□ 0.11
TRAF4-202ENST00000262396 ZC3H12CQ9C0D7 883 aaKnown RBP15.76■□□□□ 0.11
TRAF4-202ENST00000262396 PHAXQ9H814 394 aaKnown RBP15.76■□□□□ 0.11
TRAF4-202ENST00000262396 CWC25Q9NXE8 425 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-202ENST00000262396 WDR33Q9C0J8 1336 aaKnown RBP15.75■□□□□ 0.11
TRAF4-202ENST00000262396 RASSF10A6NK89 507 aa15.75■□□□□ 0.11
TRAF4-202ENST00000262396 TRAF5O00463 557 aa15.75■□□□□ 0.11
TRAF4-202ENST00000262396 FOXN1O15353 648 aa15.75■□□□□ 0.11
TRAF4-202ENST00000262396 NEXNQ0ZGT2 675 aa15.75■□□□□ 0.11
TRAF4-202ENST00000262396 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
TRAF4-202ENST00000262396 DBNDD1Q9H9R9 158 aa15.75■□□□□ 0.11
TRAF4-202ENST00000262396 CNOT7Q9UIV1 285 aaKnown RBP15.75■□□□□ 0.11
TRAF4-202ENST00000262396 CDHR2Q9BYE9 1310 aa15.74■□□□□ 0.11
TRAF4-202ENST00000262396 COL4A5P29400 1685 aa15.74■□□□□ 0.11
TRAF4-202ENST00000262396 CELF2O95319 508 aaKnown RBP15.74■□□□□ 0.11
TRAF4-202ENST00000262396 ZNF853P0CG23 659 aa15.74■□□□□ 0.11
TRAF4-202ENST00000262396 CCDC191Q8NCU4 936 aa15.74■□□□□ 0.11
TRAF4-202ENST00000262396 CCDC85AQ96PX6 553 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-202ENST00000262396 ANKRD36CQ5JPF3 1778 aa15.74■□□□□ 0.11
TRAF4-202ENST00000262396 GPSM2P81274 684 aa15.73■□□□□ 0.11
TRAF4-202ENST00000262396 DOK7Q18PE1 504 aa15.73■□□□□ 0.11
TRAF4-202ENST00000262396 RBM26Q5T8P6 1007 aaKnown RBP15.73■□□□□ 0.11
TRAF4-202ENST00000262396 MICALL2Q8IY33 904 aa15.73■□□□□ 0.11
TRAF4-202ENST00000262396 C8orf58Q8NAV2 365 aa15.73■□□□□ 0.11
TRAF4-202ENST00000262396 CAPNS2Q96L46 248 aa15.73■□□□□ 0.11
TRAF4-202ENST00000262396 ECE2O60344 883 aa15.72■□□□□ 0.11
TRAF4-202ENST00000262396 PDE8AO60658 829 aa15.72■□□□□ 0.11
TRAF4-202ENST00000262396 UFL1O94874 794 aa15.72■□□□□ 0.11
TRAF4-202ENST00000262396 FMR1Q06787 632 aaKnown RBP eCLIP15.72■□□□□ 0.11
TRAF4-202ENST00000262396 CDC37L1Q7L3B6 337 aa15.72■□□□□ 0.11
TRAF4-202ENST00000262396 ANKRD18AQ8IVF6 992 aa15.72■□□□□ 0.11
TRAF4-202ENST00000262396 ZC3H15Q8WU90 426 aaKnown RBP15.72■□□□□ 0.11
TRAF4-202ENST00000262396 JARID2Q92833 1246 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-202ENST00000262396 GPR101Q96P66 508 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-202ENST00000262396 GLIS2Q9BZE0 524 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-202ENST00000262396 GGA1Q9UJY5 639 aa15.72■□□□□ 0.11
TRAF4-202ENST00000262396 MAP3K2Q9Y2U5 619 aa15.72■□□□□ 0.11
TRAF4-202ENST00000262396 ZBTB12Q9Y330 459 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-202ENST00000262396 PSMD14O00487 310 aa15.71■□□□□ 0.11
TRAF4-202ENST00000262396 ANP32CO43423 234 aa15.71■□□□□ 0.11
TRAF4-202ENST00000262396 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-202ENST00000262396 ZEB1P37275 1124 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-202ENST00000262396 LBX1P52954 281 aa15.71■□□□□ 0.11
TRAF4-202ENST00000262396 CYP4F22Q6NT55 531 aa15.71■□□□□ 0.11
TRAF4-202ENST00000262396 METTL22Q9BUU2 404 aaPredicted RBP15.71■□□□□ 0.11
TRAF4-202ENST00000262396 PRDM10Q9NQV6 1147 aa15.71■□□□□ 0.11
TRAF4-202ENST00000262396 WBP1LQ9NX94 342 aa15.71■□□□□ 0.11
TRAF4-202ENST00000262396 TBC1D10BQ4KMP7 808 aaPredicted RBP15.7■□□□□ 0.1
TRAF4-202ENST00000262396 TBC1D16Q8TBP0 767 aa15.7■□□□□ 0.1
TRAF4-202ENST00000262396 TSR2Q969E8 191 aaKnown RBP15.7■□□□□ 0.1
TRAF4-202ENST00000262396 DCPSQ96C86 337 aaKnown RBP15.7■□□□□ 0.1
TRAF4-202ENST00000262396 CDC5LQ99459 802 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms